RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 FAM182BQ5T319 152 aa12.09□□□□□ -0.47
TRPM1-212ENST00000560801 MPHOSPH8Q99549 860 aa12.09□□□□□ -0.47
TRPM1-212ENST00000560801 GNPATO15228 680 aa12.09□□□□□ -0.47
TRPM1-212ENST00000560801 PPP2R1AP30153 589 aa12.09□□□□□ -0.47
TRPM1-212ENST00000560801 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
TRPM1-212ENST00000560801 PREX2Q70Z35 1606 aa12.09□□□□□ -0.47
TRPM1-212ENST00000560801 TRAPPC3LQ5T215 181 aa12.09□□□□□ -0.47
TRPM1-212ENST00000560801 ADGRL2O95490 1459 aa12.09□□□□□ -0.47
TRPM1-212ENST00000560801 WDHD1O75717 1129 aaPredicted RBP12.09□□□□□ -0.47
TRPM1-212ENST00000560801 FCHSD2O94868 740 aa12.09□□□□□ -0.47
TRPM1-212ENST00000560801 IP6K1Q92551 441 aa12.08□□□□□ -0.48
TRPM1-212ENST00000560801 CCAR1Q8IX12 1150 aaKnown RBP12.08□□□□□ -0.48
TRPM1-212ENST00000560801 DNMT1P26358 1616 aaKnown RBP12.08□□□□□ -0.48
TRPM1-212ENST00000560801 PRIM1P49642 420 aaKnown RBP12.08□□□□□ -0.48
TRPM1-212ENST00000560801 NBPF6Q5VWK0 638 aa12.08□□□□□ -0.48
TRPM1-212ENST00000560801 NBPF5PQ86XG9 351 aaPredicted RBP12.08□□□□□ -0.48
TRPM1-212ENST00000560801 NBPF4Q96M43 638 aa12.08□□□□□ -0.48
TRPM1-212ENST00000560801 PCDH11XQ9BZA7 1347 aa12.08□□□□□ -0.48
TRPM1-212ENST00000560801 PCDH11YQ9BZA8 1340 aa12.08□□□□□ -0.48
TRPM1-212ENST00000560801 RBM5P52756 815 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRPM1-212ENST00000560801 LARP1Q6PKG0 1096 aaKnown RBP12.07□□□□□ -0.48
TRPM1-212ENST00000560801 FBLN1P23142 703 aa12.07□□□□□ -0.48
TRPM1-212ENST00000560801 BCL2L13Q9BXK5 485 aa12.07□□□□□ -0.48
TRPM1-212ENST00000560801 TOMM22Q9NS69 142 aa12.07□□□□□ -0.48
TRPM1-212ENST00000560801 RAD21O60216 631 aa12.07□□□□□ -0.48
TRPM1-212ENST00000560801 CNNM1Q9NRU3 951 aa12.07□□□□□ -0.48
TRPM1-212ENST00000560801 SETDB2Q96T68 719 aa12.07□□□□□ -0.48
TRPM1-212ENST00000560801 HSP90AB3PQ58FF7 597 aa12.06□□□□□ -0.48
TRPM1-212ENST00000560801 RIMS1Q86UR5 1692 aaKnown RBP12.06□□□□□ -0.48
TRPM1-212ENST00000560801 FLAD1Q8NFF5 587 aa12.06□□□□□ -0.48
TRPM1-212ENST00000560801 ARHGEF40Q8TER5 1519 aa12.06□□□□□ -0.48
TRPM1-212ENST00000560801 GJD4Q96KN9 370 aaPredicted RBP12.06□□□□□ -0.48
TRPM1-212ENST00000560801 PRKRIP1Q9H875 184 aaPredicted RBP12.06□□□□□ -0.48
TRPM1-212ENST00000560801 TULP1O00294 542 aaPredicted RBP12.05□□□□□ -0.48
TRPM1-212ENST00000560801 IRX6P78412 446 aaPredicted RBP12.05□□□□□ -0.48
TRPM1-212ENST00000560801 GRM1Q13255 1194 aa12.05□□□□□ -0.48
TRPM1-212ENST00000560801 G3BP1Q13283 466 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRPM1-212ENST00000560801 ABCC3O15438 1527 aa12.05□□□□□ -0.48
TRPM1-212ENST00000560801 PLEKHG3A1L390 1219 aa12.05□□□□□ -0.48
TRPM1-212ENST00000560801 TTLL12Q14166 644 aaPredicted RBP12.05□□□□□ -0.48
TRPM1-212ENST00000560801 TAF7Q15545 349 aaPredicted RBP12.05□□□□□ -0.48
TRPM1-212ENST00000560801 API5Q9BZZ5 524 aaKnown RBP12.05□□□□□ -0.48
TRPM1-212ENST00000560801 CAMSAP1Q5T5Y3 1602 aa12.05□□□□□ -0.48
TRPM1-212ENST00000560801 E9PSI1 815 aa12.05□□□□□ -0.48
TRPM1-212ENST00000560801 CCER2I3L3R5 266 aa12.05□□□□□ -0.48
TRPM1-212ENST00000560801 FYB1O15117 783 aa12.05□□□□□ -0.48
TRPM1-212ENST00000560801 ZNF428Q96B54 188 aa12.05□□□□□ -0.48
TRPM1-212ENST00000560801 KIAA0232Q92628 1395 aa12.04□□□□□ -0.48
TRPM1-212ENST00000560801 ARHGAP31Q2M1Z3 1444 aa12.04□□□□□ -0.48
TRPM1-212ENST00000560801 FKBP8Q14318 412 aa12.04□□□□□ -0.48
TRPM1-212ENST00000560801 FLT4P35916 1363 aa12.04□□□□□ -0.48
TRPM1-212ENST00000560801 MCM10Q7L590 875 aa12.03□□□□□ -0.48
TRPM1-212ENST00000560801 C6orf229H3BNL8 230 aa12.03□□□□□ -0.48
TRPM1-212ENST00000560801 IGHMBP2P38935 993 aaKnown RBP12.03□□□□□ -0.48
TRPM1-212ENST00000560801 TRMT112Q9UI30 125 aaKnown RBP12.03□□□□□ -0.48
TRPM1-212ENST00000560801 ROBO2Q9HCK4 1378 aa12.03□□□□□ -0.48
TRPM1-212ENST00000560801 KDM5CP41229 1560 aa12.03□□□□□ -0.48
TRPM1-212ENST00000560801 JDP2Q8WYK2 163 aa12.03□□□□□ -0.48
TRPM1-212ENST00000560801 NEUROD6Q96NK8 337 aa12.03□□□□□ -0.48
TRPM1-212ENST00000560801 PLEKHH1Q9ULM0 1364 aa12.03□□□□□ -0.48
TRPM1-212ENST00000560801 GPTP24298 496 aa12.03□□□□□ -0.48
TRPM1-212ENST00000560801 HOXC9P31274 260 aa12.03□□□□□ -0.48
TRPM1-212ENST00000560801 DCAF5Q96JK2 942 aa12.03□□□□□ -0.48
TRPM1-212ENST00000560801 GNL3LQ9NVN8 582 aaKnown RBP12.03□□□□□ -0.48
TRPM1-212ENST00000560801 ANKIB1Q9P2G1 1089 aa12.03□□□□□ -0.48
TRPM1-212ENST00000560801 PIK3C2GO75747 1445 aa12.02□□□□□ -0.48
TRPM1-212ENST00000560801 TMOD2Q9NZR1 351 aa12.02□□□□□ -0.48
TRPM1-212ENST00000560801 MAP3K19Q56UN5 1328 aa12.02□□□□□ -0.48
TRPM1-212ENST00000560801 SPATA31A3Q5VYP0 1347 aa12.02□□□□□ -0.49
TRPM1-212ENST00000560801 SETD1BQ9UPS6 1966 aaKnown RBP12.02□□□□□ -0.49
TRPM1-212ENST00000560801 KIAA1211Q6ZU35 1233 aa12.02□□□□□ -0.49
TRPM1-212ENST00000560801 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
TRPM1-212ENST00000560801 AGLP35573 1532 aa12.02□□□□□ -0.49
TRPM1-212ENST00000560801 EIF5BO60841 1220 aaKnown RBP12.01□□□□□ -0.49
TRPM1-212ENST00000560801 CCDC27Q2M243 656 aa12.01□□□□□ -0.49
TRPM1-212ENST00000560801 LRRFIP1Q32MZ4 808 aaKnown RBP12.01□□□□□ -0.49
TRPM1-212ENST00000560801 DDX46Q7L014 1031 aaKnown RBP12.01□□□□□ -0.49
TRPM1-212ENST00000560801 PPP1R42Q7Z4L9 355 aa12.01□□□□□ -0.49
TRPM1-212ENST00000560801 PUS7Q96PZ0 661 aaKnown RBP12.01□□□□□ -0.49
TRPM1-212ENST00000560801 CCDC87Q9NVE4 849 aa12.01□□□□□ -0.49
TRPM1-212ENST00000560801 MIS18AQ9NYP9 233 aa12.01□□□□□ -0.49
TRPM1-212ENST00000560801 NFE2L2Q16236 605 aa12.01□□□□□ -0.49
TRPM1-212ENST00000560801 SAMD1Q6SPF0 538 aaPredicted RBP12.01□□□□□ -0.49
TRPM1-212ENST00000560801 CFAP44Q96MT7 982 aa12.01□□□□□ -0.49
TRPM1-212ENST00000560801 SNRPA1P09661 255 aaKnown RBP12.01□□□□□ -0.49
TRPM1-212ENST00000560801 CCDC57Q2TAC2 916 aa12.01□□□□□ -0.49
TRPM1-212ENST00000560801 CCDC85AQ96PX6 553 aaPredicted RBP12.01□□□□□ -0.49
TRPM1-212ENST00000560801 ZBTB3Q9H5J0 574 aa12.01□□□□□ -0.49
TRPM1-212ENST00000560801 ADGRL3Q9HAR2 1447 aa12.01□□□□□ -0.49
TRPM1-212ENST00000560801 PSDA5PKW4 1024 aaPredicted RBP12.01□□□□□ -0.49
TRPM1-212ENST00000560801 ANKRD36BQ8N2N9 1353 aa12.01□□□□□ -0.49
TRPM1-212ENST00000560801 BCS1LQ9Y276 419 aa12□□□□□ -0.49
TRPM1-212ENST00000560801 UBTFL1P0CB47 393 aaPredicted RBP12□□□□□ -0.49
TRPM1-212ENST00000560801 TWISTNBQ3B726 338 aaPredicted RBP12□□□□□ -0.49
TRPM1-212ENST00000560801 MSL1Q68DK7 614 aa12□□□□□ -0.49
TRPM1-212ENST00000560801 TPTE2Q6XPS3 522 aa12□□□□□ -0.49
TRPM1-212ENST00000560801 SLC4A2P04920 1241 aa11.99□□□□□ -0.49
TRPM1-212ENST00000560801 NFATC2IPQ8NCF5 419 aa11.99□□□□□ -0.49
TRPM1-212ENST00000560801 ADAMTS8Q9UP79 889 aa11.99□□□□□ -0.49
TRPM1-212ENST00000560801 NSD2O96028 1365 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms