RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 NBR1Q14596 966 aa13.12□□□□□ -0.31
RMDN3-209ENST00000560588 TNNQ9UQP3 1299 aa13.12□□□□□ -0.31
RMDN3-209ENST00000560588 EMILIN1Q9Y6C2 1016 aa13.12□□□□□ -0.31
RMDN3-209ENST00000560588 NALCNQ8IZF0 1738 aa13.12□□□□□ -0.31
RMDN3-209ENST00000560588 PTCH1Q13635 1447 aa13.12□□□□□ -0.31
RMDN3-209ENST00000560588 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
RMDN3-209ENST00000560588 ITPRIPQ8IWB1 547 aa13.12□□□□□ -0.31
RMDN3-209ENST00000560588 UPF2Q9HAU5 1272 aaKnown RBP13.12□□□□□ -0.31
RMDN3-209ENST00000560588 TTC21BQ7Z4L5 1316 aa13.11□□□□□ -0.31
RMDN3-209ENST00000560588 PRR36Q9H6K5 1346 aa13.11□□□□□ -0.31
RMDN3-209ENST00000560588 ZNF853P0CG23 659 aa13.11□□□□□ -0.31
RMDN3-209ENST00000560588 TBX22Q9Y458 520 aa13.11□□□□□ -0.31
RMDN3-209ENST00000560588 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
RMDN3-209ENST00000560588 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
RMDN3-209ENST00000560588 RIMS1Q86UR5 1692 aaKnown RBP13.1□□□□□ -0.31
RMDN3-209ENST00000560588 TTC21AQ8NDW8 1320 aa13.1□□□□□ -0.31
RMDN3-209ENST00000560588 DLG5Q8TDM6 1919 aa13.1□□□□□ -0.31
RMDN3-209ENST00000560588 PIK3R4Q99570 1358 aa13.1□□□□□ -0.31
RMDN3-209ENST00000560588 USP6P35125 1406 aa13.09□□□□□ -0.31
RMDN3-209ENST00000560588 BECN1Q14457 450 aa13.09□□□□□ -0.31
RMDN3-209ENST00000560588 PHACTR3Q96KR7 559 aa13.09□□□□□ -0.31
RMDN3-209ENST00000560588 USP31Q70CQ4 1352 aa13.09□□□□□ -0.31
RMDN3-209ENST00000560588 FER1L4A9Z1Z3 1794 aa13.09□□□□□ -0.31
RMDN3-209ENST00000560588 HMOX1P09601 288 aa13.09□□□□□ -0.31
RMDN3-209ENST00000560588 CFAP44Q96MT7 982 aa13.09□□□□□ -0.31
RMDN3-209ENST00000560588 ZBTB40Q9NUA8 1239 aa13.09□□□□□ -0.31
RMDN3-209ENST00000560588 LTKP29376 864 aa13.08□□□□□ -0.32
RMDN3-209ENST00000560588 DEKP35659 375 aaKnown RBP13.08□□□□□ -0.32
RMDN3-209ENST00000560588 SMC5Q8IY18 1101 aa13.08□□□□□ -0.32
RMDN3-209ENST00000560588 TMEM57Q8N5G2 664 aa13.08□□□□□ -0.32
RMDN3-209ENST00000560588 KIF24Q5T7B8 1368 aa13.08□□□□□ -0.32
RMDN3-209ENST00000560588 ACEP12821 1306 aa13.08□□□□□ -0.32
RMDN3-209ENST00000560588 VAMP4O75379 141 aa13.08□□□□□ -0.32
RMDN3-209ENST00000560588 THEMISQ8N1K5 641 aaPredicted RBP13.08□□□□□ -0.32
RMDN3-209ENST00000560588 MRPL50Q8N5N7 158 aaKnown RBP13.08□□□□□ -0.32
RMDN3-209ENST00000560588 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
RMDN3-209ENST00000560588 API5Q9BZZ5 524 aaKnown RBP13.07□□□□□ -0.32
RMDN3-209ENST00000560588 LAS1LQ9Y4W2 734 aaKnown RBP13.07□□□□□ -0.32
RMDN3-209ENST00000560588 SSH2Q76I76 1423 aa13.06□□□□□ -0.32
RMDN3-209ENST00000560588 PTPRUQ92729 1446 aa13.06□□□□□ -0.32
RMDN3-209ENST00000560588 RGPD1P0DJD0 1748 aa13.06□□□□□ -0.32
RMDN3-209ENST00000560588 FBLN1P23142 703 aa13.05□□□□□ -0.32
RMDN3-209ENST00000560588 RRS1Q15050 365 aaKnown RBP13.05□□□□□ -0.32
RMDN3-209ENST00000560588 ANKARQ7Z5J8 1434 aa13.05□□□□□ -0.32
RMDN3-209ENST00000560588 MBIPQ9NS73 344 aa13.05□□□□□ -0.32
RMDN3-209ENST00000560588 USP19O94966 1318 aa13.05□□□□□ -0.32
RMDN3-209ENST00000560588 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
RMDN3-209ENST00000560588 NCKAP5LQ9HCH0 1330 aa13.05□□□□□ -0.32
RMDN3-209ENST00000560588 XRN1Q8IZH2 1706 aaKnown RBP13.05□□□□□ -0.32
RMDN3-209ENST00000560588 EIF4A2Q14240 407 aaKnown RBP13.04□□□□□ -0.32
RMDN3-209ENST00000560588 AMOTL2Q9Y2J4 779 aa13.04□□□□□ -0.32
RMDN3-209ENST00000560588 FMN2Q9NZ56 1722 aa13.04□□□□□ -0.32
RMDN3-209ENST00000560588 TWISTNBQ3B726 338 aaPredicted RBP13.04□□□□□ -0.32
RMDN3-209ENST00000560588 GCC1Q96CN9 775 aa13.04□□□□□ -0.32
RMDN3-209ENST00000560588 ABCC4O15439 1325 aa13.04□□□□□ -0.32
RMDN3-209ENST00000560588 KIAA0232Q92628 1395 aa13.03□□□□□ -0.32
RMDN3-209ENST00000560588 TBC1D32Q96NH3 1257 aa13.03□□□□□ -0.32
RMDN3-209ENST00000560588 USP54Q70EL1 1684 aa13.02□□□□□ -0.32
RMDN3-209ENST00000560588 PEAK1Q9H792 1746 aa13.02□□□□□ -0.33
RMDN3-209ENST00000560588 EIF5BO60841 1220 aaKnown RBP13.02□□□□□ -0.33
RMDN3-209ENST00000560588 NUCB1Q02818 461 aa13.02□□□□□ -0.33
RMDN3-209ENST00000560588 SBNO1A3KN83 1393 aa13.02□□□□□ -0.33
RMDN3-209ENST00000560588 ZBTB7BO15156 539 aaPredicted RBP13.01□□□□□ -0.33
RMDN3-209ENST00000560588 SULT6B1Q6IMI4 303 aa13.01□□□□□ -0.33
RMDN3-209ENST00000560588 SLC26A8Q96RN1 970 aa13.01□□□□□ -0.33
RMDN3-209ENST00000560588 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
RMDN3-209ENST00000560588 FLT4P35916 1363 aa13.01□□□□□ -0.33
RMDN3-209ENST00000560588 CHL1O00533 1208 aa12.99□□□□□ -0.33
RMDN3-209ENST00000560588 SEC24BO95487 1268 aa12.99□□□□□ -0.33
RMDN3-209ENST00000560588 CEBPAP49715 358 aaPredicted RBP12.99□□□□□ -0.33
RMDN3-209ENST00000560588 TSPYL6Q8N831 410 aa12.99□□□□□ -0.33
RMDN3-209ENST00000560588 CHD1LQ86WJ1 897 aa12.98□□□□□ -0.33
RMDN3-209ENST00000560588 C8orf58Q8NAV2 365 aa12.98□□□□□ -0.33
RMDN3-209ENST00000560588 NGDNQ8NEJ9 315 aaKnown RBP12.98□□□□□ -0.33
RMDN3-209ENST00000560588 NFKBIBQ15653 356 aa12.98□□□□□ -0.33
RMDN3-209ENST00000560588 PTPRCP08575 1304 aa12.97□□□□□ -0.33
RMDN3-209ENST00000560588 HTATSF1O43719 755 aaKnown RBP12.97□□□□□ -0.33
RMDN3-209ENST00000560588 SLC4A3P48751 1232 aa12.97□□□□□ -0.33
RMDN3-209ENST00000560588 KDRP35968 1356 aa12.97□□□□□ -0.33
RMDN3-209ENST00000560588 CEP170BQ9Y4F5 1589 aaPredicted RBP12.97□□□□□ -0.33
RMDN3-209ENST00000560588 GAS2L2Q8NHY3 880 aa12.97□□□□□ -0.33
RMDN3-209ENST00000560588 PIK3C2AO00443 1686 aa12.96□□□□□ -0.33
RMDN3-209ENST00000560588 INTS3Q68E01 1043 aaKnown RBP12.96□□□□□ -0.33
RMDN3-209ENST00000560588 AEBP1Q8IUX7 1158 aa12.96□□□□□ -0.33
RMDN3-209ENST00000560588 MAP3K19Q56UN5 1328 aa12.96□□□□□ -0.34
RMDN3-209ENST00000560588 CRB1P82279 1406 aa12.96□□□□□ -0.34
RMDN3-209ENST00000560588 HSP90AB2PQ58FF8 381 aa12.96□□□□□ -0.34
RMDN3-209ENST00000560588 BMP2KLQ5H9B9 411 aa12.96□□□□□ -0.34
RMDN3-209ENST00000560588 RGPD8O14715 1765 aaPredicted RBP12.95□□□□□ -0.34
RMDN3-209ENST00000560588 SOS1Q07889 1333 aaPredicted RBP12.95□□□□□ -0.34
RMDN3-209ENST00000560588 FAM83GA6ND36 823 aa12.95□□□□□ -0.34
RMDN3-209ENST00000560588 C22orf23Q9BZE7 217 aa12.95□□□□□ -0.34
RMDN3-209ENST00000560588 RTF1Q92541 710 aaKnown RBP12.94□□□□□ -0.34
RMDN3-209ENST00000560588 IGSF1Q8N6C5 1336 aa12.94□□□□□ -0.34
RMDN3-209ENST00000560588 AMPHP49418 695 aa12.94□□□□□ -0.34
RMDN3-209ENST00000560588 RTL1A6NKG5 1358 aa12.94□□□□□ -0.34
RMDN3-209ENST00000560588 ELL2O00472 640 aaPredicted RBP12.93□□□□□ -0.34
RMDN3-209ENST00000560588 PLPPR3Q6T4P5 718 aa12.93□□□□□ -0.34
RMDN3-209ENST00000560588 BABAM1Q9NWV8 329 aa12.93□□□□□ -0.34
RMDN3-209ENST00000560588 ZNF142P52746 1687 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms