RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 TRAK2O60296 914 aa6.01□□□□□ -1.45
TCF4-215ENST00000562638 TPM3P06753 285 aa6.01□□□□□ -1.45
TCF4-215ENST00000562638 HSPA5P11021 654 aaKnown RBP6.01□□□□□ -1.45
TCF4-215ENST00000562638 SSFA2P28290 1259 aa6.01□□□□□ -1.45
TCF4-215ENST00000562638 CYP2C19P33261 490 aa6.01□□□□□ -1.45
TCF4-215ENST00000562638 C8orf34Q49A92 452 aa6.01□□□□□ -1.45
TCF4-215ENST00000562638 DPY19L2Q6NUT2 758 aa6.01□□□□□ -1.45
TCF4-215ENST00000562638 FAM184AQ8NB25 1140 aa6.01□□□□□ -1.45
TCF4-215ENST00000562638 KLHL23Q8NBE8 558 aa6.01□□□□□ -1.45
TCF4-215ENST00000562638 SUDS3Q9H7L9 328 aaPredicted RBP6.01□□□□□ -1.45
TCF4-215ENST00000562638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.01□□□□□ -1.45
TCF4-215ENST00000562638 SYNPO2Q9UMS6 1093 aa6.01□□□□□ -1.45
TCF4-215ENST00000562638 JRKLQ9Y4A0 524 aa6.01□□□□□ -1.45
TCF4-215ENST00000562638 TNIKQ9UKE5 1360 aa6.01□□□□□ -1.45
TCF4-215ENST00000562638 NCOA2Q15596 1464 aa6.01□□□□□ -1.45
TCF4-215ENST00000562638 NLRP1Q9C000 1473 aa6.01□□□□□ -1.45
TCF4-215ENST00000562638 IL16Q14005 1332 aa6□□□□□ -1.45
TCF4-215ENST00000562638 SYNRGQ9UMZ2 1314 aa6□□□□□ -1.45
TCF4-215ENST00000562638 DDX11L8A8MPP1 907 aa6□□□□□ -1.45
TCF4-215ENST00000562638 SKILP12757 684 aa6□□□□□ -1.45
TCF4-215ENST00000562638 ERCC3P19447 782 aa6□□□□□ -1.45
TCF4-215ENST00000562638 ATP6V1AP38606 617 aa6□□□□□ -1.45
TCF4-215ENST00000562638 IRX1P78414 480 aaPredicted RBP6□□□□□ -1.45
TCF4-215ENST00000562638 FAM161AQ3B820 660 aa6□□□□□ -1.45
TCF4-215ENST00000562638 HDGFL1Q5TGJ6 251 aa6□□□□□ -1.45
TCF4-215ENST00000562638 JAKMIP3Q5VZ66 844 aa6□□□□□ -1.45
TCF4-215ENST00000562638 ILDR1Q86SU0 546 aaPredicted RBP6□□□□□ -1.45
TCF4-215ENST00000562638 CADPS2Q86UW7 1296 aa6□□□□□ -1.45
TCF4-215ENST00000562638 GAS2L3Q86XJ1 694 aa6□□□□□ -1.45
TCF4-215ENST00000562638 CCDC125Q86Z20 511 aa6□□□□□ -1.45
TCF4-215ENST00000562638 CACTIN-AS1Q8N1I8 211 aa6□□□□□ -1.45
TCF4-215ENST00000562638 NFATC2IPQ8NCF5 419 aa6□□□□□ -1.45
TCF4-215ENST00000562638 LSM14AQ8ND56 463 aaKnown RBP6□□□□□ -1.45
TCF4-215ENST00000562638 CCDC97Q96F63 343 aaPredicted RBP6□□□□□ -1.45
TCF4-215ENST00000562638 TACO1Q9BSH4 297 aaKnown RBP6□□□□□ -1.45
TCF4-215ENST00000562638 MMTAG2Q9BU76 263 aaKnown RBP6□□□□□ -1.45
TCF4-215ENST00000562638 KRTAP3-3Q9BYR6 98 aa6□□□□□ -1.45
TCF4-215ENST00000562638 KRTAP3-2Q9BYR7 98 aa6□□□□□ -1.45
TCF4-215ENST00000562638 UPF2Q9HAU5 1272 aaKnown RBP6□□□□□ -1.45
TCF4-215ENST00000562638 BCL2L12Q9HB09 334 aa6□□□□□ -1.45
TCF4-215ENST00000562638 CTNNA3Q9UI47 895 aa6□□□□□ -1.45
TCF4-215ENST00000562638 CEP164Q9UPV0 1460 aa6□□□□□ -1.45
TCF4-215ENST00000562638 USP19O94966 1318 aa5.99□□□□□ -1.45
TCF4-215ENST00000562638 RSF1Q96T23 1441 aaPredicted RBP5.99□□□□□ -1.45
TCF4-215ENST00000562638 C21orf2O43822 256 aa5.99□□□□□ -1.45
TCF4-215ENST00000562638 EIF3JO75822 258 aaKnown RBP5.99□□□□□ -1.45
TCF4-215ENST00000562638 ABCD1P33897 745 aa5.99□□□□□ -1.45
TCF4-215ENST00000562638 RBM5P52756 815 aaKnown RBP eCLIP5.99□□□□□ -1.45
TCF4-215ENST00000562638 EMP3P54852 163 aa5.99□□□□□ -1.45
TCF4-215ENST00000562638 XPCQ01831 940 aaPredicted RBP5.99□□□□□ -1.45
TCF4-215ENST00000562638 GOLGA2Q08379 1002 aa5.99□□□□□ -1.45
TCF4-215ENST00000562638 AMOTQ4VCS5 1084 aa5.99□□□□□ -1.45
TCF4-215ENST00000562638 C3orf67Q6ZVT6 689 aa5.99□□□□□ -1.45
TCF4-215ENST00000562638 MORC1Q86VD1 984 aa5.99□□□□□ -1.45
TCF4-215ENST00000562638 CEP89Q96ST8 783 aa5.99□□□□□ -1.45
TCF4-215ENST00000562638 MAF1Q9H063 256 aa5.99□□□□□ -1.45
TCF4-215ENST00000562638 ZNF446Q9NWS9 450 aa5.99□□□□□ -1.45
TCF4-215ENST00000562638 POLKQ9UBT6 870 aa5.99□□□□□ -1.45
TCF4-215ENST00000562638 SUN2Q9UH99 717 aa5.99□□□□□ -1.45
TCF4-215ENST00000562638 UHRF1BP1LA0JNW5 1464 aa5.98□□□□□ -1.45
TCF4-215ENST00000562638 DHX29Q7Z478 1369 aaKnown RBP5.98□□□□□ -1.45
TCF4-215ENST00000562638 FAM205CA6NFA0 338 aa5.98□□□□□ -1.45
TCF4-215ENST00000562638 PPFIA2O75334 1257 aa5.98□□□□□ -1.45
TCF4-215ENST00000562638 U2AF2P26368 475 aaKnown RBP eCLIP5.98□□□□□ -1.45
TCF4-215ENST00000562638 VASPP50552 380 aaPredicted RBP5.98□□□□□ -1.45
TCF4-215ENST00000562638 HNRNPH2P55795 449 aaKnown RBP5.98□□□□□ -1.45
TCF4-215ENST00000562638 ADCY2Q08462 1091 aa5.98□□□□□ -1.45
TCF4-215ENST00000562638 NOLC1Q14978 699 aaKnown RBP eCLIP5.98□□□□□ -1.45
TCF4-215ENST00000562638 DZIP3Q86Y13 1208 aaKnown RBP5.98□□□□□ -1.45
TCF4-215ENST00000562638 PROCA1Q8NCQ7 364 aaPredicted RBP5.98□□□□□ -1.45
TCF4-215ENST00000562638 HS3ST6Q96QI5 342 aa5.98□□□□□ -1.45
TCF4-215ENST00000562638 ETAA1Q9NY74 926 aa5.98□□□□□ -1.45
TCF4-215ENST00000562638 MTMR7Q9Y216 660 aa5.98□□□□□ -1.45
TCF4-215ENST00000562638 SPAG9O60271 1321 aaKnown RBP5.98□□□□□ -1.45
TCF4-215ENST00000562638 KTN1Q86UP2 1357 aaKnown RBP5.97□□□□□ -1.45
TCF4-215ENST00000562638 A0A1B0GUL7 405 aa5.97□□□□□ -1.45
TCF4-215ENST00000562638 TESPA1A2RU30 521 aaPredicted RBP5.97□□□□□ -1.45
TCF4-215ENST00000562638 H0YHG0 523 aa5.97□□□□□ -1.45
TCF4-215ENST00000562638 RAD21O60216 631 aa5.97□□□□□ -1.45
TCF4-215ENST00000562638 SARNPP82979 210 aaKnown RBP5.97□□□□□ -1.45
TCF4-215ENST00000562638 PPP2R5AQ15172 486 aa5.97□□□□□ -1.45
TCF4-215ENST00000562638 SF3A1Q15459 793 aaKnown RBP5.97□□□□□ -1.45
TCF4-215ENST00000562638 SKOR2Q2VWA4 1001 aaPredicted RBP5.97□□□□□ -1.45
TCF4-215ENST00000562638 MCTP2Q6DN12 878 aa5.97□□□□□ -1.45
TCF4-215ENST00000562638 AGAP3Q96P47 875 aa5.97□□□□□ -1.45
TCF4-215ENST00000562638 SPTLC3Q9NUV7 552 aa5.97□□□□□ -1.45
TCF4-215ENST00000562638 TBC1D2BQ9UPU7 963 aa5.97□□□□□ -1.45
TCF4-215ENST00000562638 PCDHGA4Q9Y5G9 962 aa5.97□□□□□ -1.45
TCF4-215ENST00000562638 NCOA3Q9Y6Q9 1424 aa5.97□□□□□ -1.45
TCF4-215ENST00000562638 KDM2BQ8NHM5 1336 aa5.97□□□□□ -1.45
TCF4-215ENST00000562638 PLEKHG2Q9H7P9 1386 aa5.96□□□□□ -1.45
TCF4-215ENST00000562638 ERICH3Q5RHP9 1530 aa5.96□□□□□ -1.46
TCF4-215ENST00000562638 GOLGA6L6A8MZA4 724 aa5.96□□□□□ -1.46
TCF4-215ENST00000562638 ZRANB2O95218 330 aaKnown RBP eCLIP5.96□□□□□ -1.46
TCF4-215ENST00000562638 BRD1O95696 1058 aa5.96□□□□□ -1.46
TCF4-215ENST00000562638 CPP00450 1065 aa5.96□□□□□ -1.46
TCF4-215ENST00000562638 NASPP49321 788 aaPredicted RBP5.96□□□□□ -1.46
TCF4-215ENST00000562638 TRAF1Q13077 416 aa5.96□□□□□ -1.46
TCF4-215ENST00000562638 ZNF280DQ6N043 979 aa5.96□□□□□ -1.46
TCF4-215ENST00000562638 GOLGA6L1Q8N7Z2 621 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms