RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 SLC4A2P04920 1241 aa15.61■□□□□ 0.09
CSPG4P11-201ENST00000560634 USP8P40818 1118 aa15.61■□□□□ 0.09
CSPG4P11-201ENST00000560634 CEBPZQ03701 1054 aaKnown RBP15.61■□□□□ 0.09
CSPG4P11-201ENST00000560634 WWC2Q6AWC2 1192 aa15.61■□□□□ 0.09
CSPG4P11-201ENST00000560634 NOL7Q9UMY1 257 aaKnown RBP15.61■□□□□ 0.09
CSPG4P11-201ENST00000560634 KRT32Q14532 448 aa15.61■□□□□ 0.09
CSPG4P11-201ENST00000560634 BLOC1S2Q6QNY1 142 aa15.61■□□□□ 0.09
CSPG4P11-201ENST00000560634 PPP6R1Q9UPN7 881 aa15.61■□□□□ 0.09
CSPG4P11-201ENST00000560634 MTMR7Q9Y216 660 aa15.61■□□□□ 0.09
CSPG4P11-201ENST00000560634 ESPNB1AK53 854 aa15.61■□□□□ 0.09
CSPG4P11-201ENST00000560634 MCM4P33991 863 aa15.61■□□□□ 0.09
CSPG4P11-201ENST00000560634 TTC39AQ5SRH9 613 aa15.61■□□□□ 0.09
CSPG4P11-201ENST00000560634 HFM1A2PYH4 1435 aa15.6■□□□□ 0.09
CSPG4P11-201ENST00000560634 MVPQ14764 893 aaKnown RBP15.6■□□□□ 0.09
CSPG4P11-201ENST00000560634 TMEM132EQ6IEE7 984 aa15.6■□□□□ 0.09
CSPG4P11-201ENST00000560634 CTNNA3Q9UI47 895 aa15.6■□□□□ 0.09
CSPG4P11-201ENST00000560634 PDCL3Q9H2J4 239 aa15.6■□□□□ 0.09
CSPG4P11-201ENST00000560634 RRP9O43818 475 aaKnown RBP15.59■□□□□ 0.09
CSPG4P11-201ENST00000560634 KIF2AO00139 706 aaPredicted RBP15.59■□□□□ 0.09
CSPG4P11-201ENST00000560634 RBM10P98175 930 aaKnown RBP15.59■□□□□ 0.09
CSPG4P11-201ENST00000560634 CNNM1Q9NRU3 951 aa15.59■□□□□ 0.09
CSPG4P11-201ENST00000560634 CFAP70Q5T0N1 1121 aa15.59■□□□□ 0.09
CSPG4P11-201ENST00000560634 CHD1LQ86WJ1 897 aa15.59■□□□□ 0.09
CSPG4P11-201ENST00000560634 SMTNL1A8MU46 457 aa15.58■□□□□ 0.09
CSPG4P11-201ENST00000560634 SEPT7Q16181 437 aaKnown RBP15.58■□□□□ 0.09
CSPG4P11-201ENST00000560634 RPAP2Q8IXW5 612 aaPredicted RBP15.58■□□□□ 0.09
CSPG4P11-201ENST00000560634 ZNF692Q9BU19 519 aaPredicted RBP15.58■□□□□ 0.09
CSPG4P11-201ENST00000560634 NUP62CLQ9H1M0 184 aa15.58■□□□□ 0.09
CSPG4P11-201ENST00000560634 RUSC2Q8N2Y8 1516 aa15.58■□□□□ 0.09
CSPG4P11-201ENST00000560634 SKIDA1Q1XH10 827 aa15.58■□□□□ 0.09
CSPG4P11-201ENST00000560634 SPATA32Q96LK8 384 aa15.58■□□□□ 0.09
CSPG4P11-201ENST00000560634 C1orf115Q9H7X2 142 aa15.58■□□□□ 0.09
CSPG4P11-201ENST00000560634 BMP2KQ9NSY1 1161 aaPredicted RBP15.58■□□□□ 0.09
CSPG4P11-201ENST00000560634 ZNF644Q9H582 1327 aaPredicted RBP15.58■□□□□ 0.08
CSPG4P11-201ENST00000560634 ABTB2Q8N961 1025 aa15.58■□□□□ 0.08
CSPG4P11-201ENST00000560634 CCDC69A6NI79 296 aa15.57■□□□□ 0.08
CSPG4P11-201ENST00000560634 KDM4AO75164 1064 aa15.57■□□□□ 0.08
CSPG4P11-201ENST00000560634 BCAR3O75815 825 aa15.57■□□□□ 0.08
CSPG4P11-201ENST00000560634 IGF1RP08069 1367 aa15.57■□□□□ 0.08
CSPG4P11-201ENST00000560634 TMEM132AQ24JP5 1023 aa15.57■□□□□ 0.08
CSPG4P11-201ENST00000560634 SOGA3Q5TF21 947 aa15.57■□□□□ 0.08
CSPG4P11-201ENST00000560634 CCDC57Q2TAC2 916 aa15.57■□□□□ 0.08
CSPG4P11-201ENST00000560634 UPF3BQ9BZI7 483 aaKnown RBP15.56■□□□□ 0.08
CSPG4P11-201ENST00000560634 SMG6Q86US8 1419 aaKnown RBP15.56■□□□□ 0.08
CSPG4P11-201ENST00000560634 EZRP15311 586 aaKnown RBP15.56■□□□□ 0.08
CSPG4P11-201ENST00000560634 TATP17735 454 aaPredicted RBP15.56■□□□□ 0.08
CSPG4P11-201ENST00000560634 TSR2Q969E8 191 aaKnown RBP15.56■□□□□ 0.08
CSPG4P11-201ENST00000560634 GBP3Q9H0R5 595 aa15.56■□□□□ 0.08
CSPG4P11-201ENST00000560634 PDRG1Q9NUG6 133 aa15.55■□□□□ 0.08
CSPG4P11-201ENST00000560634 UQCRHLA0A096LP55 91 aa15.55■□□□□ 0.08
CSPG4P11-201ENST00000560634 UQCRHP07919 91 aa15.55■□□□□ 0.08
CSPG4P11-201ENST00000560634 PAF1Q8N7H5 531 aa15.55■□□□□ 0.08
CSPG4P11-201ENST00000560634 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
CSPG4P11-201ENST00000560634 STK3Q13188 491 aa15.55■□□□□ 0.08
CSPG4P11-201ENST00000560634 TAF3Q5VWG9 929 aa15.55■□□□□ 0.08
CSPG4P11-201ENST00000560634 NUTM2GQ5VZR2 741 aa15.55■□□□□ 0.08
CSPG4P11-201ENST00000560634 ZSCAN30Q86W11 494 aa15.55■□□□□ 0.08
CSPG4P11-201ENST00000560634 WASF1Q92558 559 aa15.55■□□□□ 0.08
CSPG4P11-201ENST00000560634 UBXN4Q92575 508 aa15.55■□□□□ 0.08
CSPG4P11-201ENST00000560634 TANGO6Q9C0B7 1094 aa15.55■□□□□ 0.08
CSPG4P11-201ENST00000560634 LRRC9Q6ZRR7 1453 aa15.54■□□□□ 0.08
CSPG4P11-201ENST00000560634 SULT6B1Q6IMI4 303 aa15.54■□□□□ 0.08
CSPG4P11-201ENST00000560634 HSP90AB3PQ58FF7 597 aa15.54■□□□□ 0.08
CSPG4P11-201ENST00000560634 MEX3CQ5U5Q3 659 aaKnown RBP15.54■□□□□ 0.08
CSPG4P11-201ENST00000560634 CYB5RLQ6IPT4 315 aa15.54■□□□□ 0.08
CSPG4P11-201ENST00000560634 GAPVD1Q14C86 1478 aa15.53■□□□□ 0.08
CSPG4P11-201ENST00000560634 FILIP1Q7Z7B0 1213 aa15.53■□□□□ 0.08
CSPG4P11-201ENST00000560634 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
CSPG4P11-201ENST00000560634 MAP3K11Q16584 847 aa15.53■□□□□ 0.08
CSPG4P11-201ENST00000560634 EPB41L2O43491 1005 aaKnown RBP15.53■□□□□ 0.08
CSPG4P11-201ENST00000560634 CEP126Q9P2H0 1117 aa15.52■□□□□ 0.08
CSPG4P11-201ENST00000560634 ARHGAP29Q52LW3 1261 aa15.52■□□□□ 0.08
CSPG4P11-201ENST00000560634 IL27Q8NEV9 243 aa15.52■□□□□ 0.08
CSPG4P11-201ENST00000560634 JAKMIP1Q96N16 626 aaKnown RBP15.52■□□□□ 0.08
CSPG4P11-201ENST00000560634 INCENPQ9NQS7 918 aa15.52■□□□□ 0.07
CSPG4P11-201ENST00000560634 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
CSPG4P11-201ENST00000560634 ENOX2Q16206 610 aaKnown RBP15.51■□□□□ 0.07
CSPG4P11-201ENST00000560634 FAM177A1Q8N128 213 aaPredicted RBP15.51■□□□□ 0.07
CSPG4P11-201ENST00000560634 TAF4BQ92750 862 aa15.51■□□□□ 0.07
CSPG4P11-201ENST00000560634 ZHX3Q9H4I2 956 aa15.51■□□□□ 0.07
CSPG4P11-201ENST00000560634 SRGAP3O43295 1099 aa15.51■□□□□ 0.07
CSPG4P11-201ENST00000560634 PLCD4Q9BRC7 762 aa15.51■□□□□ 0.07
CSPG4P11-201ENST00000560634 UBAC1Q9BSL1 405 aa15.51■□□□□ 0.07
CSPG4P11-201ENST00000560634 SLC12A5Q9H2X9 1139 aa15.51■□□□□ 0.07
CSPG4P11-201ENST00000560634 ANKRD62A6NC57 917 aa15.5■□□□□ 0.07
CSPG4P11-201ENST00000560634 AACSQ86V21 672 aa15.5■□□□□ 0.07
CSPG4P11-201ENST00000560634 LRRFIP2Q9Y608 721 aaKnown RBP15.5■□□□□ 0.07
CSPG4P11-201ENST00000560634 CEP131Q9UPN4 1083 aa15.5■□□□□ 0.07
CSPG4P11-201ENST00000560634 FAM177BA6PVY3 158 aa15.5■□□□□ 0.07
CSPG4P11-201ENST00000560634 NUP133Q8WUM0 1156 aa15.5■□□□□ 0.07
CSPG4P11-201ENST00000560634 MPHOSPH8Q99549 860 aa15.5■□□□□ 0.07
CSPG4P11-201ENST00000560634 CASKIN1Q8WXD9 1431 aa15.5■□□□□ 0.07
CSPG4P11-201ENST00000560634 FCHSD2O94868 740 aa15.5■□□□□ 0.07
CSPG4P11-201ENST00000560634 ZNF530Q6P9A1 599 aaPredicted RBP15.5■□□□□ 0.07
CSPG4P11-201ENST00000560634 PRAM1Q96QH2 718 aa15.5■□□□□ 0.07
CSPG4P11-201ENST00000560634 NCOA2Q15596 1464 aa15.49■□□□□ 0.07
CSPG4P11-201ENST00000560634 TAX1BP1Q86VP1 789 aa15.49■□□□□ 0.07
CSPG4P11-201ENST00000560634 AKNAQ7Z591 1439 aa15.49■□□□□ 0.07
CSPG4P11-201ENST00000560634 TMCO3Q6UWJ1 677 aa15.49■□□□□ 0.07
CSPG4P11-201ENST00000560634 ZSCAN12O43309 604 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms