RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 GNAT3A8MTJ3 354 aa20.28■□□□□ 0.84
AP4E1-205ENST00000561393 ALDH1L2Q3SY69 923 aa20.28■□□□□ 0.84
AP4E1-205ENST00000561393 ANP32BQ92688 251 aaKnown RBP20.28■□□□□ 0.84
AP4E1-205ENST00000561393 ZMYM4Q5VZL5 1548 aa20.27■□□□□ 0.84
AP4E1-205ENST00000561393 ARHGAP31Q2M1Z3 1444 aa20.27■□□□□ 0.84
AP4E1-205ENST00000561393 MSH5O43196 834 aa20.27■□□□□ 0.83
AP4E1-205ENST00000561393 KCNH5Q8NCM2 988 aa20.27■□□□□ 0.83
AP4E1-205ENST00000561393 HDAC5Q9UQL6 1122 aa20.26■□□□□ 0.83
AP4E1-205ENST00000561393 MADDQ8WXG6 1647 aa20.26■□□□□ 0.83
AP4E1-205ENST00000561393 IL16Q14005 1332 aa20.26■□□□□ 0.83
AP4E1-205ENST00000561393 PCDHB15Q9Y5E8 787 aa20.26■□□□□ 0.83
AP4E1-205ENST00000561393 CEP152O94986 1710 aa20.26■□□□□ 0.83
AP4E1-205ENST00000561393 RSPH6AQ9H0K4 717 aa20.26■□□□□ 0.83
AP4E1-205ENST00000561393 SYNMO15061 1565 aa20.26■□□□□ 0.83
AP4E1-205ENST00000561393 KIAA1211Q6ZU35 1233 aa20.25■□□□□ 0.83
AP4E1-205ENST00000561393 UBTFL1P0CB47 393 aaPredicted RBP20.24■□□□□ 0.83
AP4E1-205ENST00000561393 C22orf23Q9BZE7 217 aa20.24■□□□□ 0.83
AP4E1-205ENST00000561393 KIDINS220Q9ULH0 1771 aa20.24■□□□□ 0.83
AP4E1-205ENST00000561393 PRKCSHP14314 528 aaPredicted RBP20.24■□□□□ 0.83
AP4E1-205ENST00000561393 TTC21AQ8NDW8 1320 aa20.24■□□□□ 0.83
AP4E1-205ENST00000561393 TSPYL6Q8N831 410 aa20.24■□□□□ 0.83
AP4E1-205ENST00000561393 NEXNQ0ZGT2 675 aa20.23■□□□□ 0.83
AP4E1-205ENST00000561393 NOL8Q76FK4 1167 aaKnown RBP20.23■□□□□ 0.83
AP4E1-205ENST00000561393 TRIM35Q9UPQ4 493 aa20.23■□□□□ 0.83
AP4E1-205ENST00000561393 MAP3K19Q56UN5 1328 aa20.22■□□□□ 0.83
AP4E1-205ENST00000561393 PPRC1Q5VV67 1664 aaKnown RBP20.22■□□□□ 0.83
AP4E1-205ENST00000561393 C8orf58Q8NAV2 365 aa20.22■□□□□ 0.83
AP4E1-205ENST00000561393 F6X3S4 739 aa20.22■□□□□ 0.83
AP4E1-205ENST00000561393 INSRP06213 1382 aa20.22■□□□□ 0.83
AP4E1-205ENST00000561393 EDC4Q6P2E9 1401 aaKnown RBP20.22■□□□□ 0.83
AP4E1-205ENST00000561393 GCC1Q96CN9 775 aa20.22■□□□□ 0.83
AP4E1-205ENST00000561393 STRN4Q9NRL3 753 aa20.21■□□□□ 0.83
AP4E1-205ENST00000561393 ZFYVE9O95405 1425 aa20.21■□□□□ 0.83
AP4E1-205ENST00000561393 IL13P35225 146 aa20.21■□□□□ 0.83
AP4E1-205ENST00000561393 KRT24Q2M2I5 525 aa20.21■□□□□ 0.83
AP4E1-205ENST00000561393 GNAI3P08754 354 aa20.21■□□□□ 0.83
AP4E1-205ENST00000561393 TATP17735 454 aaPredicted RBP20.21■□□□□ 0.83
AP4E1-205ENST00000561393 DDX58O95786 925 aaKnown RBP20.2■□□□□ 0.82
AP4E1-205ENST00000561393 KRT28Q7Z3Y7 464 aa20.2■□□□□ 0.82
AP4E1-205ENST00000561393 CHD1LQ86WJ1 897 aa20.2■□□□□ 0.82
AP4E1-205ENST00000561393 FGD1P98174 961 aa20.19■□□□□ 0.82
AP4E1-205ENST00000561393 GZF1Q9H116 711 aaPredicted RBP20.19■□□□□ 0.82
AP4E1-205ENST00000561393 MPRIPQ6WCQ1 1025 aa20.19■□□□□ 0.82
AP4E1-205ENST00000561393 PRDM11Q9NQV5 511 aa20.19■□□□□ 0.82
AP4E1-205ENST00000561393 RIC3Q7Z5B4 369 aa20.19■□□□□ 0.82
AP4E1-205ENST00000561393 SYTL4Q96C24 671 aaPredicted RBP20.19■□□□□ 0.82
AP4E1-205ENST00000561393 BTBD11A6QL63 1104 aa20.18■□□□□ 0.82
AP4E1-205ENST00000561393 GNAI2P04899 355 aa20.18■□□□□ 0.82
AP4E1-205ENST00000561393 ADGRB3O60242 1522 aa20.18■□□□□ 0.82
AP4E1-205ENST00000561393 ABCA6Q8N139 1617 aa20.18■□□□□ 0.82
AP4E1-205ENST00000561393 LMTK2Q8IWU2 1503 aa20.18■□□□□ 0.82
AP4E1-205ENST00000561393 TAF7Q15545 349 aaPredicted RBP20.18■□□□□ 0.82
AP4E1-205ENST00000561393 SURF6O75683 361 aaKnown RBP20.17■□□□□ 0.82
AP4E1-205ENST00000561393 GPATCH3Q96I76 525 aa20.17■□□□□ 0.82
AP4E1-205ENST00000561393 CCT4P50991 539 aaKnown RBP20.17■□□□□ 0.82
AP4E1-205ENST00000561393 EYA1Q99502 592 aa20.17■□□□□ 0.82
AP4E1-205ENST00000561393 DIP2CQ9Y2E4 1556 aa20.17■□□□□ 0.82
AP4E1-205ENST00000561393 MTHFSDQ2M296 383 aaKnown RBP20.17■□□□□ 0.82
AP4E1-205ENST00000561393 ZNF521Q96K83 1311 aa20.16■□□□□ 0.82
AP4E1-205ENST00000561393 VAMP4O75379 141 aa20.16■□□□□ 0.82
AP4E1-205ENST00000561393 HSPA2P54652 639 aa20.16■□□□□ 0.82
AP4E1-205ENST00000561393 TOM1L2Q6ZVM7 507 aa20.16■□□□□ 0.82
AP4E1-205ENST00000561393 NPHP1O15259 732 aa20.16■□□□□ 0.82
AP4E1-205ENST00000561393 ROBO2Q9HCK4 1378 aa20.15■□□□□ 0.82
AP4E1-205ENST00000561393 TAOK2Q9UL54 1235 aa20.15■□□□□ 0.82
AP4E1-205ENST00000561393 NAP1L2Q9ULW6 460 aaPredicted RBP20.15■□□□□ 0.82
AP4E1-205ENST00000561393 PLEKHG3A1L390 1219 aa20.14■□□□□ 0.82
AP4E1-205ENST00000561393 A2ML1A8K2U0 1454 aa20.14■□□□□ 0.81
AP4E1-205ENST00000561393 FLT4P35916 1363 aa20.14■□□□□ 0.81
AP4E1-205ENST00000561393 TAF7LQ5H9L4 462 aa20.14■□□□□ 0.81
AP4E1-205ENST00000561393 SRCIN1Q9C0H9 1055 aa20.14■□□□□ 0.81
AP4E1-205ENST00000561393 SIRT1Q96EB6 747 aa20.13■□□□□ 0.81
AP4E1-205ENST00000561393 PRR36Q9H6K5 1346 aa20.13■□□□□ 0.81
AP4E1-205ENST00000561393 DDX54Q8TDD1 881 aaKnown RBP20.13■□□□□ 0.81
AP4E1-205ENST00000561393 CDC45O75419 566 aa20.13■□□□□ 0.81
AP4E1-205ENST00000561393 ORAI2Q96SN7 254 aa20.12■□□□□ 0.81
AP4E1-205ENST00000561393 LRRC59Q96AG4 307 aaKnown RBP20.12■□□□□ 0.81
AP4E1-205ENST00000561393 ANO2Q9NQ90 1003 aa20.12■□□□□ 0.81
AP4E1-205ENST00000561393 GORABQ5T7V8 394 aa20.12■□□□□ 0.81
AP4E1-205ENST00000561393 EXOC6BQ9Y2D4 811 aa20.12■□□□□ 0.81
AP4E1-205ENST00000561393 REC8O95072 547 aa20.11■□□□□ 0.81
AP4E1-205ENST00000561393 CHRNA2Q15822 529 aa20.11■□□□□ 0.81
AP4E1-205ENST00000561393 RIMBP3CA6NJZ7 1639 aa20.11■□□□□ 0.81
AP4E1-205ENST00000561393 RIMBP3BA6NNM3 1639 aa20.11■□□□□ 0.81
AP4E1-205ENST00000561393 RIMBP3Q9UFD9 1639 aa20.11■□□□□ 0.81
AP4E1-205ENST00000561393 MYL6BP14649 208 aa20.11■□□□□ 0.81
AP4E1-205ENST00000561393 INTS3Q68E01 1043 aaKnown RBP20.11■□□□□ 0.81
AP4E1-205ENST00000561393 ST18O60284 1047 aa20.11■□□□□ 0.81
AP4E1-205ENST00000561393 RPAP2Q8IXW5 612 aaPredicted RBP20.11■□□□□ 0.81
AP4E1-205ENST00000561393 MRPL50Q8N5N7 158 aaKnown RBP20.11■□□□□ 0.81
AP4E1-205ENST00000561393 IFIT2P09913 472 aaKnown RBP20.1■□□□□ 0.81
AP4E1-205ENST00000561393 ANKRD24Q8TF21 1146 aa20.1■□□□□ 0.81
AP4E1-205ENST00000561393 SPG7Q9UQ90 795 aa20.1■□□□□ 0.81
AP4E1-205ENST00000561393 GLI2P10070 1586 aa20.1■□□□□ 0.81
AP4E1-205ENST00000561393 G3BP1Q13283 466 aaKnown RBP eCLIP20.1■□□□□ 0.81
AP4E1-205ENST00000561393 TRMT2AQ8IZ69 625 aaKnown RBP20.09■□□□□ 0.81
AP4E1-205ENST00000561393 GBP4Q96PP9 640 aa20.09■□□□□ 0.81
AP4E1-205ENST00000561393 SMARCA5O60264 1052 aaPredicted RBP20.09■□□□□ 0.81
AP4E1-205ENST00000561393 ANXA1P04083 346 aa20.09■□□□□ 0.81
AP4E1-205ENST00000561393 HOXC9P31274 260 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms