RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 RGPD1P0DJD0 1748 aa11.63□□□□□ -0.55
LSM3P5-201ENST00000566307 PEAK1Q9H792 1746 aa11.63□□□□□ -0.55
LSM3P5-201ENST00000566307 IL16Q14005 1332 aa11.63□□□□□ -0.55
LSM3P5-201ENST00000566307 SPDYE4A6NLX3 237 aa11.63□□□□□ -0.55
LSM3P5-201ENST00000566307 CDCA7LQ96GN5 454 aa11.63□□□□□ -0.55
LSM3P5-201ENST00000566307 RSPH6AQ9H0K4 717 aa11.63□□□□□ -0.55
LSM3P5-201ENST00000566307 FLT4P35916 1363 aa11.63□□□□□ -0.55
LSM3P5-201ENST00000566307 TRPM3Q9HCF6 1732 aaPredicted RBP11.63□□□□□ -0.55
LSM3P5-201ENST00000566307 MAPK8IP3Q9UPT6 1336 aa11.61□□□□□ -0.55
LSM3P5-201ENST00000566307 SLIT3O75094 1523 aa11.61□□□□□ -0.55
LSM3P5-201ENST00000566307 U2SURPO15042 1029 aaKnown RBP11.61□□□□□ -0.55
LSM3P5-201ENST00000566307 HSPA2P54652 639 aa11.61□□□□□ -0.55
LSM3P5-201ENST00000566307 CADPS2Q86UW7 1296 aa11.61□□□□□ -0.55
LSM3P5-201ENST00000566307 SALL2Q9Y467 1007 aaPredicted RBP11.61□□□□□ -0.55
LSM3P5-201ENST00000566307 ARHGEF10O15013 1369 aa11.61□□□□□ -0.55
LSM3P5-201ENST00000566307 NFAT5O94916 1531 aa11.6□□□□□ -0.55
LSM3P5-201ENST00000566307 CT47B1P0C2W7 299 aaPredicted RBP11.6□□□□□ -0.55
LSM3P5-201ENST00000566307 TMPOP42166 694 aaKnown RBP11.6□□□□□ -0.55
LSM3P5-201ENST00000566307 RRP1P56182 461 aaKnown RBP11.6□□□□□ -0.55
LSM3P5-201ENST00000566307 ESCO1Q5FWF5 840 aa11.6□□□□□ -0.55
LSM3P5-201ENST00000566307 C14orf37Q86TY3 774 aa11.6□□□□□ -0.55
LSM3P5-201ENST00000566307 XIRP1Q702N8 1843 aaKnown RBP11.6□□□□□ -0.55
LSM3P5-201ENST00000566307 MAP3K19Q56UN5 1328 aa11.6□□□□□ -0.55
LSM3P5-201ENST00000566307 KDRP35968 1356 aa11.59□□□□□ -0.55
LSM3P5-201ENST00000566307 MSH6P52701 1360 aa11.59□□□□□ -0.55
LSM3P5-201ENST00000566307 NEFMP07197 916 aa11.59□□□□□ -0.55
LSM3P5-201ENST00000566307 NLRP6P59044 892 aa11.59□□□□□ -0.55
LSM3P5-201ENST00000566307 RRS1Q15050 365 aaKnown RBP11.59□□□□□ -0.55
LSM3P5-201ENST00000566307 CHRDL2Q6WN34 429 aa11.59□□□□□ -0.55
LSM3P5-201ENST00000566307 KCNH5Q8NCM2 988 aa11.59□□□□□ -0.55
LSM3P5-201ENST00000566307 PPP4R2Q9NY27 417 aa11.59□□□□□ -0.55
LSM3P5-201ENST00000566307 USP19O94966 1318 aa11.59□□□□□ -0.55
LSM3P5-201ENST00000566307 ATF3P18847 181 aa11.58□□□□□ -0.56
LSM3P5-201ENST00000566307 FBLN1P23142 703 aa11.58□□□□□ -0.56
LSM3P5-201ENST00000566307 PSME1Q06323 249 aa11.58□□□□□ -0.56
LSM3P5-201ENST00000566307 EIF4A2Q14240 407 aaKnown RBP11.58□□□□□ -0.56
LSM3P5-201ENST00000566307 ABTB2Q8N961 1025 aa11.58□□□□□ -0.56
LSM3P5-201ENST00000566307 MYH16Q9H6N6 1097 aa11.58□□□□□ -0.56
LSM3P5-201ENST00000566307 ALS2Q96Q42 1657 aa11.58□□□□□ -0.56
LSM3P5-201ENST00000566307 ABCC6O95255 1503 aa11.57□□□□□ -0.56
LSM3P5-201ENST00000566307 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
LSM3P5-201ENST00000566307 PRKAR2BP31323 418 aa11.57□□□□□ -0.56
LSM3P5-201ENST00000566307 LMOD3Q0VAK6 560 aa11.57□□□□□ -0.56
LSM3P5-201ENST00000566307 NFE2L2Q16236 605 aa11.57□□□□□ -0.56
LSM3P5-201ENST00000566307 ORAI2Q96SN7 254 aa11.57□□□□□ -0.56
LSM3P5-201ENST00000566307 TRIM35Q9UPQ4 493 aa11.57□□□□□ -0.56
LSM3P5-201ENST00000566307 CALD1Q05682 793 aaKnown RBP11.56□□□□□ -0.56
LSM3P5-201ENST00000566307 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
LSM3P5-201ENST00000566307 PELP1Q8IZL8 1130 aaKnown RBP11.56□□□□□ -0.56
LSM3P5-201ENST00000566307 IGSF1Q8N6C5 1336 aa11.56□□□□□ -0.56
LSM3P5-201ENST00000566307 MED1Q15648 1581 aaPredicted RBP11.55□□□□□ -0.56
LSM3P5-201ENST00000566307 SENP3-EIF4A1A0A087X0R7 540 aa11.55□□□□□ -0.56
LSM3P5-201ENST00000566307 HSP90AB2PQ58FF8 381 aa11.55□□□□□ -0.56
LSM3P5-201ENST00000566307 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.55□□□□□ -0.56
LSM3P5-201ENST00000566307 RBM33Q96EV2 1170 aaKnown RBP11.55□□□□□ -0.56
LSM3P5-201ENST00000566307 NPHP3Q7Z494 1330 aa11.55□□□□□ -0.56
LSM3P5-201ENST00000566307 LTN1O94822 1766 aa11.54□□□□□ -0.56
LSM3P5-201ENST00000566307 HOXC9P31274 260 aa11.54□□□□□ -0.56
LSM3P5-201ENST00000566307 AMPHP49418 695 aa11.54□□□□□ -0.56
LSM3P5-201ENST00000566307 RIPK4P57078 832 aa11.54□□□□□ -0.56
LSM3P5-201ENST00000566307 KRT28Q7Z3Y7 464 aa11.54□□□□□ -0.56
LSM3P5-201ENST00000566307 ZBTB12Q9Y330 459 aaPredicted RBP11.54□□□□□ -0.56
LSM3P5-201ENST00000566307 PLEKHG2Q9H7P9 1386 aa11.54□□□□□ -0.56
LSM3P5-201ENST00000566307 NCAPD2Q15021 1401 aa11.53□□□□□ -0.56
LSM3P5-201ENST00000566307 PXDNQ92626 1479 aa11.53□□□□□ -0.56
LSM3P5-201ENST00000566307 IP6K1Q92551 441 aa11.53□□□□□ -0.56
LSM3P5-201ENST00000566307 RRP7AQ9Y3A4 280 aaKnown RBP11.53□□□□□ -0.56
LSM3P5-201ENST00000566307 FOXO3O43524 673 aa11.52□□□□□ -0.57
LSM3P5-201ENST00000566307 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
LSM3P5-201ENST00000566307 NEUROD2Q15784 382 aa11.52□□□□□ -0.57
LSM3P5-201ENST00000566307 ZNF428Q96B54 188 aa11.52□□□□□ -0.57
LSM3P5-201ENST00000566307 PHACTR3Q96KR7 559 aa11.52□□□□□ -0.57
LSM3P5-201ENST00000566307 CAMTA1Q9Y6Y1 1673 aa11.52□□□□□ -0.57
LSM3P5-201ENST00000566307 TNS3Q68CZ2 1445 aa11.52□□□□□ -0.57
LSM3P5-201ENST00000566307 DLG5Q8TDM6 1919 aa11.51□□□□□ -0.57
LSM3P5-201ENST00000566307 HMOX1P09601 288 aa11.51□□□□□ -0.57
LSM3P5-201ENST00000566307 ARHGEF25Q86VW2 580 aa11.51□□□□□ -0.57
LSM3P5-201ENST00000566307 CRYBG1Q9Y4K1 1723 aa11.5□□□□□ -0.57
LSM3P5-201ENST00000566307 HTATSF1O43719 755 aaKnown RBP11.5□□□□□ -0.57
LSM3P5-201ENST00000566307 GCP02774 474 aa11.5□□□□□ -0.57
LSM3P5-201ENST00000566307 ZNF853P0CG23 659 aa11.5□□□□□ -0.57
LSM3P5-201ENST00000566307 SULT6B1Q6IMI4 303 aa11.5□□□□□ -0.57
LSM3P5-201ENST00000566307 EYA1Q99502 592 aa11.5□□□□□ -0.57
LSM3P5-201ENST00000566307 IFT57Q9NWB7 429 aa11.5□□□□□ -0.57
LSM3P5-201ENST00000566307 ZNF335Q9H4Z2 1342 aaPredicted RBP11.5□□□□□ -0.57
LSM3P5-201ENST00000566307 FANCIQ9NVI1 1328 aa11.5□□□□□ -0.57
LSM3P5-201ENST00000566307 VASPP50552 380 aaPredicted RBP11.49□□□□□ -0.57
LSM3P5-201ENST00000566307 GNAI1P63096 354 aa11.49□□□□□ -0.57
LSM3P5-201ENST00000566307 PDE3AQ14432 1141 aa11.49□□□□□ -0.57
LSM3P5-201ENST00000566307 PROM2Q8N271 834 aa11.49□□□□□ -0.57
LSM3P5-201ENST00000566307 RARSP54136 660 aaKnown RBP11.48□□□□□ -0.57
LSM3P5-201ENST00000566307 BRPF1P55201 1214 aaPredicted RBP11.48□□□□□ -0.57
LSM3P5-201ENST00000566307 IRX6P78412 446 aaPredicted RBP11.48□□□□□ -0.57
LSM3P5-201ENST00000566307 AAMPQ13685 434 aa11.48□□□□□ -0.57
LSM3P5-201ENST00000566307 AEBP1Q8IUX7 1158 aa11.48□□□□□ -0.57
LSM3P5-201ENST00000566307 GAS2L2Q8NHY3 880 aa11.48□□□□□ -0.57
LSM3P5-201ENST00000566307 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
LSM3P5-201ENST00000566307 SOS2Q07890 1332 aaPredicted RBP11.48□□□□□ -0.57
LSM3P5-201ENST00000566307 SPATA31A3Q5VYP0 1347 aa11.48□□□□□ -0.57
LSM3P5-201ENST00000566307 CPDO75976 1380 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms