RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ORAI2Q96SN7 254 aa4.25□□□□□ -1.73
CHD9-213ENST00000564845 PPP4R2Q9NY27 417 aa4.25□□□□□ -1.73
CHD9-213ENST00000564845 NCLP19338 710 aaKnown RBP4.25□□□□□ -1.73
CHD9-213ENST00000564845 CHRNA2Q15822 529 aa4.25□□□□□ -1.73
CHD9-213ENST00000564845 ITPRIPQ8IWB1 547 aa4.25□□□□□ -1.73
CHD9-213ENST00000564845 KDM5AP29375 1690 aaKnown RBP4.25□□□□□ -1.73
CHD9-213ENST00000564845 CAMSAP1Q5T5Y3 1602 aa4.25□□□□□ -1.73
CHD9-213ENST00000564845 PPFIA3O75145 1194 aa4.25□□□□□ -1.73
CHD9-213ENST00000564845 GZF1Q9H116 711 aaPredicted RBP4.25□□□□□ -1.73
CHD9-213ENST00000564845 TECPR2O15040 1411 aa4.25□□□□□ -1.73
CHD9-213ENST00000564845 KCNQ4P56696 695 aa4.25□□□□□ -1.73
CHD9-213ENST00000564845 A0A1W2PP64 1363 aa4.25□□□□□ -1.73
CHD9-213ENST00000564845 EIF2S2P20042 333 aaKnown RBP4.24□□□□□ -1.73
CHD9-213ENST00000564845 FAM182BQ5T319 152 aa4.24□□□□□ -1.73
CHD9-213ENST00000564845 ESCO1Q5FWF5 840 aa4.24□□□□□ -1.73
CHD9-213ENST00000564845 GOLGA2Q08379 1002 aa4.24□□□□□ -1.73
CHD9-213ENST00000564845 DDX54Q8TDD1 881 aaKnown RBP4.24□□□□□ -1.73
CHD9-213ENST00000564845 SETD1BQ9UPS6 1966 aaKnown RBP4.24□□□□□ -1.73
CHD9-213ENST00000564845 CDC42BPGQ6DT37 1551 aa4.24□□□□□ -1.73
CHD9-213ENST00000564845 SMARCA5O60264 1052 aaPredicted RBP4.24□□□□□ -1.73
CHD9-213ENST00000564845 RIMBP3CA6NJZ7 1639 aa4.24□□□□□ -1.73
CHD9-213ENST00000564845 RIMBP3BA6NNM3 1639 aa4.24□□□□□ -1.73
CHD9-213ENST00000564845 RIMBP3Q9UFD9 1639 aa4.24□□□□□ -1.73
CHD9-213ENST00000564845 NAP1L2Q9ULW6 460 aaPredicted RBP4.24□□□□□ -1.73
CHD9-213ENST00000564845 CLTCQ00610 1675 aaKnown RBP4.24□□□□□ -1.73
CHD9-213ENST00000564845 KIF3AQ9Y496 699 aa4.24□□□□□ -1.73
CHD9-213ENST00000564845 MARF1Q9Y4F3 1742 aaKnown RBP4.24□□□□□ -1.73
CHD9-213ENST00000564845 PCDHB15Q9Y5E8 787 aa4.24□□□□□ -1.73
CHD9-213ENST00000564845 NEO1Q92859 1461 aa4.24□□□□□ -1.73
CHD9-213ENST00000564845 GOLGA6L22H0YM25 854 aa4.24□□□□□ -1.73
CHD9-213ENST00000564845 NGDNQ8NEJ9 315 aaKnown RBP4.24□□□□□ -1.73
CHD9-213ENST00000564845 SMC4Q9NTJ3 1288 aa4.24□□□□□ -1.73
CHD9-213ENST00000564845 SULT6B1Q6IMI4 303 aa4.23□□□□□ -1.73
CHD9-213ENST00000564845 NOB1Q9ULX3 412 aaKnown RBP4.23□□□□□ -1.73
CHD9-213ENST00000564845 ANP32AP39687 249 aaKnown RBP4.23□□□□□ -1.73
CHD9-213ENST00000564845 KDM2BQ8NHM5 1336 aa4.23□□□□□ -1.73
CHD9-213ENST00000564845 SCAF11Q99590 1463 aaKnown RBP4.23□□□□□ -1.73
CHD9-213ENST00000564845 MYO5BQ9ULV0 1848 aa4.23□□□□□ -1.73
CHD9-213ENST00000564845 RBAK-RBAKDNI3L0D1 243 aa4.23□□□□□ -1.73
CHD9-213ENST00000564845 KCNQ3O43525 872 aa4.23□□□□□ -1.73
CHD9-213ENST00000564845 KCNA6P17658 529 aa4.23□□□□□ -1.73
CHD9-213ENST00000564845 NUDT16Q96DE0 195 aaKnown RBP4.23□□□□□ -1.73
CHD9-213ENST00000564845 LNPKQ9C0E8 428 aa4.23□□□□□ -1.73
CHD9-213ENST00000564845 WWC3Q9ULE0 1092 aa4.23□□□□□ -1.73
CHD9-213ENST00000564845 PDE4AP27815 886 aa4.22□□□□□ -1.73
CHD9-213ENST00000564845 AMOTL2Q9Y2J4 779 aa4.22□□□□□ -1.73
CHD9-213ENST00000564845 PRR36Q9H6K5 1346 aa4.22□□□□□ -1.73
CHD9-213ENST00000564845 C8orf58Q8NAV2 365 aa4.22□□□□□ -1.73
CHD9-213ENST00000564845 CCDC85AQ96PX6 553 aaPredicted RBP4.22□□□□□ -1.73
CHD9-213ENST00000564845 NDUFB9Q9Y6M9 179 aa4.22□□□□□ -1.73
CHD9-213ENST00000564845 MFAP1P55081 439 aaKnown RBP4.22□□□□□ -1.73
CHD9-213ENST00000564845 LRRFIP1Q32MZ4 808 aaKnown RBP4.22□□□□□ -1.73
CHD9-213ENST00000564845 HTTP42858 3142 aa4.22□□□□□ -1.73
CHD9-213ENST00000564845 NRKQ7Z2Y5 1582 aa4.22□□□□□ -1.73
CHD9-213ENST00000564845 ACEP12821 1306 aa4.22□□□□□ -1.73
CHD9-213ENST00000564845 KDM4AO75164 1064 aa4.22□□□□□ -1.73
CHD9-213ENST00000564845 CHGBP05060 677 aa4.22□□□□□ -1.73
CHD9-213ENST00000564845 AIMP1Q12904 312 aaKnown RBP4.22□□□□□ -1.73
CHD9-213ENST00000564845 C14orf93Q9H972 538 aaKnown RBP4.22□□□□□ -1.73
CHD9-213ENST00000564845 CPSF1Q10570 1443 aaKnown RBP4.22□□□□□ -1.73
CHD9-213ENST00000564845 OTUD7AQ8TE49 926 aaPredicted RBP4.22□□□□□ -1.73
CHD9-213ENST00000564845 POLKQ9UBT6 870 aa4.22□□□□□ -1.73
CHD9-213ENST00000564845 ADAMTS13Q76LX8 1427 aa4.21□□□□□ -1.73
CHD9-213ENST00000564845 BRD4O60885 1362 aaPredicted RBP4.21□□□□□ -1.73
CHD9-213ENST00000564845 HTATSF1O43719 755 aaKnown RBP4.21□□□□□ -1.73
CHD9-213ENST00000564845 RBM42Q9BTD8 480 aaKnown RBP4.21□□□□□ -1.73
CHD9-213ENST00000564845 CFAP53Q96M91 514 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 FAM177BA6PVY3 158 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 HSP90B1P14625 803 aaKnown RBP4.21□□□□□ -1.74
CHD9-213ENST00000564845 KIF13AQ9H1H9 1805 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 SLC39A6Q13433 755 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 G2E3Q7L622 706 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 RSPH6AQ9H0K4 717 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 ANKRD26Q9UPS8 1709 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 A2ML1A8K2U0 1454 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 MPRIPQ6WCQ1 1025 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 ABTB2Q8N961 1025 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 TRIM35Q9UPQ4 493 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 ZMYM3Q14202 1370 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 TMEM57Q8N5G2 664 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 PODXL2Q9NZ53 605 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 RIMS1Q86UR5 1692 aaKnown RBP4.21□□□□□ -1.74
CHD9-213ENST00000564845 NWD1Q149M9 1564 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 NLRP6P59044 892 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 FTSJ3Q8IY81 847 aaKnown RBP4.21□□□□□ -1.74
CHD9-213ENST00000564845 VGFO15240 615 aaPredicted RBP4.21□□□□□ -1.74
CHD9-213ENST00000564845 SLFN5Q08AF3 891 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 RALBP1Q15311 655 aa4.21□□□□□ -1.74
CHD9-213ENST00000564845 BCL11BQ9C0K0 894 aaPredicted RBP4.21□□□□□ -1.74
CHD9-213ENST00000564845 BECN1Q14457 450 aa4.2□□□□□ -1.74
CHD9-213ENST00000564845 SSH1Q8WYL5 1049 aa4.2□□□□□ -1.74
CHD9-213ENST00000564845 LGR6Q9HBX8 967 aa4.2□□□□□ -1.74
CHD9-213ENST00000564845 ROBO2Q9HCK4 1378 aa4.2□□□□□ -1.74
CHD9-213ENST00000564845 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.2□□□□□ -1.74
CHD9-213ENST00000564845 SPTBN5Q9NRC6 3674 aaKnown RBP4.2□□□□□ -1.74
CHD9-213ENST00000564845 MAPK8IP3Q9UPT6 1336 aa4.2□□□□□ -1.74
CHD9-213ENST00000564845 SLFNL1Q499Z3 407 aa4.2□□□□□ -1.74
CHD9-213ENST00000564845 HOXA7P31268 230 aaPredicted RBP4.2□□□□□ -1.74
CHD9-213ENST00000564845 PIP4K2BP78356 416 aa4.2□□□□□ -1.74
CHD9-213ENST00000564845 KLHDC4Q8TBB5 520 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms