RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 NNTQ13423 1086 aa8.8□□□□□ -1
PALB2-203ENST00000565038 Q6ZNB5 142 aa8.8□□□□□ -1
PALB2-203ENST00000565038 A6NJR5 290 aa8.79□□□□□ -1
PALB2-203ENST00000565038 EIF4G2P78344 907 aaKnown RBP eCLIP8.79□□□□□ -1
PALB2-203ENST00000565038 NR5A1Q13285 461 aa8.79□□□□□ -1
PALB2-203ENST00000565038 FNBP4Q8N3X1 1017 aaPredicted RBP8.79□□□□□ -1
PALB2-203ENST00000565038 CDV3Q9UKY7 258 aaKnown RBP8.79□□□□□ -1
PALB2-203ENST00000565038 GIGYF1O75420 1035 aaPredicted RBP8.78□□□□□ -1
PALB2-203ENST00000565038 NBPF20Q3BBV1 942 aa8.78□□□□□ -1
PALB2-203ENST00000565038 INTS6LQ5JSJ4 861 aaKnown RBP8.77□□□□□ -1.01
PALB2-203ENST00000565038 C14orf37Q86TY3 774 aa8.77□□□□□ -1.01
PALB2-203ENST00000565038 MYT1Q01538 1121 aa8.76□□□□□ -1.01
PALB2-203ENST00000565038 SEMA3FQ13275 785 aa8.76□□□□□ -1.01
PALB2-203ENST00000565038 ZMYND15Q9H091 742 aa8.76□□□□□ -1.01
PALB2-203ENST00000565038 AVPP01185 164 aa8.75□□□□□ -1.01
PALB2-203ENST00000565038 WDR4P57081 412 aaKnown RBP8.75□□□□□ -1.01
PALB2-203ENST00000565038 MCCD1P59942 119 aaPredicted RBP8.75□□□□□ -1.01
PALB2-203ENST00000565038 CCDC116Q8IYX3 515 aa8.75□□□□□ -1.01
PALB2-203ENST00000565038 CEP126Q9P2H0 1117 aa8.75□□□□□ -1.01
PALB2-203ENST00000565038 ESPNB1AK53 854 aa8.74□□□□□ -1.01
PALB2-203ENST00000565038 LCE2BO14633 110 aa8.74□□□□□ -1.01
PALB2-203ENST00000565038 ST8SIA5O15466 376 aa8.74□□□□□ -1.01
PALB2-203ENST00000565038 PPP1R26Q5T8A7 1209 aaPredicted RBP8.74□□□□□ -1.01
PALB2-203ENST00000565038 ERVH48-1M5A8F1 160 aa8.73□□□□□ -1.01
PALB2-203ENST00000565038 TRAK2O60296 914 aa8.73□□□□□ -1.01
PALB2-203ENST00000565038 ZIC2O95409 532 aaPredicted RBP8.73□□□□□ -1.01
PALB2-203ENST00000565038 HDGFL1Q5TGJ6 251 aa8.73□□□□□ -1.01
PALB2-203ENST00000565038 ADAMTS19Q8TE59 1207 aa8.73□□□□□ -1.01
PALB2-203ENST00000565038 ZNF592Q92610 1267 aa8.73□□□□□ -1.01
PALB2-203ENST00000565038 ITPKCQ96DU7 683 aa8.73□□□□□ -1.01
PALB2-203ENST00000565038 KLF16Q9BXK1 252 aaPredicted RBP8.73□□□□□ -1.01
PALB2-203ENST00000565038 ALG2Q9H553 416 aa8.73□□□□□ -1.01
PALB2-203ENST00000565038 ZFAND3Q9H8U3 227 aa8.73□□□□□ -1.01
PALB2-203ENST00000565038 TMPRSS4Q9NRS4 437 aa8.73□□□□□ -1.01
PALB2-203ENST00000565038 AXIN1O15169 862 aa8.72□□□□□ -1.01
PALB2-203ENST00000565038 CAPN5O15484 640 aaPredicted RBP8.72□□□□□ -1.01
PALB2-203ENST00000565038 TIMP2P16035 220 aa8.72□□□□□ -1.01
PALB2-203ENST00000565038 SOX11P35716 441 aa8.72□□□□□ -1.01
PALB2-203ENST00000565038 TRAF7Q6Q0C0 670 aa8.72□□□□□ -1.01
PALB2-203ENST00000565038 ZNF777Q9ULD5 760 aaPredicted RBP8.72□□□□□ -1.01
PALB2-203ENST00000565038 DHX9Q08211 1270 aaKnown RBP8.71□□□□□ -1.02
PALB2-203ENST00000565038 AAASQ9NRG9 546 aa8.71□□□□□ -1.02
PALB2-203ENST00000565038 EMILIN1Q9Y6C2 1016 aa8.71□□□□□ -1.02
PALB2-203ENST00000565038 CTC1Q2NKJ3 1217 aa8.7□□□□□ -1.02
PALB2-203ENST00000565038 TSGA10IPQ3SY00 556 aa8.7□□□□□ -1.02
PALB2-203ENST00000565038 SLFNL1Q499Z3 407 aa8.7□□□□□ -1.02
PALB2-203ENST00000565038 RNF20Q5VTR2 975 aa8.7□□□□□ -1.02
PALB2-203ENST00000565038 SEPT12Q8IYM1 358 aa8.7□□□□□ -1.02
PALB2-203ENST00000565038 GLMNQ92990 594 aa8.7□□□□□ -1.02
PALB2-203ENST00000565038 DACH1Q9UI36 760 aa8.7□□□□□ -1.02
PALB2-203ENST00000565038 PIK3CDO00329 1044 aa8.69□□□□□ -1.02
PALB2-203ENST00000565038 SMCPP49901 116 aaPredicted RBP8.69□□□□□ -1.02
PALB2-203ENST00000565038 RNF135Q8IUD6 432 aa8.69□□□□□ -1.02
PALB2-203ENST00000565038 PHTF2Q8N3S3 785 aa8.69□□□□□ -1.02
PALB2-203ENST00000565038 ZNF784Q8NCA9 323 aaPredicted RBP8.69□□□□□ -1.02
PALB2-203ENST00000565038 CCDC85AQ96PX6 553 aaPredicted RBP8.69□□□□□ -1.02
PALB2-203ENST00000565038 PGPEP1Q9NXJ5 209 aa8.69□□□□□ -1.02
PALB2-203ENST00000565038 PCDHB11Q9Y5F2 797 aa8.69□□□□□ -1.02
PALB2-203ENST00000565038 CBLBQ13191 982 aa8.68□□□□□ -1.02
PALB2-203ENST00000565038 CRIPAKQ8N1N5 446 aa8.68□□□□□ -1.02
PALB2-203ENST00000565038 CYLDQ9NQC7 956 aa8.68□□□□□ -1.02
PALB2-203ENST00000565038 BMP1P13497 986 aa8.67□□□□□ -1.02
PALB2-203ENST00000565038 CALR3Q96L12 384 aaKnown RBP8.67□□□□□ -1.02
PALB2-203ENST00000565038 CDCA7Q9BWT1 371 aaPredicted RBP8.67□□□□□ -1.02
PALB2-203ENST00000565038 LILRA1O75019 489 aa8.66□□□□□ -1.02
PALB2-203ENST00000565038 TIMELESSQ9UNS1 1208 aa8.66□□□□□ -1.02
PALB2-203ENST00000565038 ADD1P35611 737 aaKnown RBP8.65□□□□□ -1.02
PALB2-203ENST00000565038 SCTRP47872 440 aa8.65□□□□□ -1.02
PALB2-203ENST00000565038 DOLKQ9UPQ8 538 aa8.65□□□□□ -1.02
PALB2-203ENST00000565038 ARID3CA6NKF2 412 aa8.64□□□□□ -1.03
PALB2-203ENST00000565038 SKIP12755 728 aa8.64□□□□□ -1.03
PALB2-203ENST00000565038 TRIM46Q7Z4K8 759 aa8.64□□□□□ -1.03
PALB2-203ENST00000565038 CCDC125Q86Z20 511 aa8.64□□□□□ -1.03
PALB2-203ENST00000565038 PLPP7Q8NBV4 271 aa8.64□□□□□ -1.03
PALB2-203ENST00000565038 AGBL1Q96MI9 1066 aa8.64□□□□□ -1.03
PALB2-203ENST00000565038 UCN2Q96RP3 112 aa8.64□□□□□ -1.03
PALB2-203ENST00000565038 ATP13A2Q9NQ11 1180 aa8.64□□□□□ -1.03
PALB2-203ENST00000565038 OXLD1Q5BKU9 147 aa8.63□□□□□ -1.03
PALB2-203ENST00000565038 TBC1D9Q6ZT07 1266 aa8.63□□□□□ -1.03
PALB2-203ENST00000565038 MEIOBQ8N635 442 aa8.63□□□□□ -1.03
PALB2-203ENST00000565038 ERVK-9P63128 1117 aa8.62□□□□□ -1.03
PALB2-203ENST00000565038 C6orf118Q5T5N4 469 aa8.62□□□□□ -1.03
PALB2-203ENST00000565038 CC2D2BQ6DHV5 1058 aa8.62□□□□□ -1.03
PALB2-203ENST00000565038 Q6ZVU0 165 aa8.62□□□□□ -1.03
PALB2-203ENST00000565038 CHIC2Q9UKJ5 165 aa8.62□□□□□ -1.03
PALB2-203ENST00000565038 RELBQ01201 579 aa8.61□□□□□ -1.03
PALB2-203ENST00000565038 MRPL14Q6P1L8 145 aaKnown RBP8.61□□□□□ -1.03
PALB2-203ENST00000565038 DEPDC4Q8N2C3 294 aa8.61□□□□□ -1.03
PALB2-203ENST00000565038 PURBQ96QR8 312 aaKnown RBP8.61□□□□□ -1.03
PALB2-203ENST00000565038 ESF1Q9H501 851 aaKnown RBP8.61□□□□□ -1.03
PALB2-203ENST00000565038 POTECB2RU33 542 aa8.6□□□□□ -1.03
PALB2-203ENST00000565038 MAP7D1Q3KQU3 841 aa8.6□□□□□ -1.03
PALB2-203ENST00000565038 ZNF395Q9H8N7 513 aaPredicted RBP8.6□□□□□ -1.03
PALB2-203ENST00000565038 GMPR2Q9P2T1 348 aaKnown RBP8.6□□□□□ -1.03
PALB2-203ENST00000565038 TFIP11Q9UBB9 837 aaKnown RBP8.6□□□□□ -1.03
PALB2-203ENST00000565038 UPP2O95045 317 aa8.59□□□□□ -1.03
PALB2-203ENST00000565038 MYCP01106 439 aaPredicted RBP8.59□□□□□ -1.03
PALB2-203ENST00000565038 ADH1AP07327 375 aa8.59□□□□□ -1.03
PALB2-203ENST00000565038 BMP2P12643 396 aa8.59□□□□□ -1.03
PALB2-203ENST00000565038 ERICH6Q7L0X2 663 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms