RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 IRF5Q13568 498 aa6.08□□□□□ -1.44
CHD9-207ENST00000562806 PROSER2Q86WR7 435 aaPredicted RBP6.08□□□□□ -1.44
CHD9-207ENST00000562806 KCTD15Q96SI1 283 aaPredicted RBP6.08□□□□□ -1.44
CHD9-207ENST00000562806 OCSTAMPQ9BR26 566 aa6.08□□□□□ -1.44
CHD9-207ENST00000562806 PCDHB9Q9Y5E1 797 aa6.08□□□□□ -1.44
CHD9-207ENST00000562806 SMPD1P17405 629 aa6.07□□□□□ -1.44
CHD9-207ENST00000562806 EMILIN1Q9Y6C2 1016 aa6.07□□□□□ -1.44
CHD9-207ENST00000562806 TLL2Q9Y6L7 1015 aa6.07□□□□□ -1.44
CHD9-207ENST00000562806 J3QL48 77 aa6.06□□□□□ -1.44
CHD9-207ENST00000562806 GRM5P41594 1212 aa6.06□□□□□ -1.44
CHD9-207ENST00000562806 SMCPP49901 116 aaPredicted RBP6.06□□□□□ -1.44
CHD9-207ENST00000562806 NNTQ13423 1086 aa6.06□□□□□ -1.44
CHD9-207ENST00000562806 CCDC116Q8IYX3 515 aa6.06□□□□□ -1.44
CHD9-207ENST00000562806 CRIPAKQ8N1N5 446 aa6.06□□□□□ -1.44
CHD9-207ENST00000562806 ZMYND15Q9H091 742 aa6.06□□□□□ -1.44
CHD9-207ENST00000562806 PGPEP1Q9NXJ5 209 aa6.06□□□□□ -1.44
CHD9-207ENST00000562806 ESPNB1AK53 854 aa6.05□□□□□ -1.44
CHD9-207ENST00000562806 FSHRP23945 695 aa6.05□□□□□ -1.44
CHD9-207ENST00000562806 VAC14Q08AM6 782 aa6.05□□□□□ -1.44
CHD9-207ENST00000562806 Q6ZNB5 142 aa6.05□□□□□ -1.44
CHD9-207ENST00000562806 POM121Q96HA1 1249 aa6.05□□□□□ -1.44
CHD9-207ENST00000562806 SLFNL1Q499Z3 407 aa6.04□□□□□ -1.44
CHD9-207ENST00000562806 FNBP4Q8N3X1 1017 aaPredicted RBP6.04□□□□□ -1.44
CHD9-207ENST00000562806 CEP126Q9P2H0 1117 aa6.04□□□□□ -1.44
CHD9-207ENST00000562806 AXIN1O15169 862 aa6.03□□□□□ -1.44
CHD9-207ENST00000562806 LZTS3O60299 673 aaPredicted RBP6.03□□□□□ -1.44
CHD9-207ENST00000562806 MAP7D1Q3KQU3 841 aa6.03□□□□□ -1.44
CHD9-207ENST00000562806 C14orf37Q86TY3 774 aa6.03□□□□□ -1.44
CHD9-207ENST00000562806 CLUAP1Q96AJ1 413 aa6.03□□□□□ -1.44
CHD9-207ENST00000562806 SIRT1Q96EB6 747 aa6.03□□□□□ -1.44
CHD9-207ENST00000562806 ESF1Q9H501 851 aaKnown RBP6.03□□□□□ -1.44
CHD9-207ENST00000562806 CAPN5O15484 640 aaPredicted RBP6.02□□□□□ -1.45
CHD9-207ENST00000562806 TRAK2O60296 914 aa6.02□□□□□ -1.45
CHD9-207ENST00000562806 WDR4P57081 412 aaKnown RBP6.02□□□□□ -1.45
CHD9-207ENST00000562806 INTS6LQ5JSJ4 861 aaKnown RBP6.02□□□□□ -1.45
CHD9-207ENST00000562806 TRAF7Q6Q0C0 670 aa6.02□□□□□ -1.45
CHD9-207ENST00000562806 NFATC2IPQ8NCF5 419 aa6.02□□□□□ -1.45
CHD9-207ENST00000562806 HPS1Q92902 700 aa6.02□□□□□ -1.45
CHD9-207ENST00000562806 GIGYF1O75420 1035 aaPredicted RBP6.01□□□□□ -1.45
CHD9-207ENST00000562806 UPP2O95045 317 aa6.01□□□□□ -1.45
CHD9-207ENST00000562806 MYT1Q01538 1121 aa6.01□□□□□ -1.45
CHD9-207ENST00000562806 PPP1R26Q5T8A7 1209 aaPredicted RBP6.01□□□□□ -1.45
CHD9-207ENST00000562806 ALG2Q9H553 416 aa6.01□□□□□ -1.45
CHD9-207ENST00000562806 ZIC2O95409 532 aaPredicted RBP6□□□□□ -1.45
CHD9-207ENST00000562806 RNF135Q8IUD6 432 aa6□□□□□ -1.45
CHD9-207ENST00000562806 KLF16Q9BXK1 252 aaPredicted RBP6□□□□□ -1.45
CHD9-207ENST00000562806 ERVH48-1M5A8F1 160 aa5.99□□□□□ -1.45
CHD9-207ENST00000562806 MYCP01106 439 aaPredicted RBP5.99□□□□□ -1.45
CHD9-207ENST00000562806 NR3C2P08235 984 aa5.99□□□□□ -1.45
CHD9-207ENST00000562806 TIMP2P16035 220 aa5.99□□□□□ -1.45
CHD9-207ENST00000562806 USP4Q13107 963 aa5.99□□□□□ -1.45
CHD9-207ENST00000562806 HDGFL1Q5TGJ6 251 aa5.99□□□□□ -1.45
CHD9-207ENST00000562806 SENP2Q9HC62 589 aa5.99□□□□□ -1.45
CHD9-207ENST00000562806 AAASQ9NRG9 546 aa5.99□□□□□ -1.45
CHD9-207ENST00000562806 SCARF1Q14162 830 aa5.98□□□□□ -1.45
CHD9-207ENST00000562806 PHTF2Q8N3S3 785 aa5.98□□□□□ -1.45
CHD9-207ENST00000562806 CALR3Q96L12 384 aaKnown RBP5.98□□□□□ -1.45
CHD9-207ENST00000562806 TSEN34Q9BSV6 310 aaKnown RBP5.98□□□□□ -1.45
CHD9-207ENST00000562806 CHIC2Q9UKJ5 165 aa5.98□□□□□ -1.45
CHD9-207ENST00000562806 DOLKQ9UPQ8 538 aa5.98□□□□□ -1.45
CHD9-207ENST00000562806 RAB15P59190 212 aa5.97□□□□□ -1.45
CHD9-207ENST00000562806 CC2D2BQ6DHV5 1058 aa5.97□□□□□ -1.45
CHD9-207ENST00000562806 Q6ZVU0 165 aa5.97□□□□□ -1.45
CHD9-207ENST00000562806 GLMNQ92990 594 aa5.97□□□□□ -1.45
CHD9-207ENST00000562806 KIFC2Q96AC6 838 aa5.97□□□□□ -1.45
CHD9-207ENST00000562806 ITPKCQ96DU7 683 aa5.97□□□□□ -1.45
CHD9-207ENST00000562806 PCDHB11Q9Y5F2 797 aa5.97□□□□□ -1.45
CHD9-207ENST00000562806 ERVK-9P63128 1117 aa5.96□□□□□ -1.46
CHD9-207ENST00000562806 CYP2U1Q7Z449 544 aa5.96□□□□□ -1.46
CHD9-207ENST00000562806 MEIOBQ8N635 442 aa5.96□□□□□ -1.46
CHD9-207ENST00000562806 ZNF784Q8NCA9 323 aaPredicted RBP5.96□□□□□ -1.46
CHD9-207ENST00000562806 POM121CA8CG34 1229 aa5.95□□□□□ -1.46
CHD9-207ENST00000562806 SKIP12755 728 aa5.95□□□□□ -1.46
CHD9-207ENST00000562806 EML3Q32P44 896 aa5.95□□□□□ -1.46
CHD9-207ENST00000562806 MRPL14Q6P1L8 145 aaKnown RBP5.95□□□□□ -1.46
CHD9-207ENST00000562806 PLPP7Q8NBV4 271 aa5.95□□□□□ -1.46
CHD9-207ENST00000562806 ATP9BO43861 1147 aa5.94□□□□□ -1.46
CHD9-207ENST00000562806 ADH1AP07327 375 aa5.94□□□□□ -1.46
CHD9-207ENST00000562806 TRIM50Q86XT4 487 aa5.94□□□□□ -1.46
CHD9-207ENST00000562806 PLEKHM2Q8IWE5 1019 aa5.94□□□□□ -1.46
CHD9-207ENST00000562806 ZFAND3Q9H8U3 227 aa5.94□□□□□ -1.46
CHD9-207ENST00000562806 ATP13A2Q9NQ11 1180 aa5.94□□□□□ -1.46
CHD9-207ENST00000562806 ZNF777Q9ULD5 760 aaPredicted RBP5.94□□□□□ -1.46
CHD9-207ENST00000562806 ATP5J2-PTCD1G3V325 749 aa5.93□□□□□ -1.46
CHD9-207ENST00000562806 LILRA1O75019 489 aa5.93□□□□□ -1.46
CHD9-207ENST00000562806 GNRH1P01148 92 aa5.93□□□□□ -1.46
CHD9-207ENST00000562806 ESCO1Q5FWF5 840 aa5.93□□□□□ -1.46
CHD9-207ENST00000562806 LINC00528Q8N1L1 170 aa5.93□□□□□ -1.46
CHD9-207ENST00000562806 CCDC85AQ96PX6 553 aaPredicted RBP5.93□□□□□ -1.46
CHD9-207ENST00000562806 CYLDQ9NQC7 956 aa5.93□□□□□ -1.46
CHD9-207ENST00000562806 TMPRSS4Q9NRS4 437 aa5.93□□□□□ -1.46
CHD9-207ENST00000562806 SERPINA10Q9UK55 444 aa5.93□□□□□ -1.46
CHD9-207ENST00000562806 NOD1Q9Y239 953 aa5.93□□□□□ -1.46
CHD9-207ENST00000562806 ST8SIA5O15466 376 aa5.92□□□□□ -1.46
CHD9-207ENST00000562806 BMP2P12643 396 aa5.92□□□□□ -1.46
CHD9-207ENST00000562806 ATP1A2P50993 1020 aa5.92□□□□□ -1.46
CHD9-207ENST00000562806 ADAMTS19Q8TE59 1207 aa5.92□□□□□ -1.46
CHD9-207ENST00000562806 CCDC97Q96F63 343 aaPredicted RBP5.92□□□□□ -1.46
CHD9-207ENST00000562806 USP17L5A8MUK1 530 aa5.91□□□□□ -1.46
CHD9-207ENST00000562806 SPINT1O43278 529 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms