RNA–Protein interactions for RNA: ENST00000561521.1

LINC00662-201, long intergenic non-protein coding RNA 662, humanhuman

TSL 2 BASIC

Gene LINC00662, Length 2,480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-201ENST00000561521 RBSNQ9H1K0 784 aa12.19□□□□□ -0.46
LINC00662-201ENST00000561521 RSPH14Q9UHP6 348 aa12.19□□□□□ -0.46
LINC00662-201ENST00000561521 RAPGEF3O95398 923 aa12.18□□□□□ -0.46
LINC00662-201ENST00000561521 CASQ1P31415 396 aa12.18□□□□□ -0.46
LINC00662-201ENST00000561521 MTUS2Q5JR59 1369 aa12.18□□□□□ -0.46
LINC00662-201ENST00000561521 PRR29P0C7W0 189 aa12.18□□□□□ -0.46
LINC00662-201ENST00000561521 CHMP4CQ96CF2 233 aa12.18□□□□□ -0.46
LINC00662-201ENST00000561521 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC00662-201ENST00000561521 RPRD2Q5VT52 1461 aaKnown RBP12.17□□□□□ -0.46
LINC00662-201ENST00000561521 PIAS4Q8N2W9 510 aaPredicted RBP12.17□□□□□ -0.46
LINC00662-201ENST00000561521 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
LINC00662-201ENST00000561521 GPATCH8Q9UKJ3 1502 aaKnown RBP12.17□□□□□ -0.46
LINC00662-201ENST00000561521 PLEKHH1Q9ULM0 1364 aa12.17□□□□□ -0.46
LINC00662-201ENST00000561521 HECW2Q9P2P5 1572 aa12.17□□□□□ -0.46
LINC00662-201ENST00000561521 KIF3CO14782 793 aa12.17□□□□□ -0.46
LINC00662-201ENST00000561521 ZSCAN23Q3MJ62 389 aa12.17□□□□□ -0.46
LINC00662-201ENST00000561521 NLRP13Q86W25 1043 aa12.17□□□□□ -0.46
LINC00662-201ENST00000561521 MLH3Q9UHC1 1453 aa12.17□□□□□ -0.46
LINC00662-201ENST00000561521 TPM3P06753 285 aa12.16□□□□□ -0.46
LINC00662-201ENST00000561521 GSCP56915 257 aaPredicted RBP12.16□□□□□ -0.46
LINC00662-201ENST00000561521 TRDNQ13061 729 aa12.16□□□□□ -0.46
LINC00662-201ENST00000561521 UVSSAQ2YD98 709 aa12.16□□□□□ -0.46
LINC00662-201ENST00000561521 LRSAM1Q6UWE0 723 aa12.16□□□□□ -0.46
LINC00662-201ENST00000561521 KIF18AQ8NI77 898 aa12.16□□□□□ -0.46
LINC00662-201ENST00000561521 DDX49Q9Y6V7 483 aaKnown RBP12.16□□□□□ -0.46
LINC00662-201ENST00000561521 PLXNC1O60486 1568 aa12.16□□□□□ -0.46
LINC00662-201ENST00000561521 ZKSCAN8Q15776 578 aaPredicted RBP12.16□□□□□ -0.46
LINC00662-201ENST00000561521 SWT1Q5T5J6 900 aaKnown RBP12.16□□□□□ -0.46
LINC00662-201ENST00000561521 GOLGA6L1Q8N7Z2 621 aa12.16□□□□□ -0.46
LINC00662-201ENST00000561521 C22orf23Q9BZE7 217 aa12.16□□□□□ -0.46
LINC00662-201ENST00000561521 PARD3Q8TEW0 1356 aa12.16□□□□□ -0.46
LINC00662-201ENST00000561521 SH3BP1Q9Y3L3 701 aa12.15□□□□□ -0.46
LINC00662-201ENST00000561521 SAMD9LQ8IVG5 1584 aa12.15□□□□□ -0.46
LINC00662-201ENST00000561521 ATP10AO60312 1499 aa12.15□□□□□ -0.46
LINC00662-201ENST00000561521 SSR1P43307 286 aaKnown RBP12.15□□□□□ -0.46
LINC00662-201ENST00000561521 CCDC91Q7Z6B0 441 aa12.15□□□□□ -0.46
LINC00662-201ENST00000561521 KNSTRNQ9Y448 316 aa12.15□□□□□ -0.46
LINC00662-201ENST00000561521 SUPT6HQ7KZ85 1726 aaKnown RBP12.15□□□□□ -0.47
LINC00662-201ENST00000561521 C9orf84Q5VXU9 1444 aa12.15□□□□□ -0.47
LINC00662-201ENST00000561521 GOLIM4O00461 696 aa12.14□□□□□ -0.47
LINC00662-201ENST00000561521 HNRNPH2P55795 449 aaKnown RBP12.14□□□□□ -0.47
LINC00662-201ENST00000561521 SLFNL1Q499Z3 407 aa12.14□□□□□ -0.47
LINC00662-201ENST00000561521 KANK1Q14678 1352 aa12.14□□□□□ -0.47
LINC00662-201ENST00000561521 NCBP1Q09161 790 aaKnown RBP12.14□□□□□ -0.47
LINC00662-201ENST00000561521 TXLNBQ8N3L3 684 aa12.14□□□□□ -0.47
LINC00662-201ENST00000561521 FGD6Q6ZV73 1430 aa12.14□□□□□ -0.47
LINC00662-201ENST00000561521 MBD5Q9P267 1494 aa12.13□□□□□ -0.47
LINC00662-201ENST00000561521 ARHGEF12Q9NZN5 1544 aa12.13□□□□□ -0.47
LINC00662-201ENST00000561521 FAM50AQ14320 339 aaKnown RBP12.13□□□□□ -0.47
LINC00662-201ENST00000561521 DIP2CQ9Y2E4 1556 aa12.13□□□□□ -0.47
LINC00662-201ENST00000561521 SIGLEC1Q9BZZ2 1709 aa12.13□□□□□ -0.47
LINC00662-201ENST00000561521 RIOK3O14730 519 aaKnown RBP12.13□□□□□ -0.47
LINC00662-201ENST00000561521 TSC1Q92574 1164 aa12.13□□□□□ -0.47
LINC00662-201ENST00000561521 KIF1BPQ96EK5 621 aa12.13□□□□□ -0.47
LINC00662-201ENST00000561521 AGLP35573 1532 aa12.12□□□□□ -0.47
LINC00662-201ENST00000561521 ZNF853P0CG23 659 aa12.12□□□□□ -0.47
LINC00662-201ENST00000561521 PDE3AQ14432 1141 aa12.12□□□□□ -0.47
LINC00662-201ENST00000561521 SUGP1Q8IWZ8 645 aaKnown RBP12.12□□□□□ -0.47
LINC00662-201ENST00000561521 PMFBP1Q8TBY8 1022 aa12.12□□□□□ -0.47
LINC00662-201ENST00000561521 CAMSAP2Q08AD1 1489 aa12.12□□□□□ -0.47
LINC00662-201ENST00000561521 SCAF11Q99590 1463 aaKnown RBP12.12□□□□□ -0.47
LINC00662-201ENST00000561521 BAG4O95429 457 aaKnown RBP12.12□□□□□ -0.47
LINC00662-201ENST00000561521 FAM184AQ8NB25 1140 aa12.12□□□□□ -0.47
LINC00662-201ENST00000561521 ZNF397Q8NF99 534 aaPredicted RBP12.12□□□□□ -0.47
LINC00662-201ENST00000561521 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
LINC00662-201ENST00000561521 IRF6O14896 467 aa12.11□□□□□ -0.47
LINC00662-201ENST00000561521 ZBTB9Q96C00 473 aa12.11□□□□□ -0.47
LINC00662-201ENST00000561521 CWC15Q9P013 229 aaKnown RBP12.11□□□□□ -0.47
LINC00662-201ENST00000561521 ABCA6Q8N139 1617 aa12.11□□□□□ -0.47
LINC00662-201ENST00000561521 PPP1R12AO14974 1030 aaPredicted RBP12.11□□□□□ -0.47
LINC00662-201ENST00000561521 NBPF6Q5VWK0 638 aa12.11□□□□□ -0.47
LINC00662-201ENST00000561521 NBPF5PQ86XG9 351 aaPredicted RBP12.11□□□□□ -0.47
LINC00662-201ENST00000561521 ZNF592Q92610 1267 aa12.11□□□□□ -0.47
LINC00662-201ENST00000561521 NBPF4Q96M43 638 aa12.11□□□□□ -0.47
LINC00662-201ENST00000561521 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.11□□□□□ -0.47
LINC00662-201ENST00000561521 MADDQ8WXG6 1647 aa12.11□□□□□ -0.47
LINC00662-201ENST00000561521 KIDINS220Q9ULH0 1771 aa12.1□□□□□ -0.47
LINC00662-201ENST00000561521 A0A1B0GUL7 405 aa12.1□□□□□ -0.47
LINC00662-201ENST00000561521 TACO1Q9BSH4 297 aaKnown RBP12.1□□□□□ -0.47
LINC00662-201ENST00000561521 TERF2IPQ9NYB0 399 aa12.1□□□□□ -0.47
LINC00662-201ENST00000561521 TRAPPC8Q9Y2L5 1435 aa12.1□□□□□ -0.47
LINC00662-201ENST00000561521 INO80Q9ULG1 1556 aaPredicted RBP12.1□□□□□ -0.47
LINC00662-201ENST00000561521 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.1□□□□□ -0.47
LINC00662-201ENST00000561521 SMTNL1A8MU46 457 aa12.1□□□□□ -0.47
LINC00662-201ENST00000561521 ATP2B1P20020 1258 aa12.1□□□□□ -0.47
LINC00662-201ENST00000561521 TDO2P48775 406 aa12.1□□□□□ -0.47
LINC00662-201ENST00000561521 PRIM1P49642 420 aaKnown RBP12.1□□□□□ -0.47
LINC00662-201ENST00000561521 C11orf91Q3C1V1 193 aa12.1□□□□□ -0.47
LINC00662-201ENST00000561521 CXorf56Q9H5V9 222 aa12.1□□□□□ -0.47
LINC00662-201ENST00000561521 ATG3Q9NT62 314 aa12.1□□□□□ -0.47
LINC00662-201ENST00000561521 JRKLQ9Y4A0 524 aa12.1□□□□□ -0.47
LINC00662-201ENST00000561521 CCDC189A1A4V9 331 aa12.09□□□□□ -0.47
LINC00662-201ENST00000561521 RABEP1Q15276 862 aa12.09□□□□□ -0.47
LINC00662-201ENST00000561521 JARID2Q92833 1246 aaPredicted RBP12.09□□□□□ -0.47
LINC00662-201ENST00000561521 SYCP2Q9BX26 1530 aa12.09□□□□□ -0.47
LINC00662-201ENST00000561521 PTPRMP28827 1452 aa12.09□□□□□ -0.47
LINC00662-201ENST00000561521 MLECQ14165 292 aa12.09□□□□□ -0.47
LINC00662-201ENST00000561521 NOM1Q5C9Z4 860 aaKnown RBP12.09□□□□□ -0.47
LINC00662-201ENST00000561521 RNF20Q5VTR2 975 aa12.09□□□□□ -0.47
LINC00662-201ENST00000561521 DUSP27Q5VZP5 1158 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms