RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 ERVK-7P63135 1459 aa15.04■□□□□ -0
SCAMP2-204ENST00000563829 CEP152O94986 1710 aa15.04■□□□□ -0
SCAMP2-204ENST00000563829 NOL8Q76FK4 1167 aaKnown RBP15.04■□□□□ -0
SCAMP2-204ENST00000563829 SYAP1Q96A49 352 aaPredicted RBP15.04■□□□□ -0
SCAMP2-204ENST00000563829 TAF3Q5VWG9 929 aa15.03■□□□□ -0
SCAMP2-204ENST00000563829 ZBTB7BO15156 539 aaPredicted RBP15.02■□□□□ -0
SCAMP2-204ENST00000563829 TMPOP42166 694 aaKnown RBP15.02■□□□□ -0
SCAMP2-204ENST00000563829 SIRT2Q8IXJ6 389 aa15.02■□□□□ -0
SCAMP2-204ENST00000563829 GADD45BO75293 160 aaPredicted RBP15.02□□□□□ -0.01
SCAMP2-204ENST00000563829 C16orf71Q8IYS4 520 aaPredicted RBP15.02□□□□□ -0.01
SCAMP2-204ENST00000563829 TRIM35Q9UPQ4 493 aa15.02□□□□□ -0.01
SCAMP2-204ENST00000563829 DIAPH3Q9NSV4 1193 aa15.01□□□□□ -0.01
SCAMP2-204ENST00000563829 NOS1P29475 1434 aa15.01□□□□□ -0.01
SCAMP2-204ENST00000563829 FBLN2P98095 1184 aa15.01□□□□□ -0.01
SCAMP2-204ENST00000563829 RSPH4AQ5TD94 716 aa15.01□□□□□ -0.01
SCAMP2-204ENST00000563829 ARHGEF5Q12774 1597 aa15.01□□□□□ -0.01
SCAMP2-204ENST00000563829 APBB1O00213 710 aa15.01□□□□□ -0.01
SCAMP2-204ENST00000563829 HCLS1P14317 486 aaPredicted RBP15.01□□□□□ -0.01
SCAMP2-204ENST00000563829 PLEKHM2Q8IWE5 1019 aa15.01□□□□□ -0.01
SCAMP2-204ENST00000563829 INTS3Q68E01 1043 aaKnown RBP15□□□□□ -0.01
SCAMP2-204ENST00000563829 IPO4Q8TEX9 1081 aaKnown RBP15□□□□□ -0.01
SCAMP2-204ENST00000563829 SPTLC3Q9NUV7 552 aa15□□□□□ -0.01
SCAMP2-204ENST00000563829 PHF14O94880 888 aa15□□□□□ -0.01
SCAMP2-204ENST00000563829 KCNJ4P48050 445 aa15□□□□□ -0.01
SCAMP2-204ENST00000563829 ZNF518AQ6AHZ1 1483 aa14.99□□□□□ -0.01
SCAMP2-204ENST00000563829 SMARCA5O60264 1052 aaPredicted RBP14.99□□□□□ -0.01
SCAMP2-204ENST00000563829 NEK4P51957 841 aa14.99□□□□□ -0.01
SCAMP2-204ENST00000563829 ANKRD7Q92527 254 aa14.99□□□□□ -0.01
SCAMP2-204ENST00000563829 UNC13BO14795 1591 aa14.99□□□□□ -0.01
SCAMP2-204ENST00000563829 ABCC11Q96J66 1382 aa14.99□□□□□ -0.01
SCAMP2-204ENST00000563829 SPC24Q8NBT2 197 aa14.99□□□□□ -0.01
SCAMP2-204ENST00000563829 ELL2O00472 640 aaPredicted RBP14.98□□□□□ -0.01
SCAMP2-204ENST00000563829 PYCARDQ9ULZ3 195 aa14.98□□□□□ -0.01
SCAMP2-204ENST00000563829 ATP10AO60312 1499 aa14.98□□□□□ -0.01
SCAMP2-204ENST00000563829 TTC22Q5TAA0 569 aa14.98□□□□□ -0.01
SCAMP2-204ENST00000563829 OTUD7AQ8TE49 926 aaPredicted RBP14.98□□□□□ -0.01
SCAMP2-204ENST00000563829 TMX3Q96JJ7 454 aa14.98□□□□□ -0.01
SCAMP2-204ENST00000563829 OGFRQ9NZT2 677 aa14.98□□□□□ -0.01
SCAMP2-204ENST00000563829 ATP10BO94823 1461 aa14.97□□□□□ -0.01
SCAMP2-204ENST00000563829 FAM184AQ8NB25 1140 aa14.97□□□□□ -0.01
SCAMP2-204ENST00000563829 FEZ1Q99689 392 aa14.97□□□□□ -0.01
SCAMP2-204ENST00000563829 TTC37Q6PGP7 1564 aa14.97□□□□□ -0.01
SCAMP2-204ENST00000563829 SAMD9LQ8IVG5 1584 aa14.97□□□□□ -0.01
SCAMP2-204ENST00000563829 IQGAP3Q86VI3 1631 aa14.97□□□□□ -0.01
SCAMP2-204ENST00000563829 CASC1Q6TDU7 716 aa14.97□□□□□ -0.01
SCAMP2-204ENST00000563829 CD109Q6YHK3 1445 aa14.97□□□□□ -0.01
SCAMP2-204ENST00000563829 BRD1O95696 1058 aa14.96□□□□□ -0.01
SCAMP2-204ENST00000563829 UVSSAQ2YD98 709 aa14.96□□□□□ -0.01
SCAMP2-204ENST00000563829 USP48Q86UV5 1035 aa14.96□□□□□ -0.01
SCAMP2-204ENST00000563829 KIAA1524Q8TCG1 905 aa14.96□□□□□ -0.01
SCAMP2-204ENST00000563829 TRAK1Q9UPV9 953 aa14.96□□□□□ -0.01
SCAMP2-204ENST00000563829 SYCP2Q9BX26 1530 aa14.96□□□□□ -0.02
SCAMP2-204ENST00000563829 SDSP20132 328 aa14.95□□□□□ -0.02
SCAMP2-204ENST00000563829 IRX5P78411 483 aaPredicted RBP14.95□□□□□ -0.02
SCAMP2-204ENST00000563829 ATAD2Q6PL18 1390 aa14.95□□□□□ -0.02
SCAMP2-204ENST00000563829 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
SCAMP2-204ENST00000563829 NCBP1Q09161 790 aaKnown RBP14.95□□□□□ -0.02
SCAMP2-204ENST00000563829 PTPRTO14522 1441 aa14.94□□□□□ -0.02
SCAMP2-204ENST00000563829 ADGRF5Q8IZF2 1346 aa14.94□□□□□ -0.02
SCAMP2-204ENST00000563829 NAA30Q147X3 362 aaPredicted RBP14.94□□□□□ -0.02
SCAMP2-204ENST00000563829 ALDH1L2Q3SY69 923 aa14.94□□□□□ -0.02
SCAMP2-204ENST00000563829 PLEKHF1Q96S99 279 aa14.94□□□□□ -0.02
SCAMP2-204ENST00000563829 KCNF1Q9H3M0 494 aa14.94□□□□□ -0.02
SCAMP2-204ENST00000563829 KDM4AO75164 1064 aa14.94□□□□□ -0.02
SCAMP2-204ENST00000563829 CFAP44Q96MT7 982 aa14.94□□□□□ -0.02
SCAMP2-204ENST00000563829 REC8O95072 547 aa14.93□□□□□ -0.02
SCAMP2-204ENST00000563829 JPH4Q96JJ6 628 aa14.93□□□□□ -0.02
SCAMP2-204ENST00000563829 CTIFO43310 598 aaKnown RBP14.93□□□□□ -0.02
SCAMP2-204ENST00000563829 ERICH4A6NGS2 130 aa14.93□□□□□ -0.02
SCAMP2-204ENST00000563829 CHMP7Q8WUX9 453 aaPredicted RBP14.93□□□□□ -0.02
SCAMP2-204ENST00000563829 SLFN14P0C7P3 912 aa14.92□□□□□ -0.02
SCAMP2-204ENST00000563829 CTNNA3Q9UI47 895 aa14.92□□□□□ -0.02
SCAMP2-204ENST00000563829 CARMIL2Q6F5E8 1435 aa14.92□□□□□ -0.02
SCAMP2-204ENST00000563829 NCBP3Q53F19 620 aaKnown RBP14.92□□□□□ -0.02
SCAMP2-204ENST00000563829 MAST1Q9Y2H9 1570 aa14.91□□□□□ -0.02
SCAMP2-204ENST00000563829 GABPB1Q06547 395 aaPredicted RBP14.91□□□□□ -0.02
SCAMP2-204ENST00000563829 C16orf45Q96MC5 204 aaPredicted RBP14.91□□□□□ -0.02
SCAMP2-204ENST00000563829 CCDC183Q5T5S1 534 aa14.91□□□□□ -0.02
SCAMP2-204ENST00000563829 DUOX2Q9NRD8 1548 aa14.91□□□□□ -0.02
SCAMP2-204ENST00000563829 AP5Z1O43299 807 aa14.9□□□□□ -0.02
SCAMP2-204ENST00000563829 TSPYL6Q8N831 410 aa14.9□□□□□ -0.02
SCAMP2-204ENST00000563829 ANKRD36BQ8N2N9 1353 aa14.9□□□□□ -0.02
SCAMP2-204ENST00000563829 IL16Q14005 1332 aa14.9□□□□□ -0.02
SCAMP2-204ENST00000563829 ERC2O15083 957 aa14.9□□□□□ -0.02
SCAMP2-204ENST00000563829 GIMAP6Q6P9H5 292 aa14.9□□□□□ -0.02
SCAMP2-204ENST00000563829 SPHKAPQ2M3C7 1700 aa14.9□□□□□ -0.02
SCAMP2-204ENST00000563829 CCDC66A2RUB6 948 aa14.89□□□□□ -0.03
SCAMP2-204ENST00000563829 THUMPD2Q9BTF0 503 aaKnown RBP14.89□□□□□ -0.03
SCAMP2-204ENST00000563829 CHMP4AQ9BY43 222 aa14.89□□□□□ -0.03
SCAMP2-204ENST00000563829 MRPL50Q8N5N7 158 aaKnown RBP14.89□□□□□ -0.03
SCAMP2-204ENST00000563829 TRERF1Q96PN7 1200 aa14.89□□□□□ -0.03
SCAMP2-204ENST00000563829 ABCA8O94911 1581 aa14.89□□□□□ -0.03
SCAMP2-204ENST00000563829 MED14O60244 1454 aa14.89□□□□□ -0.03
SCAMP2-204ENST00000563829 DDX41Q9UJV9 622 aaKnown RBP14.89□□□□□ -0.03
SCAMP2-204ENST00000563829 CNPY2Q9Y2B0 182 aa14.89□□□□□ -0.03
SCAMP2-204ENST00000563829 MX1P20591 662 aa14.88□□□□□ -0.03
SCAMP2-204ENST00000563829 DCTPP1Q9H773 170 aa14.88□□□□□ -0.03
SCAMP2-204ENST00000563829 SPAG9O60271 1321 aaKnown RBP14.88□□□□□ -0.03
SCAMP2-204ENST00000563829 ARHGAP5Q13017 1502 aa14.88□□□□□ -0.03
SCAMP2-204ENST00000563829 CDC42BPBQ9Y5S2 1711 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms