RNA–Protein interactions for RNA: ENST00000565975.5

SPNS1-207, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-207ENST00000565975 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.45■■■□□ 2.14
SPNS1-207ENST00000565975 HDAC1Q13547 482 aaPredicted RBP28.44■■■□□ 2.14
SPNS1-207ENST00000565975 USP35Q9P2H5 1018 aa28.44■■■□□ 2.14
SPNS1-207ENST00000565975 NCKAP5LQ9HCH0 1330 aa28.44■■■□□ 2.14
SPNS1-207ENST00000565975 HMOX1P09601 288 aa28.44■■■□□ 2.14
SPNS1-207ENST00000565975 LMOD3Q0VAK6 560 aa28.43■■■□□ 2.14
SPNS1-207ENST00000565975 IFT57Q9NWB7 429 aa28.43■■■□□ 2.14
SPNS1-207ENST00000565975 PLPPR3Q6T4P5 718 aa28.42■■■□□ 2.14
SPNS1-207ENST00000565975 PLEKHG3A1L390 1219 aa28.42■■■□□ 2.14
SPNS1-207ENST00000565975 GNAI1P63096 354 aa28.42■■■□□ 2.14
SPNS1-207ENST00000565975 DAXXQ9UER7 740 aaPredicted RBP28.41■■■□□ 2.14
SPNS1-207ENST00000565975 LTKP29376 864 aa28.41■■■□□ 2.14
SPNS1-207ENST00000565975 ITPRIPQ8IWB1 547 aa28.41■■■□□ 2.14
SPNS1-207ENST00000565975 SLIT1O75093 1534 aa28.4■■■□□ 2.14
SPNS1-207ENST00000565975 ZNF853P0CG23 659 aa28.4■■■□□ 2.14
SPNS1-207ENST00000565975 USP19O94966 1318 aa28.4■■■□□ 2.14
SPNS1-207ENST00000565975 ARHGAP23Q9P227 1491 aa28.39■■■□□ 2.14
SPNS1-207ENST00000565975 TTC21BQ7Z4L5 1316 aa28.39■■■□□ 2.14
SPNS1-207ENST00000565975 DEKP35659 375 aaKnown RBP28.39■■■□□ 2.13
SPNS1-207ENST00000565975 LAS1LQ9Y4W2 734 aaKnown RBP28.39■■■□□ 2.13
SPNS1-207ENST00000565975 TMEM57Q8N5G2 664 aa28.38■■■□□ 2.13
SPNS1-207ENST00000565975 OVOS2A0A0J9YW53 1432 aa28.38■■■□□ 2.13
SPNS1-207ENST00000565975 OVOS2Q6IE36 1432 aa28.38■■■□□ 2.13
SPNS1-207ENST00000565975 RRS1Q15050 365 aaKnown RBP28.37■■■□□ 2.13
SPNS1-207ENST00000565975 ZBTB40Q9NUA8 1239 aa28.37■■■□□ 2.13
SPNS1-207ENST00000565975 EID1Q9Y6B2 187 aa28.36■■■□□ 2.13
SPNS1-207ENST00000565975 USP6P35125 1406 aa28.36■■■□□ 2.13
SPNS1-207ENST00000565975 PTPRUQ92729 1446 aa28.36■■■□□ 2.13
SPNS1-207ENST00000565975 LMTK3Q96Q04 1460 aa28.35■■■□□ 2.13
SPNS1-207ENST00000565975 ARHGAP45Q92619 1136 aa28.35■■■□□ 2.13
SPNS1-207ENST00000565975 VAMP4O75379 141 aa28.35■■■□□ 2.13
SPNS1-207ENST00000565975 CEBPAP49715 358 aaPredicted RBP28.35■■■□□ 2.13
SPNS1-207ENST00000565975 ACEP12821 1306 aa28.35■■■□□ 2.13
SPNS1-207ENST00000565975 NALCNQ8IZF0 1738 aa28.34■■■□□ 2.13
SPNS1-207ENST00000565975 PTCH1Q13635 1447 aa28.34■■■□□ 2.13
SPNS1-207ENST00000565975 SMC5Q8IY18 1101 aa28.33■■■□□ 2.13
SPNS1-207ENST00000565975 PIK3R4Q99570 1358 aa28.33■■■□□ 2.13
SPNS1-207ENST00000565975 MRPL50Q8N5N7 158 aaKnown RBP28.32■■■□□ 2.12
SPNS1-207ENST00000565975 CHMP4BQ9H444 224 aaKnown RBP28.32■■■□□ 2.12
SPNS1-207ENST00000565975 DIP2AQ14689 1571 aa28.31■■■□□ 2.12
SPNS1-207ENST00000565975 DLG5Q8TDM6 1919 aa28.31■■■□□ 2.12
SPNS1-207ENST00000565975 CFAP44Q96MT7 982 aa28.31■■■□□ 2.12
SPNS1-207ENST00000565975 TBX22Q9Y458 520 aa28.31■■■□□ 2.12
SPNS1-207ENST00000565975 SSH2Q76I76 1423 aa28.31■■■□□ 2.12
SPNS1-207ENST00000565975 USP31Q70CQ4 1352 aa28.31■■■□□ 2.12
SPNS1-207ENST00000565975 THUMPD2Q9BTF0 503 aaKnown RBP28.31■■■□□ 2.12
SPNS1-207ENST00000565975 MBIPQ9NS73 344 aa28.3■■■□□ 2.12
SPNS1-207ENST00000565975 SEC24BO95487 1268 aa28.3■■■□□ 2.12
SPNS1-207ENST00000565975 SLC4A3P48751 1232 aa28.28■■■□□ 2.12
SPNS1-207ENST00000565975 EIF4A2Q14240 407 aaKnown RBP28.28■■■□□ 2.12
SPNS1-207ENST00000565975 UPF2Q9HAU5 1272 aaKnown RBP28.28■■■□□ 2.12
SPNS1-207ENST00000565975 TTC21AQ8NDW8 1320 aa28.27■■■□□ 2.12
SPNS1-207ENST00000565975 SLC26A8Q96RN1 970 aa28.26■■■□□ 2.11
SPNS1-207ENST00000565975 AMOTL2Q9Y2J4 779 aa28.25■■■□□ 2.11
SPNS1-207ENST00000565975 TSPYL6Q8N831 410 aa28.24■■■□□ 2.11
SPNS1-207ENST00000565975 RGPD1P0DJD0 1748 aa28.24■■■□□ 2.11
SPNS1-207ENST00000565975 TWISTNBQ3B726 338 aaPredicted RBP28.24■■■□□ 2.11
SPNS1-207ENST00000565975 PEAK1Q9H792 1746 aa28.23■■■□□ 2.11
SPNS1-207ENST00000565975 ABCC4O15439 1325 aa28.22■■■□□ 2.11
SPNS1-207ENST00000565975 THEMISQ8N1K5 641 aaPredicted RBP28.22■■■□□ 2.11
SPNS1-207ENST00000565975 TBC1D32Q96NH3 1257 aa28.22■■■□□ 2.11
SPNS1-207ENST00000565975 BECN1Q14457 450 aa28.21■■■□□ 2.11
SPNS1-207ENST00000565975 SETD1BQ9UPS6 1966 aaKnown RBP28.21■■■□□ 2.11
SPNS1-207ENST00000565975 ZBTB7BO15156 539 aaPredicted RBP28.2■■■□□ 2.11
SPNS1-207ENST00000565975 HSPA2P54652 639 aa28.2■■■□□ 2.11
SPNS1-207ENST00000565975 SULT6B1Q6IMI4 303 aa28.2■■■□□ 2.1
SPNS1-207ENST00000565975 API5Q9BZZ5 524 aaKnown RBP28.19■■■□□ 2.1
SPNS1-207ENST00000565975 KIF24Q5T7B8 1368 aa28.19■■■□□ 2.1
SPNS1-207ENST00000565975 XRN1Q8IZH2 1706 aaKnown RBP28.19■■■□□ 2.1
SPNS1-207ENST00000565975 HAP1P54257 671 aaPredicted RBP28.19■■■□□ 2.1
SPNS1-207ENST00000565975 NUCB1Q02818 461 aa28.19■■■□□ 2.1
SPNS1-207ENST00000565975 C8orf58Q8NAV2 365 aa28.18■■■□□ 2.1
SPNS1-207ENST00000565975 ARHGEF10O15013 1369 aa28.18■■■□□ 2.1
SPNS1-207ENST00000565975 FAM83GA6ND36 823 aa28.17■■■□□ 2.1
SPNS1-207ENST00000565975 AEBP1Q8IUX7 1158 aa28.17■■■□□ 2.1
SPNS1-207ENST00000565975 NUTM2FA1L443 756 aa28.17■■■□□ 2.1
SPNS1-207ENST00000565975 NFKBIBQ15653 356 aa28.16■■■□□ 2.1
SPNS1-207ENST00000565975 ANKARQ7Z5J8 1434 aa28.15■■■□□ 2.1
SPNS1-207ENST00000565975 GCC1Q96CN9 775 aa28.14■■■□□ 2.1
SPNS1-207ENST00000565975 SBNO1A3KN83 1393 aa28.14■■■□□ 2.09
SPNS1-207ENST00000565975 KIAA0232Q92628 1395 aa28.14■■■□□ 2.09
SPNS1-207ENST00000565975 ELL2O00472 640 aaPredicted RBP28.13■■■□□ 2.09
SPNS1-207ENST00000565975 HSP90AB2PQ58FF8 381 aa28.13■■■□□ 2.09
SPNS1-207ENST00000565975 FMN2Q9NZ56 1722 aa28.13■■■□□ 2.09
SPNS1-207ENST00000565975 CHL1O00533 1208 aa28.13■■■□□ 2.09
SPNS1-207ENST00000565975 DCTN1Q14203 1278 aa28.13■■■□□ 2.09
SPNS1-207ENST00000565975 FLT4P35916 1363 aa28.12■■■□□ 2.09
SPNS1-207ENST00000565975 CHD1LQ86WJ1 897 aa28.11■■■□□ 2.09
SPNS1-207ENST00000565975 MAP3K19Q56UN5 1328 aa28.1■■■□□ 2.09
SPNS1-207ENST00000565975 NGDNQ8NEJ9 315 aaKnown RBP28.09■■■□□ 2.09
SPNS1-207ENST00000565975 KDRP35968 1356 aa28.08■■■□□ 2.08
SPNS1-207ENST00000565975 PIK3C2AO00443 1686 aa28.07■■■□□ 2.08
SPNS1-207ENST00000565975 CRB1P82279 1406 aa28.07■■■□□ 2.08
SPNS1-207ENST00000565975 USP54Q70EL1 1684 aa28.06■■■□□ 2.08
SPNS1-207ENST00000565975 RGPD8O14715 1765 aaPredicted RBP28.05■■■□□ 2.08
SPNS1-207ENST00000565975 INTS3Q68E01 1043 aaKnown RBP28.04■■■□□ 2.08
SPNS1-207ENST00000565975 LNPKQ9C0E8 428 aa28.04■■■□□ 2.08
SPNS1-207ENST00000565975 MCM10Q7L590 875 aa28.03■■■□□ 2.08
SPNS1-207ENST00000565975 C22orf23Q9BZE7 217 aa28.03■■■□□ 2.08
SPNS1-207ENST00000565975 IGSF1Q8N6C5 1336 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms