RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 ME1P48163 572 aa5.97□□□□□ -1.45
SMG1-211ENST00000565324 SPA17Q15506 151 aa5.97□□□□□ -1.45
SMG1-211ENST00000565324 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMG1-211ENST00000565324 LNPKQ9C0E8 428 aa5.97□□□□□ -1.45
SMG1-211ENST00000565324 DIAPH1O60610 1272 aaKnown RBP5.97□□□□□ -1.45
SMG1-211ENST00000565324 SFPQP23246 707 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMG1-211ENST00000565324 BBXQ8WY36 941 aaPredicted RBP5.97□□□□□ -1.45
SMG1-211ENST00000565324 FGFR1OPO95684 399 aaKnown RBP5.97□□□□□ -1.45
SMG1-211ENST00000565324 SREK1Q8WXA9 508 aaKnown RBP5.97□□□□□ -1.45
SMG1-211ENST00000565324 SETSIPP0DME0 302 aa5.97□□□□□ -1.45
SMG1-211ENST00000565324 ANAPC15P60006 121 aa5.97□□□□□ -1.45
SMG1-211ENST00000565324 BMS1Q14692 1282 aaKnown RBP5.97□□□□□ -1.45
SMG1-211ENST00000565324 PTPN14Q15678 1187 aa5.97□□□□□ -1.45
SMG1-211ENST00000565324 DAAM2Q86T65 1068 aa5.97□□□□□ -1.45
SMG1-211ENST00000565324 GCC1Q96CN9 775 aa5.97□□□□□ -1.45
SMG1-211ENST00000565324 NUP62CLQ9H1M0 184 aa5.97□□□□□ -1.45
SMG1-211ENST00000565324 K7ELQ4 463 aaPredicted RBP5.97□□□□□ -1.45
SMG1-211ENST00000565324 UBTFL1P0CB47 393 aaPredicted RBP5.97□□□□□ -1.45
SMG1-211ENST00000565324 IFFO1Q0D2I5 559 aa5.97□□□□□ -1.45
SMG1-211ENST00000565324 MAP3K11Q16584 847 aa5.97□□□□□ -1.45
SMG1-211ENST00000565324 NAA15Q9BXJ9 866 aaKnown RBP5.97□□□□□ -1.45
SMG1-211ENST00000565324 FAM193AP78312 1265 aa5.96□□□□□ -1.45
SMG1-211ENST00000565324 TMEM132AQ24JP5 1023 aa5.96□□□□□ -1.45
SMG1-211ENST00000565324 BRPF3Q9ULD4 1205 aa5.96□□□□□ -1.45
SMG1-211ENST00000565324 NOL7Q9UMY1 257 aaKnown RBP5.96□□□□□ -1.45
SMG1-211ENST00000565324 SSR1P43307 286 aaKnown RBP5.96□□□□□ -1.45
SMG1-211ENST00000565324 UPF3BQ9BZI7 483 aaKnown RBP5.96□□□□□ -1.45
SMG1-211ENST00000565324 NEBLO76041 1014 aa5.96□□□□□ -1.45
SMG1-211ENST00000565324 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.96□□□□□ -1.451e-6■■■□□ 14.7
SMG1-211ENST00000565324 CCDC57Q2TAC2 916 aa5.96□□□□□ -1.46
SMG1-211ENST00000565324 WDR66Q8TBY9 1149 aa5.96□□□□□ -1.46
SMG1-211ENST00000565324 BCL2L13Q9BXK5 485 aa5.96□□□□□ -1.46
SMG1-211ENST00000565324 SRCIN1Q9C0H9 1055 aa5.96□□□□□ -1.46
SMG1-211ENST00000565324 BMP2KQ9NSY1 1161 aaPredicted RBP5.96□□□□□ -1.46
SMG1-211ENST00000565324 CCDC9Q9Y3X0 531 aaKnown RBP5.96□□□□□ -1.46
SMG1-211ENST00000565324 FYB1O15117 783 aa5.96□□□□□ -1.46
SMG1-211ENST00000565324 KRT32Q14532 448 aa5.96□□□□□ -1.46
SMG1-211ENST00000565324 WASF1Q92558 559 aa5.96□□□□□ -1.46
SMG1-211ENST00000565324 GSDMDP57764 484 aa5.96□□□□□ -1.46
SMG1-211ENST00000565324 GPATCH11Q8N954 259 aa5.96□□□□□ -1.46
SMG1-211ENST00000565324 SMARCC1Q92922 1105 aaPredicted RBP5.96□□□□□ -1.46
SMG1-211ENST00000565324 GRIPAP1Q4V328 841 aa5.96□□□□□ -1.46
SMG1-211ENST00000565324 PANK3Q9H999 370 aa5.96□□□□□ -1.46
SMG1-211ENST00000565324 CEP131Q9UPN4 1083 aa5.96□□□□□ -1.46
SMG1-211ENST00000565324 PLEKHH2Q8IVE3 1493 aa5.96□□□□□ -1.46
SMG1-211ENST00000565324 RRP7AQ9Y3A4 280 aaKnown RBP5.96□□□□□ -1.46
SMG1-211ENST00000565324 CCDC27Q2M243 656 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 FAM177A1Q8N128 213 aaPredicted RBP5.95□□□□□ -1.46
SMG1-211ENST00000565324 EHBP1Q8NDI1 1231 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 HSPA4P34932 840 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 DDX46Q7L014 1031 aaKnown RBP5.95□□□□□ -1.46
SMG1-211ENST00000565324 HOOK3Q86VS8 718 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 ANO10Q9NW15 660 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 APAF1O14727 1248 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 FIBPO43427 364 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 IKQ13123 557 aaPredicted RBP5.95□□□□□ -1.46
SMG1-211ENST00000565324 PRIMPOLQ96LW4 560 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 NACAP1Q9BZK3 213 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 PPP6R1Q9UPN7 881 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 MNAT1P51948 309 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 ANKS4BQ8N8V4 417 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 NSRP1Q9H0G5 558 aaKnown RBP5.95□□□□□ -1.46
SMG1-211ENST00000565324 STMN4Q9H169 189 aaPredicted RBP5.95□□□□□ -1.46
SMG1-211ENST00000565324 GTF2A1P52655 376 aaPredicted RBP5.95□□□□□ -1.46
SMG1-211ENST00000565324 WASHC4Q2M389 1173 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 ZSCAN31Q96LW9 406 aaPredicted RBP5.95□□□□□ -1.46
SMG1-211ENST00000565324 FOSBP53539 338 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 FSD1Q9BTV5 496 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 VGFO15240 615 aaPredicted RBP5.95□□□□□ -1.46
SMG1-211ENST00000565324 SPATA32Q96LK8 384 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 PAXBP1Q9Y5B6 917 aa5.95□□□□□ -1.46
SMG1-211ENST00000565324 PDE3AQ14432 1141 aa5.94□□□□□ -1.46
SMG1-211ENST00000565324 RIPK4P57078 832 aa5.94□□□□□ -1.46
SMG1-211ENST00000565324 RNF187Q5TA31 235 aaPredicted RBP5.94□□□□□ -1.46
SMG1-211ENST00000565324 TANGO6Q9C0B7 1094 aa5.94□□□□□ -1.46
SMG1-211ENST00000565324 CPSF2Q9P2I0 782 aaKnown RBP5.94□□□□□ -1.46
SMG1-211ENST00000565324 POLA1P09884 1462 aaPredicted RBP5.94□□□□□ -1.46
SMG1-211ENST00000565324 AEBP2Q6ZN18 517 aaPredicted RBP5.94□□□□□ -1.46
SMG1-211ENST00000565324 BCCIPQ9P287 314 aaKnown RBP eCLIP5.94□□□□□ -1.46
SMG1-211ENST00000565324 USO1O60763 962 aaKnown RBP5.94□□□□□ -1.46
SMG1-211ENST00000565324 PAFAH1B1P43034 410 aa5.94□□□□□ -1.46
SMG1-211ENST00000565324 EIF5P55010 431 aaKnown RBP5.94□□□□□ -1.46
SMG1-211ENST00000565324 SPECC1Q5M775 1068 aa5.94□□□□□ -1.46
SMG1-211ENST00000565324 IPO4Q8TEX9 1081 aaKnown RBP5.94□□□□□ -1.46
SMG1-211ENST00000565324 HMGB1P09429 215 aaKnown RBP5.94□□□□□ -1.46
SMG1-211ENST00000565324 CCDC30Q5VVM6 783 aa5.94□□□□□ -1.46
SMG1-211ENST00000565324 LARP1BQ659C4 914 aaKnown RBP5.94□□□□□ -1.46
SMG1-211ENST00000565324 BCL11BQ9C0K0 894 aaPredicted RBP5.94□□□□□ -1.46
SMG1-211ENST00000565324 KIF20AO95235 890 aa5.94□□□□□ -1.46
SMG1-211ENST00000565324 SMG6Q86US8 1419 aaKnown RBP5.94□□□□□ -1.46
SMG1-211ENST00000565324 NEUROD6Q96NK8 337 aa5.94□□□□□ -1.46
SMG1-211ENST00000565324 ALS2CR12Q96Q35 445 aa5.94□□□□□ -1.46
SMG1-211ENST00000565324 FERMT1Q9BQL6 677 aa5.94□□□□□ -1.46
SMG1-211ENST00000565324 UBE2Q2Q8WVN8 375 aa5.94□□□□□ -1.46
SMG1-211ENST00000565324 CCDC97Q96F63 343 aaPredicted RBP5.94□□□□□ -1.46
SMG1-211ENST00000565324 KIF3CO14782 793 aa5.94□□□□□ -1.46
SMG1-211ENST00000565324 CCDC183Q5T5S1 534 aa5.94□□□□□ -1.46
SMG1-211ENST00000565324 FKBP15Q5T1M5 1219 aa5.93□□□□□ -1.46
SMG1-211ENST00000565324 GGT6Q6P531 493 aa5.93□□□□□ -1.46
SMG1-211ENST00000565324 GNL3LQ9NVN8 582 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 756.1 ms