RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 TRIM67Q6ZTA4 783 aa8.47□□□□□ -1.05
TUBGCP4-209ENST00000564511 CDC42BPBQ9Y5S2 1711 aa8.46□□□□□ -1.05
TUBGCP4-209ENST00000564511 TCOF1Q13428 1488 aaKnown RBP8.46□□□□□ -1.05
TUBGCP4-209ENST00000564511 ABCC1P33527 1531 aa8.46□□□□□ -1.05
TUBGCP4-209ENST00000564511 CD46P15529 392 aa8.46□□□□□ -1.06
TUBGCP4-209ENST00000564511 PLA2G2CQ5R387 149 aa8.46□□□□□ -1.06
TUBGCP4-209ENST00000564511 PTPRKQ15262 1439 aa8.46□□□□□ -1.06
TUBGCP4-209ENST00000564511 KIDINS220Q9ULH0 1771 aa8.45□□□□□ -1.06
TUBGCP4-209ENST00000564511 ZNF598Q86UK7 904 aaKnown RBP8.45□□□□□ -1.06
TUBGCP4-209ENST00000564511 FAM160A2Q8N612 972 aaPredicted RBP8.45□□□□□ -1.06
TUBGCP4-209ENST00000564511 CCDC102AQ96A19 550 aa8.45□□□□□ -1.06
TUBGCP4-209ENST00000564511 CEP170BQ9Y4F5 1589 aaPredicted RBP8.44□□□□□ -1.06
TUBGCP4-209ENST00000564511 MROH2AA6NES4 1674 aa8.44□□□□□ -1.06
TUBGCP4-209ENST00000564511 FMNL1O95466 1100 aaPredicted RBP8.44□□□□□ -1.06
TUBGCP4-209ENST00000564511 MDM2Q00987 491 aaPredicted RBP8.44□□□□□ -1.06
TUBGCP4-209ENST00000564511 BRICD5Q6PL45 260 aa8.44□□□□□ -1.06
TUBGCP4-209ENST00000564511 SAMD9LQ8IVG5 1584 aa8.44□□□□□ -1.06
TUBGCP4-209ENST00000564511 PREX2Q70Z35 1606 aa8.43□□□□□ -1.06
TUBGCP4-209ENST00000564511 MYO3AQ8NEV4 1616 aa8.43□□□□□ -1.06
TUBGCP4-209ENST00000564511 ITSN2Q9NZM3 1697 aa8.43□□□□□ -1.06
TUBGCP4-209ENST00000564511 SALL2Q9Y467 1007 aaPredicted RBP8.43□□□□□ -1.06
TUBGCP4-209ENST00000564511 CLTCQ00610 1675 aaKnown RBP8.43□□□□□ -1.06
TUBGCP4-209ENST00000564511 SUPT6HQ7KZ85 1726 aaKnown RBP8.43□□□□□ -1.06
TUBGCP4-209ENST00000564511 ANKLE2Q86XL3 938 aa8.42□□□□□ -1.06
TUBGCP4-209ENST00000564511 CFDP1Q9UEE9 299 aaPredicted RBP8.42□□□□□ -1.06
TUBGCP4-209ENST00000564511 A2MP01023 1474 aa8.42□□□□□ -1.06
TUBGCP4-209ENST00000564511 SHANK2Q9UPX8 1470 aa8.42□□□□□ -1.06
TUBGCP4-209ENST00000564511 ZNF142P52746 1687 aaPredicted RBP8.41□□□□□ -1.06
TUBGCP4-209ENST00000564511 CPS1P31327 1500 aa8.41□□□□□ -1.06
TUBGCP4-209ENST00000564511 A2ML1A8K2U0 1454 aa8.41□□□□□ -1.06
TUBGCP4-209ENST00000564511 GRIPAP1Q4V328 841 aa8.41□□□□□ -1.06
TUBGCP4-209ENST00000564511 ZNF697Q5TEC3 545 aa8.41□□□□□ -1.06
TUBGCP4-209ENST00000564511 FBXO31Q5XUX0 539 aaPredicted RBP8.41□□□□□ -1.06
TUBGCP4-209ENST00000564511 LMOD2Q6P5Q4 547 aa8.41□□□□□ -1.06
TUBGCP4-209ENST00000564511 RNF19BQ6ZMZ0 732 aa8.41□□□□□ -1.06
TUBGCP4-209ENST00000564511 ATP7AQ04656 1500 aa8.4□□□□□ -1.06
TUBGCP4-209ENST00000564511 SYCP2Q9BX26 1530 aa8.4□□□□□ -1.06
TUBGCP4-209ENST00000564511 GDF9O60383 454 aa8.4□□□□□ -1.06
TUBGCP4-209ENST00000564511 KDM4AO75164 1064 aa8.4□□□□□ -1.06
TUBGCP4-209ENST00000564511 THEMISQ8N1K5 641 aaPredicted RBP8.4□□□□□ -1.06
TUBGCP4-209ENST00000564511 LRRIQ1Q96JM4 1722 aa8.4□□□□□ -1.07
TUBGCP4-209ENST00000564511 DNMT1P26358 1616 aaKnown RBP8.4□□□□□ -1.07
TUBGCP4-209ENST00000564511 GPATCH8Q9UKJ3 1502 aaKnown RBP8.39□□□□□ -1.07
TUBGCP4-209ENST00000564511 CCDC18Q5T9S5 1454 aa8.39□□□□□ -1.07
TUBGCP4-209ENST00000564511 CASKIN1Q8WXD9 1431 aa8.39□□□□□ -1.07
TUBGCP4-209ENST00000564511 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.39□□□□□ -1.07
TUBGCP4-209ENST00000564511 PRR20EP86478 221 aa8.39□□□□□ -1.07
TUBGCP4-209ENST00000564511 PRR20CP86479 221 aa8.39□□□□□ -1.07
TUBGCP4-209ENST00000564511 PRR20DP86480 221 aa8.39□□□□□ -1.07
TUBGCP4-209ENST00000564511 PRR20BP86481 221 aa8.39□□□□□ -1.07
TUBGCP4-209ENST00000564511 PRR20AP86496 221 aa8.39□□□□□ -1.07
TUBGCP4-209ENST00000564511 PRDM9Q9NQV7 894 aa8.39□□□□□ -1.07
TUBGCP4-209ENST00000564511 FCF1Q9Y324 198 aaKnown RBP8.39□□□□□ -1.07
TUBGCP4-209ENST00000564511 KIAA1107Q9UPP5 1409 aa8.38□□□□□ -1.07
TUBGCP4-209ENST00000564511 TNRQ92752 1358 aa8.38□□□□□ -1.07
TUBGCP4-209ENST00000564511 CDC42BPAQ5VT25 1732 aa8.38□□□□□ -1.07
TUBGCP4-209ENST00000564511 GPCPD1Q9NPB8 672 aa8.38□□□□□ -1.07
TUBGCP4-209ENST00000564511 WASHC2CQ9Y4E1 1318 aa8.37□□□□□ -1.07
TUBGCP4-209ENST00000564511 PLXNC1O60486 1568 aa8.37□□□□□ -1.07
TUBGCP4-209ENST00000564511 KIF3BO15066 747 aa8.37□□□□□ -1.07
TUBGCP4-209ENST00000564511 CLCN1P35523 988 aa8.37□□□□□ -1.07
TUBGCP4-209ENST00000564511 MSS51Q4VC12 460 aa8.37□□□□□ -1.07
TUBGCP4-209ENST00000564511 HLA-CQ95604 372 aa8.37□□□□□ -1.07
TUBGCP4-209ENST00000564511 REPIN1Q9BWE0 567 aaKnown RBP8.37□□□□□ -1.07
TUBGCP4-209ENST00000564511 FAM217BQ9NTX9 383 aaPredicted RBP8.37□□□□□ -1.07
TUBGCP4-209ENST00000564511 RGS17Q9UGC6 210 aaPredicted RBP8.37□□□□□ -1.07
TUBGCP4-209ENST00000564511 PLEKHH2Q8IVE3 1493 aa8.37□□□□□ -1.07
TUBGCP4-209ENST00000564511 CCNB3Q8WWL7 1395 aa8.36□□□□□ -1.07
TUBGCP4-209ENST00000564511 NEURL4Q96JN8 1562 aa8.36□□□□□ -1.07
TUBGCP4-209ENST00000564511 ZNF644Q9H582 1327 aaPredicted RBP8.36□□□□□ -1.07
TUBGCP4-209ENST00000564511 TNFRSF10AO00220 468 aa8.36□□□□□ -1.07
TUBGCP4-209ENST00000564511 RPIAP49247 311 aa8.36□□□□□ -1.07
TUBGCP4-209ENST00000564511 BARGINQ6ZT62 677 aa8.36□□□□□ -1.07
TUBGCP4-209ENST00000564511 NPHP4O75161 1426 aaPredicted RBP8.36□□□□□ -1.07
TUBGCP4-209ENST00000564511 DHX29Q7Z478 1369 aaKnown RBP8.35□□□□□ -1.07
TUBGCP4-209ENST00000564511 INO80Q9ULG1 1556 aaPredicted RBP8.35□□□□□ -1.07
TUBGCP4-209ENST00000564511 ZMYND10O75800 440 aa8.35□□□□□ -1.07
TUBGCP4-209ENST00000564511 USP46P62068 366 aa8.35□□□□□ -1.07
TUBGCP4-209ENST00000564511 Q3C1V9 767 aa8.35□□□□□ -1.07
TUBGCP4-209ENST00000564511 KRI1Q8N9T8 703 aaKnown RBP8.35□□□□□ -1.07
TUBGCP4-209ENST00000564511 ZC3H15Q8WU90 426 aaKnown RBP8.35□□□□□ -1.07
TUBGCP4-209ENST00000564511 PKD2L1Q9P0L9 805 aa8.35□□□□□ -1.07
TUBGCP4-209ENST00000564511 SRCAPQ6ZRS2 3230 aa8.35□□□□□ -1.07
TUBGCP4-209ENST00000564511 MIA2Q96PC5 1412 aa8.35□□□□□ -1.07
TUBGCP4-209ENST00000564511 VWDEQ8N2E2 1590 aa8.35□□□□□ -1.07
TUBGCP4-209ENST00000564511 ALKQ9UM73 1620 aa8.34□□□□□ -1.07
TUBGCP4-209ENST00000564511 HOXA2O43364 376 aa8.34□□□□□ -1.07
TUBGCP4-209ENST00000564511 DGAT1O75907 488 aa8.34□□□□□ -1.07
TUBGCP4-209ENST00000564511 POLR1AO95602 1720 aaPredicted RBP8.34□□□□□ -1.07
TUBGCP4-209ENST00000564511 CD2BP2O95400 341 aaKnown RBP8.33□□□□□ -1.08
TUBGCP4-209ENST00000564511 MMP16P51512 607 aa8.33□□□□□ -1.08
TUBGCP4-209ENST00000564511 GUCA2AQ02747 115 aa8.33□□□□□ -1.08
TUBGCP4-209ENST00000564511 USB1Q9BQ65 265 aaKnown RBP8.33□□□□□ -1.08
TUBGCP4-209ENST00000564511 UGGT1Q9NYU2 1555 aa8.33□□□□□ -1.08
TUBGCP4-209ENST00000564511 LRRC7Q96NW7 1537 aa8.33□□□□□ -1.08
TUBGCP4-209ENST00000564511 FAM135AQ9P2D6 1515 aa8.33□□□□□ -1.08
TUBGCP4-209ENST00000564511 MTUS2Q5JR59 1369 aa8.33□□□□□ -1.08
TUBGCP4-209ENST00000564511 MED14O60244 1454 aa8.32□□□□□ -1.08
TUBGCP4-209ENST00000564511 PZPP20742 1482 aa8.32□□□□□ -1.08
TUBGCP4-209ENST00000564511 FYCO1Q9BQS8 1478 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms