RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-229ENST00000565580 RIOK3O14730 519 aaKnown RBP9.34□□□□□ -0.91
TCF4-229ENST00000565580 FNBP4Q8N3X1 1017 aaPredicted RBP9.34□□□□□ -0.91
TCF4-229ENST00000565580 POGKQ9P215 609 aa9.34□□□□□ -0.91
TCF4-229ENST00000565580 TAOK2Q9UL54 1235 aa9.34□□□□□ -0.91
TCF4-229ENST00000565580 PHF8Q9UPP1 1060 aa9.34□□□□□ -0.91
TCF4-229ENST00000565580 TRAK1Q9UPV9 953 aa9.34□□□□□ -0.91
TCF4-229ENST00000565580 SPATA31A3Q5VYP0 1347 aa9.33□□□□□ -0.92
TCF4-229ENST00000565580 ATRNO75882 1429 aa9.33□□□□□ -0.92
TCF4-229ENST00000565580 HOXB3P14651 431 aaPredicted RBP9.33□□□□□ -0.92
TCF4-229ENST00000565580 HOXB1P14653 301 aaPredicted RBP9.33□□□□□ -0.92
TCF4-229ENST00000565580 KRT28Q7Z3Y7 464 aa9.33□□□□□ -0.92
TCF4-229ENST00000565580 HIRIP3Q9BW71 556 aaPredicted RBP9.33□□□□□ -0.92
TCF4-229ENST00000565580 USP32Q8NFA0 1604 aa9.33□□□□□ -0.92
TCF4-229ENST00000565580 BCL9LQ86UU0 1499 aa9.33□□□□□ -0.92
TCF4-229ENST00000565580 ADGRB2O60241 1585 aa9.33□□□□□ -0.92
TCF4-229ENST00000565580 MARF1Q9Y4F3 1742 aaKnown RBP9.32□□□□□ -0.92
TCF4-229ENST00000565580 TRPC5Q9UL62 973 aaPredicted RBP9.32□□□□□ -0.92
TCF4-229ENST00000565580 MINK1Q8N4C8 1332 aaPredicted RBP9.31□□□□□ -0.92
TCF4-229ENST00000565580 PRR36Q9H6K5 1346 aa9.31□□□□□ -0.92
TCF4-229ENST00000565580 TNS3Q68CZ2 1445 aa9.31□□□□□ -0.92
TCF4-229ENST00000565580 PMFBP1Q8TBY8 1022 aa9.31□□□□□ -0.92
TCF4-229ENST00000565580 ANKARQ7Z5J8 1434 aa9.31□□□□□ -0.92
TCF4-229ENST00000565580 CABLES1Q8TDN4 633 aa9.3□□□□□ -0.92
TCF4-229ENST00000565580 ZSWIM6Q9HCJ5 1215 aa9.3□□□□□ -0.92
TCF4-229ENST00000565580 SBNO1A3KN83 1393 aa9.29□□□□□ -0.92
TCF4-229ENST00000565580 PSME1Q06323 249 aa9.29□□□□□ -0.92
TCF4-229ENST00000565580 STAC3Q96MF2 364 aa9.29□□□□□ -0.92
TCF4-229ENST00000565580 KRTAP3-3Q9BYR6 98 aa9.29□□□□□ -0.92
TCF4-229ENST00000565580 KRTAP3-2Q9BYR7 98 aa9.29□□□□□ -0.92
TCF4-229ENST00000565580 SLIT2O94813 1529 aa9.29□□□□□ -0.92
TCF4-229ENST00000565580 TULP4Q9NRJ4 1543 aa9.29□□□□□ -0.92
TCF4-229ENST00000565580 ERBB3P21860 1342 aa9.29□□□□□ -0.92
TCF4-229ENST00000565580 ARHGEF28Q8N1W1 1705 aaKnown RBP9.28□□□□□ -0.92
TCF4-229ENST00000565580 WASLO00401 505 aaPredicted RBP9.28□□□□□ -0.92
TCF4-229ENST00000565580 LMOD2Q6P5Q4 547 aa9.28□□□□□ -0.92
TCF4-229ENST00000565580 GJD4Q96KN9 370 aaPredicted RBP9.28□□□□□ -0.92
TCF4-229ENST00000565580 ABCA3Q99758 1704 aa9.28□□□□□ -0.92
TCF4-229ENST00000565580 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.28□□□□□ -0.92
TCF4-229ENST00000565580 TRPM3Q9HCF6 1732 aaPredicted RBP9.28□□□□□ -0.92
TCF4-229ENST00000565580 POTEB3A0JP26 581 aa9.27□□□□□ -0.93
TCF4-229ENST00000565580 POTEBQ6S5H4 581 aa9.27□□□□□ -0.93
TCF4-229ENST00000565580 UNC5CLQ8IV45 518 aa9.27□□□□□ -0.93
TCF4-229ENST00000565580 MICALL2Q8IY33 904 aa9.27□□□□□ -0.93
TCF4-229ENST00000565580 GLI3P10071 1580 aa9.27□□□□□ -0.93
TCF4-229ENST00000565580 RALGAPBQ86X10 1494 aa9.27□□□□□ -0.93
TCF4-229ENST00000565580 ARHGEF10O15013 1369 aa9.26□□□□□ -0.93
TCF4-229ENST00000565580 EIF3AQ14152 1382 aaKnown RBP9.26□□□□□ -0.93
TCF4-229ENST00000565580 ATAD2Q6PL18 1390 aa9.26□□□□□ -0.93
TCF4-229ENST00000565580 EP400Q96L91 3159 aa9.26□□□□□ -0.93
TCF4-229ENST00000565580 HAP1P54257 671 aaPredicted RBP9.26□□□□□ -0.93
TCF4-229ENST00000565580 NBPF1Q3BBV0 1214 aa9.26□□□□□ -0.93
TCF4-229ENST00000565580 ATP7BP35670 1465 aa9.26□□□□□ -0.93
TCF4-229ENST00000565580 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.25□□□□□ -0.93
TCF4-229ENST00000565580 FAM83GA6ND36 823 aa9.25□□□□□ -0.93
TCF4-229ENST00000565580 ZFP91Q96JP5 570 aaPredicted RBP9.25□□□□□ -0.93
TCF4-229ENST00000565580 PLCH1Q4KWH8 1693 aa9.25□□□□□ -0.93
TCF4-229ENST00000565580 ALS2Q96Q42 1657 aa9.25□□□□□ -0.93
TCF4-229ENST00000565580 GPRASP1Q5JY77 1395 aa9.24□□□□□ -0.93
TCF4-229ENST00000565580 NGDNQ8NEJ9 315 aaKnown RBP9.24□□□□□ -0.93
TCF4-229ENST00000565580 NUDT16Q96DE0 195 aaKnown RBP9.24□□□□□ -0.93
TCF4-229ENST00000565580 CDK19Q9BWU1 502 aa9.24□□□□□ -0.93
TCF4-229ENST00000565580 RTN4Q9NQC3 1192 aaKnown RBP9.24□□□□□ -0.93
TCF4-229ENST00000565580 KIAA1210Q9ULL0 1709 aa9.24□□□□□ -0.93
TCF4-229ENST00000565580 VPS72Q15906 364 aa9.23□□□□□ -0.93
TCF4-229ENST00000565580 NWD2Q9ULI1 1742 aa9.22□□□□□ -0.93
TCF4-229ENST00000565580 NLRP6P59044 892 aa9.22□□□□□ -0.93
TCF4-229ENST00000565580 L3MBTL2Q969R5 705 aa9.22□□□□□ -0.93
TCF4-229ENST00000565580 RNF25Q96BH1 459 aaPredicted RBP9.22□□□□□ -0.93
TCF4-229ENST00000565580 SIN3AQ96ST3 1273 aa9.22□□□□□ -0.93
TCF4-229ENST00000565580 TOPAZ1Q8N9V7 1692 aa9.22□□□□□ -0.93
TCF4-229ENST00000565580 ITSN1Q15811 1721 aa9.22□□□□□ -0.93
TCF4-229ENST00000565580 CRYBG1Q9Y4K1 1723 aa9.22□□□□□ -0.93
TCF4-229ENST00000565580 SEPT12Q8IYM1 358 aa9.21□□□□□ -0.94
TCF4-229ENST00000565580 BTG4Q9NY30 223 aa9.21□□□□□ -0.94
TCF4-229ENST00000565580 CCDC9Q9Y3X0 531 aaKnown RBP9.21□□□□□ -0.94
TCF4-229ENST00000565580 NRAPQ86VF7 1730 aa9.21□□□□□ -0.94
TCF4-229ENST00000565580 BRWD3Q6RI45 1802 aa9.21□□□□□ -0.94
TCF4-229ENST00000565580 ONECUT3O60422 494 aaPredicted RBP9.2□□□□□ -0.94
TCF4-229ENST00000565580 ACEP12821 1306 aa9.2□□□□□ -0.94
TCF4-229ENST00000565580 CENPJQ9HC77 1338 aaPredicted RBP9.2□□□□□ -0.94
TCF4-229ENST00000565580 POLR3AO14802 1390 aaPredicted RBP9.2□□□□□ -0.94
TCF4-229ENST00000565580 COL14A1Q05707 1796 aaKnown RBP9.19□□□□□ -0.94
TCF4-229ENST00000565580 PLEKHG3A1L390 1219 aa9.19□□□□□ -0.94
TCF4-229ENST00000565580 NBPF8Q3BBV2 869 aa9.19□□□□□ -0.94
TCF4-229ENST00000565580 NUTM2GQ5VZR2 741 aa9.19□□□□□ -0.94
TCF4-229ENST00000565580 MS4A4AQ96JQ5 239 aa9.19□□□□□ -0.94
TCF4-229ENST00000565580 NEUROD1Q13562 356 aa9.18□□□□□ -0.94
TCF4-229ENST00000565580 CHRNA2Q15822 529 aa9.18□□□□□ -0.94
TCF4-229ENST00000565580 FAM98CQ17RN3 349 aaKnown RBP9.18□□□□□ -0.94
TCF4-229ENST00000565580 VARS2Q5ST30 1063 aaKnown RBP9.18□□□□□ -0.94
TCF4-229ENST00000565580 TMEM92Q6UXU6 159 aa9.18□□□□□ -0.94
TCF4-229ENST00000565580 KIAA0232Q92628 1395 aa9.18□□□□□ -0.94
TCF4-229ENST00000565580 PRDM11Q9NQV5 511 aa9.18□□□□□ -0.94
TCF4-229ENST00000565580 PHRF1Q9P1Y6 1649 aaKnown RBP9.18□□□□□ -0.94
TCF4-229ENST00000565580 SRCAPQ6ZRS2 3230 aa9.18□□□□□ -0.94
TCF4-229ENST00000565580 QRICH2Q9H0J4 1663 aa9.17□□□□□ -0.94
TCF4-229ENST00000565580 BLMP54132 1417 aaPredicted RBP9.17□□□□□ -0.94
TCF4-229ENST00000565580 PPIP5K1Q6PFW1 1433 aa9.17□□□□□ -0.94
TCF4-229ENST00000565580 SPATA31A5Q5VU36 1347 aa9.17□□□□□ -0.94
TCF4-229ENST00000565580 SPATA31A7Q8IWB4 1347 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms