RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 SKOR2Q2VWA4 1001 aaPredicted RBP27.05■■□□□ 1.92
SPSB3-208ENST00000566339 PTCH1Q13635 1447 aa27.05■■□□□ 1.92
SPSB3-208ENST00000566339 FAM135BQ49AJ0 1406 aa27.04■■□□□ 1.92
SPSB3-208ENST00000566339 HDGFL2Q7Z4V5 671 aaPredicted RBP27.04■■□□□ 1.92
SPSB3-208ENST00000566339 CHD1LQ86WJ1 897 aa27.04■■□□□ 1.92
SPSB3-208ENST00000566339 NUTM2DQ5VT03 806 aaPredicted RBP27.04■■□□□ 1.92
SPSB3-208ENST00000566339 SPATA31D1Q6ZQQ2 1576 aa27.03■■□□□ 1.92
SPSB3-208ENST00000566339 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.03■■□□□ 1.92
SPSB3-208ENST00000566339 SRPK2P78362 688 aaKnown RBP27.02■■□□□ 1.92
SPSB3-208ENST00000566339 KIF24Q5T7B8 1368 aa27.02■■□□□ 1.92
SPSB3-208ENST00000566339 GBP4Q96PP9 640 aa27.02■■□□□ 1.92
SPSB3-208ENST00000566339 CLCN1P35523 988 aa27.01■■□□□ 1.91
SPSB3-208ENST00000566339 GGNBP2Q9H3C7 697 aa27■■□□□ 1.91
SPSB3-208ENST00000566339 ATP7BP35670 1465 aa27■■□□□ 1.91
SPSB3-208ENST00000566339 RRAGDQ9NQL2 400 aaPredicted RBP26.99■■□□□ 1.91
SPSB3-208ENST00000566339 LRRC7Q96NW7 1537 aa26.99■■□□□ 1.91
SPSB3-208ENST00000566339 FBXO31Q5XUX0 539 aaPredicted RBP26.99■■□□□ 1.91
SPSB3-208ENST00000566339 RAB3GAP1Q15042 981 aa26.96■■□□□ 1.91
SPSB3-208ENST00000566339 CLEC17AQ6ZS10 378 aa26.95■■□□□ 1.9
SPSB3-208ENST00000566339 A2ML1A8K2U0 1454 aa26.95■■□□□ 1.9
SPSB3-208ENST00000566339 ZBTB7BO15156 539 aaPredicted RBP26.94■■□□□ 1.9
SPSB3-208ENST00000566339 STRCQ7RTU9 1775 aa26.94■■□□□ 1.9
SPSB3-208ENST00000566339 IFT57Q9NWB7 429 aa26.94■■□□□ 1.9
SPSB3-208ENST00000566339 GNAI1P63096 354 aa26.93■■□□□ 1.9
SPSB3-208ENST00000566339 NFE2L2Q16236 605 aa26.93■■□□□ 1.9
SPSB3-208ENST00000566339 PRAM1Q96QH2 718 aa26.93■■□□□ 1.9
SPSB3-208ENST00000566339 GRPEL1Q9HAV7 217 aa26.93■■□□□ 1.9
SPSB3-208ENST00000566339 MRPL50Q8N5N7 158 aaKnown RBP26.92■■□□□ 1.9
SPSB3-208ENST00000566339 ABCC4O15439 1325 aa26.92■■□□□ 1.9
SPSB3-208ENST00000566339 HSP90AB1P08238 724 aaKnown RBP26.92■■□□□ 1.9
SPSB3-208ENST00000566339 LMOD3Q0VAK6 560 aa26.91■■□□□ 1.9
SPSB3-208ENST00000566339 STK26Q9P289 416 aa26.91■■□□□ 1.9
SPSB3-208ENST00000566339 NRXN3Q9Y4C0 1643 aa26.91■■□□□ 1.9
SPSB3-208ENST00000566339 KNDC1Q76NI1 1749 aa26.9■■□□□ 1.9
SPSB3-208ENST00000566339 UBE2Q2Q8WVN8 375 aa26.9■■□□□ 1.9
SPSB3-208ENST00000566339 LNPKQ9C0E8 428 aa26.9■■□□□ 1.9
SPSB3-208ENST00000566339 VAMP4O75379 141 aa26.89■■□□□ 1.9
SPSB3-208ENST00000566339 SAFB2Q14151 953 aaKnown RBP eCLIP26.89■■□□□ 1.9
SPSB3-208ENST00000566339 SPRYD3Q8NCJ5 442 aa26.89■■□□□ 1.9
SPSB3-208ENST00000566339 IBTKQ9P2D0 1353 aaPredicted RBP26.89■■□□□ 1.9
SPSB3-208ENST00000566339 MINK1Q8N4C8 1332 aaPredicted RBP26.89■■□□□ 1.89
SPSB3-208ENST00000566339 TNPO1Q92973 898 aaKnown RBP26.89■■□□□ 1.89
SPSB3-208ENST00000566339 API5Q9BZZ5 524 aaKnown RBP26.89■■□□□ 1.89
SPSB3-208ENST00000566339 TNRQ92752 1358 aa26.88■■□□□ 1.89
SPSB3-208ENST00000566339 CEP170BQ9Y4F5 1589 aaPredicted RBP26.88■■□□□ 1.89
SPSB3-208ENST00000566339 CDK12Q9NYV4 1490 aaPredicted RBP26.88■■□□□ 1.89
SPSB3-208ENST00000566339 ZNF853P0CG23 659 aa26.88■■□□□ 1.89
SPSB3-208ENST00000566339 K7ELQ4 463 aaPredicted RBP26.87■■□□□ 1.89
SPSB3-208ENST00000566339 AATKQ6ZMQ8 1374 aa26.87■■□□□ 1.89
SPSB3-208ENST00000566339 KIF2CQ99661 725 aa26.86■■□□□ 1.89
SPSB3-208ENST00000566339 ZNF142P52746 1687 aaPredicted RBP26.86■■□□□ 1.89
SPSB3-208ENST00000566339 PRKAR2BP31323 418 aa26.85■■□□□ 1.89
SPSB3-208ENST00000566339 HAP1P54257 671 aaPredicted RBP26.85■■□□□ 1.89
SPSB3-208ENST00000566339 RIMS2Q9UQ26 1411 aa26.85■■□□□ 1.89
SPSB3-208ENST00000566339 CDC45O75419 566 aa26.84■■□□□ 1.89
SPSB3-208ENST00000566339 ANKRD45Q5TZF3 282 aa26.84■■□□□ 1.89
SPSB3-208ENST00000566339 CDK19Q9BWU1 502 aa26.84■■□□□ 1.89
SPSB3-208ENST00000566339 GOLGA6L22H0YM25 854 aa26.84■■□□□ 1.89
SPSB3-208ENST00000566339 GZF1Q9H116 711 aaPredicted RBP26.84■■□□□ 1.89
SPSB3-208ENST00000566339 ILDR1Q86SU0 546 aaPredicted RBP26.83■■□□□ 1.89
SPSB3-208ENST00000566339 POLKQ9UBT6 870 aa26.83■■□□□ 1.89
SPSB3-208ENST00000566339 CPSF1Q10570 1443 aaKnown RBP26.82■■□□□ 1.88
SPSB3-208ENST00000566339 EDC4Q6P2E9 1401 aaKnown RBP26.81■■□□□ 1.88
SPSB3-208ENST00000566339 NCKAP5LQ9HCH0 1330 aa26.81■■□□□ 1.88
SPSB3-208ENST00000566339 MON2Q7Z3U7 1717 aa26.81■■□□□ 1.88
SPSB3-208ENST00000566339 TBC1D9Q6ZT07 1266 aa26.81■■□□□ 1.88
SPSB3-208ENST00000566339 PANK2Q9BZ23 570 aa26.81■■□□□ 1.88
SPSB3-208ENST00000566339 RABEP1Q15276 862 aa26.79■■□□□ 1.88
SPSB3-208ENST00000566339 MAP2P11137 1827 aaKnown RBP26.79■■□□□ 1.88
SPSB3-208ENST00000566339 CABP1Q9NZU7 370 aa26.78■■□□□ 1.88
SPSB3-208ENST00000566339 AKAP12Q02952 1782 aa26.77■■□□□ 1.88
SPSB3-208ENST00000566339 HSP90AA1P07900 732 aaKnown RBP26.77■■□□□ 1.88
SPSB3-208ENST00000566339 ESPNB1AK53 854 aa26.76■■□□□ 1.88
SPSB3-208ENST00000566339 CPS1P31327 1500 aa26.76■■□□□ 1.87
SPSB3-208ENST00000566339 IL13P35225 146 aa26.76■■□□□ 1.87
SPSB3-208ENST00000566339 TECPR2O15040 1411 aa26.76■■□□□ 1.87
SPSB3-208ENST00000566339 DCTPP1Q9H773 170 aa26.75■■□□□ 1.87
SPSB3-208ENST00000566339 NUCB2P80303 420 aa26.74■■□□□ 1.87
SPSB3-208ENST00000566339 KLHL40Q2TBA0 621 aa26.74■■□□□ 1.87
SPSB3-208ENST00000566339 TWISTNBQ3B726 338 aaPredicted RBP26.74■■□□□ 1.87
SPSB3-208ENST00000566339 SIRT2Q8IXJ6 389 aa26.74■■□□□ 1.87
SPSB3-208ENST00000566339 TRIM44Q96DX7 344 aaPredicted RBP26.74■■□□□ 1.87
SPSB3-208ENST00000566339 CCDC173Q0VFZ6 552 aa26.73■■□□□ 1.87
SPSB3-208ENST00000566339 MBIPQ9NS73 344 aa26.73■■□□□ 1.87
SPSB3-208ENST00000566339 INTS3Q68E01 1043 aaKnown RBP26.72■■□□□ 1.87
SPSB3-208ENST00000566339 PPP1R9BQ96SB3 815 aa26.71■■□□□ 1.87
SPSB3-208ENST00000566339 CWC22Q9HCG8 908 aaKnown RBP26.71■■□□□ 1.87
SPSB3-208ENST00000566339 RPAP2Q8IXW5 612 aaPredicted RBP26.71■■□□□ 1.87
SPSB3-208ENST00000566339 STAG3Q9UJ98 1225 aa26.71■■□□□ 1.87
SPSB3-208ENST00000566339 ITSN1Q15811 1721 aa26.71■■□□□ 1.87
SPSB3-208ENST00000566339 THEMISQ8N1K5 641 aaPredicted RBP26.7■■□□□ 1.86
SPSB3-208ENST00000566339 PHACTR3Q96KR7 559 aa26.69■■□□□ 1.86
SPSB3-208ENST00000566339 TTC22Q5TAA0 569 aa26.69■■□□□ 1.86
SPSB3-208ENST00000566339 PLEKHM2Q8IWE5 1019 aa26.69■■□□□ 1.86
SPSB3-208ENST00000566339 SIRT1Q96EB6 747 aa26.69■■□□□ 1.86
SPSB3-208ENST00000566339 NRKQ7Z2Y5 1582 aa26.68■■□□□ 1.86
SPSB3-208ENST00000566339 CERKQ8TCT0 537 aa26.68■■□□□ 1.86
SPSB3-208ENST00000566339 TSPYL6Q8N831 410 aa26.67■■□□□ 1.86
SPSB3-208ENST00000566339 ANKRD44Q8N8A2 993 aa26.67■■□□□ 1.86
SPSB3-208ENST00000566339 CASC1Q6TDU7 716 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms