RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 HMOX1P09601 288 aa13.29□□□□□ -0.28
TUBGCP4-202ENST00000561691 MAPK8IP3Q9UPT6 1336 aa13.28□□□□□ -0.28
TUBGCP4-202ENST00000561691 RARSP54136 660 aaKnown RBP13.28□□□□□ -0.28
TUBGCP4-202ENST00000561691 RIPK4P57078 832 aa13.28□□□□□ -0.28
TUBGCP4-202ENST00000561691 STRCP1A6NGW2 1772 aa13.27□□□□□ -0.28
TUBGCP4-202ENST00000561691 HSP90AB2PQ58FF8 381 aa13.27□□□□□ -0.28
TUBGCP4-202ENST00000561691 PHF8Q9UPP1 1060 aa13.27□□□□□ -0.28
TUBGCP4-202ENST00000561691 NFE2L2Q16236 605 aa13.27□□□□□ -0.29
TUBGCP4-202ENST00000561691 PNNQ9H307 717 aaKnown RBP13.27□□□□□ -0.29
TUBGCP4-202ENST00000561691 AEBP1Q8IUX7 1158 aa13.26□□□□□ -0.29
TUBGCP4-202ENST00000561691 TSR2Q969E8 191 aaKnown RBP13.26□□□□□ -0.29
TUBGCP4-202ENST00000561691 SBNO1A3KN83 1393 aa13.26□□□□□ -0.29
TUBGCP4-202ENST00000561691 KDM4FA0A1W2PPD8 638 aa13.25□□□□□ -0.29
TUBGCP4-202ENST00000561691 RTL5Q5HYW3 569 aaPredicted RBP13.25□□□□□ -0.29
TUBGCP4-202ENST00000561691 MYH16Q9H6N6 1097 aa13.25□□□□□ -0.29
TUBGCP4-202ENST00000561691 NFAT5O94916 1531 aa13.25□□□□□ -0.29
TUBGCP4-202ENST00000561691 FLT4P35916 1363 aa13.24□□□□□ -0.29
TUBGCP4-202ENST00000561691 ZNF853P0CG23 659 aa13.23□□□□□ -0.29
TUBGCP4-202ENST00000561691 RTN4Q9NQC3 1192 aaKnown RBP13.23□□□□□ -0.29
TUBGCP4-202ENST00000561691 KDRP35968 1356 aa13.23□□□□□ -0.29
TUBGCP4-202ENST00000561691 NLRP6P59044 892 aa13.23□□□□□ -0.29
TUBGCP4-202ENST00000561691 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
TUBGCP4-202ENST00000561691 ORAI2Q96SN7 254 aa13.23□□□□□ -0.29
TUBGCP4-202ENST00000561691 ARHGEF10O15013 1369 aa13.22□□□□□ -0.29
TUBGCP4-202ENST00000561691 KIF24Q5T7B8 1368 aa13.22□□□□□ -0.29
TUBGCP4-202ENST00000561691 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.22□□□□□ -0.29
TUBGCP4-202ENST00000561691 C1orf167Q5SNV9 1468 aa13.22□□□□□ -0.29
TUBGCP4-202ENST00000561691 LMTK3Q96Q04 1460 aa13.22□□□□□ -0.29
TUBGCP4-202ENST00000561691 KDM2BQ8NHM5 1336 aa13.22□□□□□ -0.29
TUBGCP4-202ENST00000561691 DLG5Q8TDM6 1919 aa13.22□□□□□ -0.29
TUBGCP4-202ENST00000561691 CT47B1P0C2W7 299 aaPredicted RBP13.21□□□□□ -0.29
TUBGCP4-202ENST00000561691 PDE3AQ14432 1141 aa13.21□□□□□ -0.29
TUBGCP4-202ENST00000561691 NUTM2GQ5VZR2 741 aa13.21□□□□□ -0.29
TUBGCP4-202ENST00000561691 THUMPD2Q9BTF0 503 aaKnown RBP13.21□□□□□ -0.29
TUBGCP4-202ENST00000561691 TNNQ9UQP3 1299 aa13.21□□□□□ -0.29
TUBGCP4-202ENST00000561691 TRPM3Q9HCF6 1732 aaPredicted RBP13.21□□□□□ -0.29
TUBGCP4-202ENST00000561691 SOX12O15370 315 aa13.21□□□□□ -0.3
TUBGCP4-202ENST00000561691 HSPA2P54652 639 aa13.21□□□□□ -0.3
TUBGCP4-202ENST00000561691 SULT6B1Q6IMI4 303 aa13.21□□□□□ -0.3
TUBGCP4-202ENST00000561691 PROSER2Q86WR7 435 aaPredicted RBP13.21□□□□□ -0.3
TUBGCP4-202ENST00000561691 IGSF1Q8N6C5 1336 aa13.21□□□□□ -0.3
TUBGCP4-202ENST00000561691 ESCO1Q5FWF5 840 aa13.2□□□□□ -0.3
TUBGCP4-202ENST00000561691 MST1RQ04912 1400 aa13.2□□□□□ -0.3
TUBGCP4-202ENST00000561691 RLBP1P12271 317 aa13.19□□□□□ -0.3
TUBGCP4-202ENST00000561691 HOXC9P31274 260 aa13.19□□□□□ -0.3
TUBGCP4-202ENST00000561691 ABTB2Q8N961 1025 aa13.19□□□□□ -0.3
TUBGCP4-202ENST00000561691 TMEM94Q12767 1356 aa13.19□□□□□ -0.3
TUBGCP4-202ENST00000561691 NCOA3Q9Y6Q9 1424 aa13.19□□□□□ -0.3
TUBGCP4-202ENST00000561691 SLIT3O75094 1523 aa13.19□□□□□ -0.3
TUBGCP4-202ENST00000561691 PHRF1Q9P1Y6 1649 aaKnown RBP13.19□□□□□ -0.3
TUBGCP4-202ENST00000561691 IPO9Q96P70 1041 aaKnown RBP13.19□□□□□ -0.3
TUBGCP4-202ENST00000561691 EYA1Q99502 592 aa13.19□□□□□ -0.3
TUBGCP4-202ENST00000561691 C19orf44Q9H6X5 657 aa13.19□□□□□ -0.3
TUBGCP4-202ENST00000561691 STRCQ7RTU9 1775 aa13.18□□□□□ -0.3
TUBGCP4-202ENST00000561691 FAM83GA6ND36 823 aa13.18□□□□□ -0.3
TUBGCP4-202ENST00000561691 PANK1Q8TE04 598 aa13.18□□□□□ -0.3
TUBGCP4-202ENST00000561691 PKNOX2Q96KN3 472 aa13.18□□□□□ -0.3
TUBGCP4-202ENST00000561691 BCL2L13Q9BXK5 485 aa13.18□□□□□ -0.3
TUBGCP4-202ENST00000561691 RTL1A6NKG5 1358 aa13.18□□□□□ -0.3
TUBGCP4-202ENST00000561691 DCCP43146 1447 aa13.17□□□□□ -0.3
TUBGCP4-202ENST00000561691 SSH1Q8WYL5 1049 aa13.17□□□□□ -0.3
TUBGCP4-202ENST00000561691 IFT57Q9NWB7 429 aa13.17□□□□□ -0.3
TUBGCP4-202ENST00000561691 KIF1AQ12756 1690 aa13.17□□□□□ -0.3
TUBGCP4-202ENST00000561691 USP19O94966 1318 aa13.16□□□□□ -0.3
TUBGCP4-202ENST00000561691 CRB1P82279 1406 aa13.16□□□□□ -0.3
TUBGCP4-202ENST00000561691 XIRP1Q702N8 1843 aaKnown RBP13.16□□□□□ -0.3
TUBGCP4-202ENST00000561691 FOXO3O43524 673 aa13.15□□□□□ -0.3
TUBGCP4-202ENST00000561691 AMPHP49418 695 aa13.15□□□□□ -0.3
TUBGCP4-202ENST00000561691 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
TUBGCP4-202ENST00000561691 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
TUBGCP4-202ENST00000561691 LTN1O94822 1766 aa13.15□□□□□ -0.3
TUBGCP4-202ENST00000561691 PSME1Q06323 249 aa13.15□□□□□ -0.3
TUBGCP4-202ENST00000561691 C14orf37Q86TY3 774 aa13.15□□□□□ -0.3
TUBGCP4-202ENST00000561691 ALS2Q96Q42 1657 aa13.14□□□□□ -0.31
TUBGCP4-202ENST00000561691 EIF5BO60841 1220 aaKnown RBP13.14□□□□□ -0.31
TUBGCP4-202ENST00000561691 NEFMP07197 916 aa13.14□□□□□ -0.31
TUBGCP4-202ENST00000561691 BRPF1P55201 1214 aaPredicted RBP13.14□□□□□ -0.31
TUBGCP4-202ENST00000561691 TSPYL6Q8N831 410 aa13.14□□□□□ -0.31
TUBGCP4-202ENST00000561691 IP6K1Q92551 441 aa13.14□□□□□ -0.31
TUBGCP4-202ENST00000561691 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
TUBGCP4-202ENST00000561691 COG6Q9Y2V7 657 aa13.14□□□□□ -0.31
TUBGCP4-202ENST00000561691 VAMP4O75379 141 aa13.13□□□□□ -0.31
TUBGCP4-202ENST00000561691 GNAI1P63096 354 aa13.13□□□□□ -0.31
TUBGCP4-202ENST00000561691 XPCQ01831 940 aaPredicted RBP13.13□□□□□ -0.31
TUBGCP4-202ENST00000561691 LMOD3Q0VAK6 560 aa13.13□□□□□ -0.31
TUBGCP4-202ENST00000561691 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
TUBGCP4-202ENST00000561691 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
TUBGCP4-202ENST00000561691 FRAT1Q92837 279 aaPredicted RBP13.13□□□□□ -0.31
TUBGCP4-202ENST00000561691 ANP32AP39687 249 aaKnown RBP13.13□□□□□ -0.31
TUBGCP4-202ENST00000561691 CALD1Q05682 793 aaKnown RBP13.13□□□□□ -0.31
TUBGCP4-202ENST00000561691 NCAPD2Q15021 1401 aa13.13□□□□□ -0.31
TUBGCP4-202ENST00000561691 MED1Q15648 1581 aaPredicted RBP13.13□□□□□ -0.31
TUBGCP4-202ENST00000561691 LRRC37A3O60309 1634 aa13.12□□□□□ -0.31
TUBGCP4-202ENST00000561691 ALDH1L2Q3SY69 923 aa13.12□□□□□ -0.31
TUBGCP4-202ENST00000561691 MSH6P52701 1360 aa13.12□□□□□ -0.31
TUBGCP4-202ENST00000561691 CHL1O00533 1208 aa13.11□□□□□ -0.31
TUBGCP4-202ENST00000561691 TRIM27P14373 513 aa13.11□□□□□ -0.31
TUBGCP4-202ENST00000561691 KRT28Q7Z3Y7 464 aa13.11□□□□□ -0.31
TUBGCP4-202ENST00000561691 ARHGEF25Q86VW2 580 aa13.11□□□□□ -0.31
TUBGCP4-202ENST00000561691 C8orf58Q8NAV2 365 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms