RNA–Protein interactions for RNA: ENST00000565796.5

CDH16-204, Transcript of cadherin 16, humanhuman

TSL 2 BASIC

Gene CDH16, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-204ENST00000565796 WDR63Q8IWG1 891 aa18.34■□□□□ 0.53
CDH16-204ENST00000565796 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.53
CDH16-204ENST00000565796 NLRP6P59044 892 aa18.33■□□□□ 0.53
CDH16-204ENST00000565796 PLEKHF1Q96S99 279 aa18.33■□□□□ 0.53
CDH16-204ENST00000565796 TNNQ9UQP3 1299 aa18.33■□□□□ 0.53
CDH16-204ENST00000565796 COL3A1P02461 1466 aaPredicted RBP18.33■□□□□ 0.52
CDH16-204ENST00000565796 PIK3C2AO00443 1686 aa18.33■□□□□ 0.52
CDH16-204ENST00000565796 RARSP54136 660 aaKnown RBP18.33■□□□□ 0.52
CDH16-204ENST00000565796 COG6Q9Y2V7 657 aa18.32■□□□□ 0.52
CDH16-204ENST00000565796 OVOS2A0A0J9YW53 1432 aa18.32■□□□□ 0.52
CDH16-204ENST00000565796 OVOS2Q6IE36 1432 aa18.32■□□□□ 0.52
CDH16-204ENST00000565796 CCDC27Q2M243 656 aa18.32■□□□□ 0.52
CDH16-204ENST00000565796 BACH2Q9BYV9 841 aa18.32■□□□□ 0.52
CDH16-204ENST00000565796 SOX12O15370 315 aa18.31■□□□□ 0.52
CDH16-204ENST00000565796 ANP32AP39687 249 aaKnown RBP18.31■□□□□ 0.52
CDH16-204ENST00000565796 CENPQQ7L2Z9 268 aaPredicted RBP18.31■□□□□ 0.52
CDH16-204ENST00000565796 TSR2Q969E8 191 aaKnown RBP18.31■□□□□ 0.52
CDH16-204ENST00000565796 NPHP3Q7Z494 1330 aa18.3■□□□□ 0.52
CDH16-204ENST00000565796 MS4A1P11836 297 aa18.3■□□□□ 0.52
CDH16-204ENST00000565796 LMOD2Q6P5Q4 547 aa18.3■□□□□ 0.52
CDH16-204ENST00000565796 DIAPH1O60610 1272 aaKnown RBP18.3■□□□□ 0.52
CDH16-204ENST00000565796 TMPOP42166 694 aaKnown RBP18.3■□□□□ 0.52
CDH16-204ENST00000565796 USP31Q70CQ4 1352 aa18.29■□□□□ 0.52
CDH16-204ENST00000565796 POLKQ9UBT6 870 aa18.29■□□□□ 0.52
CDH16-204ENST00000565796 TRIM35Q9UPQ4 493 aa18.29■□□□□ 0.52
CDH16-204ENST00000565796 MAP2P11137 1827 aaKnown RBP18.29■□□□□ 0.52
CDH16-204ENST00000565796 RRS1Q15050 365 aaKnown RBP18.28■□□□□ 0.52
CDH16-204ENST00000565796 MAPK8IP3Q9UPT6 1336 aa18.28■□□□□ 0.52
CDH16-204ENST00000565796 RLBP1P12271 317 aa18.27■□□□□ 0.52
CDH16-204ENST00000565796 PDE3AQ14432 1141 aa18.27■□□□□ 0.52
CDH16-204ENST00000565796 NOP58Q9Y2X3 529 aaKnown RBP18.27■□□□□ 0.52
CDH16-204ENST00000565796 EMILIN1Q9Y6C2 1016 aa18.27■□□□□ 0.52
CDH16-204ENST00000565796 PLEKHG5O94827 1062 aa18.27■□□□□ 0.52
CDH16-204ENST00000565796 IGHDP01880 384 aa18.27■□□□□ 0.52
CDH16-204ENST00000565796 AATKQ6ZMQ8 1374 aa18.27■□□□□ 0.51
CDH16-204ENST00000565796 TRPM3Q9HCF6 1732 aaPredicted RBP18.27■□□□□ 0.51
CDH16-204ENST00000565796 CLUAP1Q96AJ1 413 aa18.26■□□□□ 0.51
CDH16-204ENST00000565796 IPO9Q96P70 1041 aaKnown RBP18.26■□□□□ 0.51
CDH16-204ENST00000565796 MYH16Q9H6N6 1097 aa18.26■□□□□ 0.51
CDH16-204ENST00000565796 PNPLA6Q8IY17 1366 aa18.26■□□□□ 0.51
CDH16-204ENST00000565796 RGS3P49796 1198 aa18.26■□□□□ 0.51
CDH16-204ENST00000565796 RIPK4P57078 832 aa18.25■□□□□ 0.51
CDH16-204ENST00000565796 MARF1Q9Y4F3 1742 aaKnown RBP18.25■□□□□ 0.51
CDH16-204ENST00000565796 PXDNQ92626 1479 aa18.24■□□□□ 0.51
CDH16-204ENST00000565796 HMOX1P09601 288 aa18.24■□□□□ 0.51
CDH16-204ENST00000565796 EXOSC9Q06265 439 aaKnown RBP18.24■□□□□ 0.51
CDH16-204ENST00000565796 PRKAR2BP31323 418 aa18.22■□□□□ 0.51
CDH16-204ENST00000565796 SBNO1A3KN83 1393 aa18.22■□□□□ 0.51
CDH16-204ENST00000565796 USP54Q70EL1 1684 aa18.22■□□□□ 0.51
CDH16-204ENST00000565796 ALS2Q96Q42 1657 aa18.21■□□□□ 0.51
CDH16-204ENST00000565796 NCBP3Q53F19 620 aaKnown RBP18.21■□□□□ 0.51
CDH16-204ENST00000565796 PHACTR3Q96KR7 559 aa18.2■□□□□ 0.5
CDH16-204ENST00000565796 TNS3Q68CZ2 1445 aa18.2■□□□□ 0.5
CDH16-204ENST00000565796 SOS2Q07890 1332 aaPredicted RBP18.2■□□□□ 0.5
CDH16-204ENST00000565796 MAP3K19Q56UN5 1328 aa18.2■□□□□ 0.5
CDH16-204ENST00000565796 SPATA31A3Q5VYP0 1347 aa18.2■□□□□ 0.5
CDH16-204ENST00000565796 RSPH6AQ9H0K4 717 aa18.2■□□□□ 0.5
CDH16-204ENST00000565796 ROBO1Q9Y6N7 1651 aa18.2■□□□□ 0.5
CDH16-204ENST00000565796 TOM1O60784 492 aa18.18■□□□□ 0.5
CDH16-204ENST00000565796 FCHSD2O94868 740 aa18.18■□□□□ 0.5
CDH16-204ENST00000565796 ZBTB47Q9UFB7 747 aaPredicted RBP18.18■□□□□ 0.5
CDH16-204ENST00000565796 CDK12Q9NYV4 1490 aaPredicted RBP18.18■□□□□ 0.5
CDH16-204ENST00000565796 GCP02774 474 aa18.18■□□□□ 0.5
CDH16-204ENST00000565796 PIP4K2BP78356 416 aa18.18■□□□□ 0.5
CDH16-204ENST00000565796 KCNH5Q8NCM2 988 aa18.18■□□□□ 0.5
CDH16-204ENST00000565796 THUMPD2Q9BTF0 503 aaKnown RBP18.18■□□□□ 0.5
CDH16-204ENST00000565796 PCDHB15Q9Y5E8 787 aa18.18■□□□□ 0.5
CDH16-204ENST00000565796 NHSL1Q5SYE7 1610 aa18.18■□□□□ 0.5
CDH16-204ENST00000565796 AMPHP49418 695 aa18.17■□□□□ 0.5
CDH16-204ENST00000565796 SSH1Q8WYL5 1049 aa18.17■□□□□ 0.5
CDH16-204ENST00000565796 SMC4Q9NTJ3 1288 aa18.17■□□□□ 0.5
CDH16-204ENST00000565796 HSP90AB2PQ58FF8 381 aa18.16■□□□□ 0.5
CDH16-204ENST00000565796 PEAK1Q9H792 1746 aa18.16■□□□□ 0.5
CDH16-204ENST00000565796 USP19O94966 1318 aa18.16■□□□□ 0.5
CDH16-204ENST00000565796 UBAP1LF5GYI3 381 aa18.16■□□□□ 0.5
CDH16-204ENST00000565796 CABLES1Q8TDN4 633 aa18.16■□□□□ 0.5
CDH16-204ENST00000565796 ZBTB7CA1YPR0 619 aa18.16■□□□□ 0.5
CDH16-204ENST00000565796 IL13P35225 146 aa18.16■□□□□ 0.5
CDH16-204ENST00000565796 C8orf34Q49A92 452 aa18.16■□□□□ 0.5
CDH16-204ENST00000565796 LAS1LQ9Y4W2 734 aaKnown RBP18.16■□□□□ 0.5
CDH16-204ENST00000565796 ARHGEF10O15013 1369 aa18.15■□□□□ 0.5
CDH16-204ENST00000565796 NFAT5O94916 1531 aa18.15■□□□□ 0.5
CDH16-204ENST00000565796 SLIT3O75094 1523 aa18.14■□□□□ 0.5
CDH16-204ENST00000565796 MED1Q15648 1581 aaPredicted RBP18.14■□□□□ 0.49
CDH16-204ENST00000565796 FLT4P35916 1363 aa18.14■□□□□ 0.49
CDH16-204ENST00000565796 ZKSCAN2Q63HK3 967 aa18.14■□□□□ 0.49
CDH16-204ENST00000565796 CERKQ8TCT0 537 aa18.14■□□□□ 0.49
CDH16-204ENST00000565796 PNNQ9H307 717 aaKnown RBP18.14■□□□□ 0.49
CDH16-204ENST00000565796 LTN1O94822 1766 aa18.13■□□□□ 0.49
CDH16-204ENST00000565796 FAM161AQ3B820 660 aa18.13■□□□□ 0.49
CDH16-204ENST00000565796 TRIM27P14373 513 aa18.12■□□□□ 0.49
CDH16-204ENST00000565796 ZC3H6P61129 1189 aaKnown RBP18.12■□□□□ 0.49
CDH16-204ENST00000565796 NBR1Q14596 966 aa18.12■□□□□ 0.49
CDH16-204ENST00000565796 FTSJ3Q8IY81 847 aaKnown RBP18.12■□□□□ 0.49
CDH16-204ENST00000565796 IL16Q14005 1332 aa18.12■□□□□ 0.49
CDH16-204ENST00000565796 HOXC9P31274 260 aa18.12■□□□□ 0.49
CDH16-204ENST00000565796 EIF4A2Q14240 407 aaKnown RBP18.12■□□□□ 0.49
CDH16-204ENST00000565796 DZIP1LQ8IYY4 767 aaKnown RBP18.12■□□□□ 0.49
CDH16-204ENST00000565796 NEFMP07197 916 aa18.11■□□□□ 0.49
CDH16-204ENST00000565796 MVPQ14764 893 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms