RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL2-210ENST00000560834 LTN1O94822 1766 aa9.69□□□□□ -0.86
CTDSPL2-210ENST00000560834 USP31Q70CQ4 1352 aa9.69□□□□□ -0.86
CTDSPL2-210ENST00000560834 FBXO41Q8TF61 875 aa9.69□□□□□ -0.86
CTDSPL2-210ENST00000560834 NSD2O96028 1365 aa9.68□□□□□ -0.86
CTDSPL2-210ENST00000560834 NPC1L1Q9UHC9 1359 aa9.68□□□□□ -0.86
CTDSPL2-210ENST00000560834 USP19O94966 1318 aa9.68□□□□□ -0.86
CTDSPL2-210ENST00000560834 PLCB2Q00722 1185 aa9.68□□□□□ -0.86
CTDSPL2-210ENST00000560834 PSME1Q06323 249 aa9.68□□□□□ -0.86
CTDSPL2-210ENST00000560834 DDX10Q13206 875 aaKnown RBP9.68□□□□□ -0.86
CTDSPL2-210ENST00000560834 HSPA1LP34931 641 aa9.67□□□□□ -0.86
CTDSPL2-210ENST00000560834 NME9Q86XW9 330 aa9.67□□□□□ -0.86
CTDSPL2-210ENST00000560834 ZNF579Q8NAF0 562 aaKnown RBP9.67□□□□□ -0.86
CTDSPL2-210ENST00000560834 PEAK1Q9H792 1746 aa9.67□□□□□ -0.86
CTDSPL2-210ENST00000560834 PLCH1Q4KWH8 1693 aa9.67□□□□□ -0.86
CTDSPL2-210ENST00000560834 LRP6O75581 1613 aa9.67□□□□□ -0.86
CTDSPL2-210ENST00000560834 JCADQ9P266 1359 aa9.66□□□□□ -0.86
CTDSPL2-210ENST00000560834 CGNL1Q0VF96 1302 aa9.66□□□□□ -0.86
CTDSPL2-210ENST00000560834 MAMSTRQ6ZN01 415 aa9.66□□□□□ -0.86
CTDSPL2-210ENST00000560834 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.66□□□□□ -0.862e-6■■■■□ 22.1
CTDSPL2-210ENST00000560834 ZRANB1Q9UGI0 708 aa9.66□□□□□ -0.86
CTDSPL2-210ENST00000560834 LMO7Q8WWI1 1683 aa9.66□□□□□ -0.86
CTDSPL2-210ENST00000560834 COL18A1P39060 1754 aa9.65□□□□□ -0.86
CTDSPL2-210ENST00000560834 FYB1O15117 783 aa9.65□□□□□ -0.86
CTDSPL2-210ENST00000560834 PAK3O75914 559 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL2-210ENST00000560834 CDAN1Q8IWY9 1227 aa9.65□□□□□ -0.86
CTDSPL2-210ENST00000560834 SPOCK2Q92563 424 aa9.65□□□□□ -0.86
CTDSPL2-210ENST00000560834 FARP1Q9Y4F1 1045 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL2-210ENST00000560834 ABCC6O95255 1503 aa9.65□□□□□ -0.86
CTDSPL2-210ENST00000560834 NRAPQ86VF7 1730 aa9.65□□□□□ -0.87
CTDSPL2-210ENST00000560834 SMG6Q86US8 1419 aaKnown RBP9.65□□□□□ -0.87
CTDSPL2-210ENST00000560834 PARD3Q8TEW0 1356 aa9.64□□□□□ -0.87
CTDSPL2-210ENST00000560834 ABTB2Q8N961 1025 aa9.64□□□□□ -0.87
CTDSPL2-210ENST00000560834 LRRC59Q96AG4 307 aaKnown RBP9.64□□□□□ -0.87
CTDSPL2-210ENST00000560834 GGNBP2Q9H3C7 697 aa9.64□□□□□ -0.87
CTDSPL2-210ENST00000560834 KNSTRNQ9Y448 316 aa9.64□□□□□ -0.87
CTDSPL2-210ENST00000560834 MAP2P11137 1827 aaKnown RBP9.63□□□□□ -0.87
CTDSPL2-210ENST00000560834 COL14A1Q05707 1796 aaKnown RBP9.63□□□□□ -0.87
CTDSPL2-210ENST00000560834 NUTM2GQ5VZR2 741 aa9.63□□□□□ -0.87
CTDSPL2-210ENST00000560834 RGPD5Q99666 1765 aa9.63□□□□□ -0.87
CTDSPL2-210ENST00000560834 NWD2Q9ULI1 1742 aa9.62□□□□□ -0.87
CTDSPL2-210ENST00000560834 KLHL34Q8N239 644 aa9.62□□□□□ -0.87
CTDSPL2-210ENST00000560834 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.62□□□□□ -0.87
CTDSPL2-210ENST00000560834 AATKQ6ZMQ8 1374 aa9.62□□□□□ -0.87
CTDSPL2-210ENST00000560834 CDK12Q9NYV4 1490 aaPredicted RBP9.61□□□□□ -0.87
CTDSPL2-210ENST00000560834 NLRP6P59044 892 aa9.61□□□□□ -0.87
CTDSPL2-210ENST00000560834 CC2D1BQ5T0F9 858 aaKnown RBP9.61□□□□□ -0.87
CTDSPL2-210ENST00000560834 LMOD2Q6P5Q4 547 aa9.61□□□□□ -0.87
CTDSPL2-210ENST00000560834 NLRP13Q86W25 1043 aa9.61□□□□□ -0.87
CTDSPL2-210ENST00000560834 CPDO75976 1380 aa9.61□□□□□ -0.87
CTDSPL2-210ENST00000560834 FAM208AQ9UK61 1670 aaKnown RBP9.61□□□□□ -0.87
CTDSPL2-210ENST00000560834 CAMTA1Q9Y6Y1 1673 aa9.61□□□□□ -0.87
CTDSPL2-210ENST00000560834 COL3A1P02461 1466 aaPredicted RBP9.6□□□□□ -0.87
CTDSPL2-210ENST00000560834 SPATA31A6Q5VVP1 1343 aa9.6□□□□□ -0.87
CTDSPL2-210ENST00000560834 GALR2O43603 387 aaPredicted RBP9.6□□□□□ -0.87
CTDSPL2-210ENST00000560834 CABLES1Q8TDN4 633 aa9.6□□□□□ -0.87
CTDSPL2-210ENST00000560834 COG3Q96JB2 828 aa9.6□□□□□ -0.87
CTDSPL2-210ENST00000560834 RGPD1P0DJD0 1748 aa9.59□□□□□ -0.87
CTDSPL2-210ENST00000560834 WNK3Q9BYP7 1800 aa9.59□□□□□ -0.87
CTDSPL2-210ENST00000560834 RTL1A6NKG5 1358 aa9.59□□□□□ -0.87
CTDSPL2-210ENST00000560834 KIAA0232Q92628 1395 aa9.59□□□□□ -0.87
CTDSPL2-210ENST00000560834 GCP02774 474 aa9.58□□□□□ -0.88
CTDSPL2-210ENST00000560834 PLCD3Q8N3E9 789 aa9.58□□□□□ -0.88
CTDSPL2-210ENST00000560834 RGPD2P0DJD1 1756 aa9.58□□□□□ -0.88
CTDSPL2-210ENST00000560834 MAP3K19Q56UN5 1328 aa9.57□□□□□ -0.88
CTDSPL2-210ENST00000560834 SLIT2O94813 1529 aa9.57□□□□□ -0.88
CTDSPL2-210ENST00000560834 SOX12O15370 315 aa9.57□□□□□ -0.88
CTDSPL2-210ENST00000560834 PLEKHG5O94827 1062 aa9.57□□□□□ -0.88
CTDSPL2-210ENST00000560834 FBLN1P23142 703 aa9.57□□□□□ -0.88
CTDSPL2-210ENST00000560834 CNGB1Q14028 1251 aaPredicted RBP9.57□□□□□ -0.88
CTDSPL2-210ENST00000560834 MORC1Q86VD1 984 aa9.57□□□□□ -0.88
CTDSPL2-210ENST00000560834 KCNH5Q8NCM2 988 aa9.57□□□□□ -0.88
CTDSPL2-210ENST00000560834 PRKRIP1Q9H875 184 aaPredicted RBP9.57□□□□□ -0.88
CTDSPL2-210ENST00000560834 COL5A2P05997 1499 aaPredicted RBP9.57□□□□□ -0.88
CTDSPL2-210ENST00000560834 BLMP54132 1417 aaPredicted RBP9.56□□□□□ -0.88
CTDSPL2-210ENST00000560834 KIF24Q5T7B8 1368 aa9.56□□□□□ -0.88
CTDSPL2-210ENST00000560834 RRS1Q15050 365 aaKnown RBP9.56□□□□□ -0.88
CTDSPL2-210ENST00000560834 ILDR1Q86SU0 546 aaPredicted RBP9.56□□□□□ -0.88
CTDSPL2-210ENST00000560834 ARHGEF25Q86VW2 580 aa9.56□□□□□ -0.88
CTDSPL2-210ENST00000560834 FLT4P35916 1363 aa9.55□□□□□ -0.88
CTDSPL2-210ENST00000560834 TNNT2P45379 298 aaPredicted RBP9.55□□□□□ -0.88
CTDSPL2-210ENST00000560834 DIEXFQ68CQ4 756 aaKnown RBP9.55□□□□□ -0.88
CTDSPL2-210ENST00000560834 POLKQ9UBT6 870 aa9.55□□□□□ -0.88
CTDSPL2-210ENST00000560834 EMILIN1Q9Y6C2 1016 aa9.55□□□□□ -0.88
CTDSPL2-210ENST00000560834 MYBBP1AQ9BQG0 1328 aaKnown RBP9.55□□□□□ -0.88
CTDSPL2-210ENST00000560834 NUTM2BA6NNL0 878 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-210ENST00000560834 NUTM2EB1AL46 878 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-210ENST00000560834 PPP2R1AP30153 589 aa9.54□□□□□ -0.88
CTDSPL2-210ENST00000560834 HAP1P54257 671 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-210ENST00000560834 ZC3H6P61129 1189 aaKnown RBP9.54□□□□□ -0.88
CTDSPL2-210ENST00000560834 RALBP1Q15311 655 aa9.54□□□□□ -0.88
CTDSPL2-210ENST00000560834 NUTM2AQ8IVF1 878 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-210ENST00000560834 INSRP06213 1382 aa9.53□□□□□ -0.88
CTDSPL2-210ENST00000560834 ECM2O94769 699 aaPredicted RBP9.53□□□□□ -0.88
CTDSPL2-210ENST00000560834 ADAMTS2O95450 1211 aa9.53□□□□□ -0.88
CTDSPL2-210ENST00000560834 HOXC9P31274 260 aa9.53□□□□□ -0.88
CTDSPL2-210ENST00000560834 MMRN1Q13201 1228 aa9.53□□□□□ -0.88
CTDSPL2-210ENST00000560834 CHRNA2Q15822 529 aa9.53□□□□□ -0.88
CTDSPL2-210ENST00000560834 MIER1Q8N108 512 aa9.53□□□□□ -0.88
CTDSPL2-210ENST00000560834 PRDM11Q9NQV5 511 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms