RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 ARHGEF10O15013 1369 aa10.24□□□□□ -0.77
SIN3A-207ENST00000566640 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.24□□□□□ -0.77
SIN3A-207ENST00000566640 ONECUT3O60422 494 aaPredicted RBP10.23□□□□□ -0.77
SIN3A-207ENST00000566640 VPS72Q15906 364 aa10.23□□□□□ -0.77
SIN3A-207ENST00000566640 SPNS2Q8IVW8 549 aa10.23□□□□□ -0.77
SIN3A-207ENST00000566640 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.23□□□□□ -0.77
SIN3A-207ENST00000566640 MARF1Q9Y4F3 1742 aaKnown RBP10.22□□□□□ -0.77
SIN3A-207ENST00000566640 HRCP23327 699 aa10.22□□□□□ -0.77
SIN3A-207ENST00000566640 PMFBP1Q8TBY8 1022 aa10.22□□□□□ -0.77
SIN3A-207ENST00000566640 STAC3Q96MF2 364 aa10.22□□□□□ -0.77
SIN3A-207ENST00000566640 POGKQ9P215 609 aa10.22□□□□□ -0.77
SIN3A-207ENST00000566640 TRPC6Q9Y210 931 aa10.22□□□□□ -0.77
SIN3A-207ENST00000566640 FAM83GA6ND36 823 aa10.21□□□□□ -0.77
SIN3A-207ENST00000566640 TRAK1Q9UPV9 953 aa10.21□□□□□ -0.77
SIN3A-207ENST00000566640 BLMP54132 1417 aaPredicted RBP10.21□□□□□ -0.78
SIN3A-207ENST00000566640 TULP4Q9NRJ4 1543 aa10.21□□□□□ -0.78
SIN3A-207ENST00000566640 WASLO00401 505 aaPredicted RBP10.2□□□□□ -0.78
SIN3A-207ENST00000566640 EIF3AQ14152 1382 aaKnown RBP10.2□□□□□ -0.78
SIN3A-207ENST00000566640 PAXIP1Q6ZW49 1069 aaPredicted RBP10.2□□□□□ -0.78
SIN3A-207ENST00000566640 SEPT12Q8IYM1 358 aa10.2□□□□□ -0.78
SIN3A-207ENST00000566640 DCAF11Q8TEB1 546 aa10.2□□□□□ -0.78
SIN3A-207ENST00000566640 HIRIP3Q9BW71 556 aaPredicted RBP10.2□□□□□ -0.78
SIN3A-207ENST00000566640 MINK1Q8N4C8 1332 aaPredicted RBP10.19□□□□□ -0.78
SIN3A-207ENST00000566640 HAP1P54257 671 aaPredicted RBP10.19□□□□□ -0.78
SIN3A-207ENST00000566640 GPRASP1Q5JY77 1395 aa10.18□□□□□ -0.78
SIN3A-207ENST00000566640 LMOD2Q6P5Q4 547 aa10.18□□□□□ -0.78
SIN3A-207ENST00000566640 CFAP44Q96MT7 982 aa10.18□□□□□ -0.78
SIN3A-207ENST00000566640 TMEM106CQ9BVX2 250 aa10.18□□□□□ -0.78
SIN3A-207ENST00000566640 KDM2AQ9Y2K7 1162 aa10.18□□□□□ -0.78
SIN3A-207ENST00000566640 ABCA3Q99758 1704 aa10.18□□□□□ -0.78
SIN3A-207ENST00000566640 TRPM3Q9HCF6 1732 aaPredicted RBP10.18□□□□□ -0.78
SIN3A-207ENST00000566640 ATP7BP35670 1465 aa10.17□□□□□ -0.78
SIN3A-207ENST00000566640 TIE1P35590 1138 aa10.17□□□□□ -0.78
SIN3A-207ENST00000566640 SPRYD3Q8NCJ5 442 aa10.17□□□□□ -0.78
SIN3A-207ENST00000566640 NWD2Q9ULI1 1742 aa10.16□□□□□ -0.78
SIN3A-207ENST00000566640 PLCH1Q4KWH8 1693 aa10.16□□□□□ -0.78
SIN3A-207ENST00000566640 ST18O60284 1047 aa10.16□□□□□ -0.78
SIN3A-207ENST00000566640 KRT27Q7Z3Y8 459 aa10.16□□□□□ -0.78
SIN3A-207ENST00000566640 DEFB132Q7Z7B7 95 aa10.16□□□□□ -0.78
SIN3A-207ENST00000566640 ALS2Q96Q42 1657 aa10.15□□□□□ -0.78
SIN3A-207ENST00000566640 CABP2Q9NPB3 220 aa10.15□□□□□ -0.78
SIN3A-207ENST00000566640 BMP2KQ9NSY1 1161 aaPredicted RBP10.15□□□□□ -0.78
SIN3A-207ENST00000566640 BTG4Q9NY30 223 aa10.15□□□□□ -0.78
SIN3A-207ENST00000566640 CCDC9Q9Y3X0 531 aaKnown RBP10.15□□□□□ -0.78
SIN3A-207ENST00000566640 RGPD8O14715 1765 aaPredicted RBP10.15□□□□□ -0.78
SIN3A-207ENST00000566640 POLR3AO14802 1390 aaPredicted RBP10.14□□□□□ -0.79
SIN3A-207ENST00000566640 SPATA31A5Q5VU36 1347 aa10.14□□□□□ -0.79
SIN3A-207ENST00000566640 SPATA31A7Q8IWB4 1347 aa10.14□□□□□ -0.79
SIN3A-207ENST00000566640 NRAPQ86VF7 1730 aa10.14□□□□□ -0.79
SIN3A-207ENST00000566640 TTLL13PA6NNM8 815 aa10.14□□□□□ -0.79
SIN3A-207ENST00000566640 GTPBP6O43824 516 aaPredicted RBP10.14□□□□□ -0.79
SIN3A-207ENST00000566640 FAM98CQ17RN3 349 aaKnown RBP10.14□□□□□ -0.79
SIN3A-207ENST00000566640 NGDNQ8NEJ9 315 aaKnown RBP10.14□□□□□ -0.79
SIN3A-207ENST00000566640 NUDT16Q96DE0 195 aaKnown RBP10.14□□□□□ -0.79
SIN3A-207ENST00000566640 ARHGEF28Q8N1W1 1705 aaKnown RBP10.13□□□□□ -0.79
SIN3A-207ENST00000566640 COL14A1Q05707 1796 aaKnown RBP10.12□□□□□ -0.79
SIN3A-207ENST00000566640 TRIM26Q12899 539 aaPredicted RBP10.12□□□□□ -0.79
SIN3A-207ENST00000566640 CRYBG1Q9Y4K1 1723 aa10.12□□□□□ -0.79
SIN3A-207ENST00000566640 KIAA0232Q92628 1395 aa10.12□□□□□ -0.79
SIN3A-207ENST00000566640 PLEKHG3A1L390 1219 aa10.11□□□□□ -0.79
SIN3A-207ENST00000566640 GOLGA2Q08379 1002 aa10.11□□□□□ -0.79
SIN3A-207ENST00000566640 SF3B2Q13435 895 aaKnown RBP10.11□□□□□ -0.79
SIN3A-207ENST00000566640 CDK19Q9BWU1 502 aa10.11□□□□□ -0.79
SIN3A-207ENST00000566640 PRDM11Q9NQV5 511 aa10.11□□□□□ -0.79
SIN3A-207ENST00000566640 THSD7AQ9UPZ6 1657 aa10.11□□□□□ -0.79
SIN3A-207ENST00000566640 ACEP12821 1306 aa10.1□□□□□ -0.79
SIN3A-207ENST00000566640 SPATA31A1Q5TZJ5 1347 aa10.1□□□□□ -0.79
SIN3A-207ENST00000566640 BRWD3Q6RI45 1802 aa10.1□□□□□ -0.79
SIN3A-207ENST00000566640 DISP2A7MBM2 1401 aa10.1□□□□□ -0.79
SIN3A-207ENST00000566640 NBPF1Q3BBV0 1214 aa10.1□□□□□ -0.79
SIN3A-207ENST00000566640 NBPF8Q3BBV2 869 aa10.1□□□□□ -0.79
SIN3A-207ENST00000566640 COLQQ9Y215 455 aaPredicted RBP10.1□□□□□ -0.79
SIN3A-207ENST00000566640 KIAA1210Q9ULL0 1709 aa10.1□□□□□ -0.79
SIN3A-207ENST00000566640 USP19O94966 1318 aa10.09□□□□□ -0.79
SIN3A-207ENST00000566640 A0A0G2JS52 829 aa10.09□□□□□ -0.79
SIN3A-207ENST00000566640 BAG6P46379 1132 aa10.09□□□□□ -0.79
SIN3A-207ENST00000566640 MYT1Q01538 1121 aa10.09□□□□□ -0.79
SIN3A-207ENST00000566640 NEUROD1Q13562 356 aa10.09□□□□□ -0.79
SIN3A-207ENST00000566640 CHRNA2Q15822 529 aa10.09□□□□□ -0.79
SIN3A-207ENST00000566640 EFCAB3Q8N7B9 438 aa10.09□□□□□ -0.79
SIN3A-207ENST00000566640 SIN3AQ96ST3 1273 aa10.09□□□□□ -0.79
SIN3A-207ENST00000566640 TOPAZ1Q8N9V7 1692 aa10.09□□□□□ -0.79
SIN3A-207ENST00000566640 FAM182BQ5T319 152 aa10.08□□□□□ -0.8
SIN3A-207ENST00000566640 TRIM35Q9UPQ4 493 aa10.08□□□□□ -0.8
SIN3A-207ENST00000566640 CPDO75976 1380 aa10.08□□□□□ -0.8
SIN3A-207ENST00000566640 TRPM1Q7Z4N2 1603 aa10.07□□□□□ -0.8
SIN3A-207ENST00000566640 NRKQ7Z2Y5 1582 aa10.07□□□□□ -0.8
SIN3A-207ENST00000566640 ZC3H6P61129 1189 aaKnown RBP10.07□□□□□ -0.8
SIN3A-207ENST00000566640 NUTM2GQ5VZR2 741 aa10.07□□□□□ -0.8
SIN3A-207ENST00000566640 BARGINQ6ZT62 677 aa10.07□□□□□ -0.8
SIN3A-207ENST00000566640 MFRPQ9BY79 579 aa10.07□□□□□ -0.8
SIN3A-207ENST00000566640 PHRF1Q9P1Y6 1649 aaKnown RBP10.07□□□□□ -0.8
SIN3A-207ENST00000566640 SSH2Q76I76 1423 aa10.07□□□□□ -0.8
SIN3A-207ENST00000566640 QRICH2Q9H0J4 1663 aa10.06□□□□□ -0.8
SIN3A-207ENST00000566640 EN1Q05925 392 aaPredicted RBP10.06□□□□□ -0.8
SIN3A-207ENST00000566640 TSHZ2Q9NRE2 1034 aa10.06□□□□□ -0.8
SIN3A-207ENST00000566640 ITSN1Q15811 1721 aa10.06□□□□□ -0.8
SIN3A-207ENST00000566640 CENPJQ9HC77 1338 aaPredicted RBP10.06□□□□□ -0.8
SIN3A-207ENST00000566640 CAMTA1Q9Y6Y1 1673 aa10.06□□□□□ -0.8
SIN3A-207ENST00000566640 BRD4O60885 1362 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms