RNA–Protein interactions for RNA: ENST00000560563.1

ACTC1-203, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 2

Gene ACTC1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-203ENST00000560563 LRRC7Q96NW7 1537 aa11.54□□□□□ -0.56
ACTC1-203ENST00000560563 PPP1R37O75864 691 aa11.53□□□□□ -0.56
ACTC1-203ENST00000560563 SRPK2P78362 688 aaKnown RBP11.53□□□□□ -0.56
ACTC1-203ENST00000560563 C14orf37Q86TY3 774 aa11.53□□□□□ -0.56
ACTC1-203ENST00000560563 POLR3GLQ9BT43 218 aa11.53□□□□□ -0.56
ACTC1-203ENST00000560563 LTBP4Q8N2S1 1624 aa11.53□□□□□ -0.56
ACTC1-203ENST00000560563 HS6ST3Q8IZP7 471 aa11.52□□□□□ -0.57
ACTC1-203ENST00000560563 C19orf44Q9H6X5 657 aa11.52□□□□□ -0.57
ACTC1-203ENST00000560563 NALCNQ8IZF0 1738 aa11.52□□□□□ -0.57
ACTC1-203ENST00000560563 C2orf72A6NCS6 295 aa11.51□□□□□ -0.57
ACTC1-203ENST00000560563 ATAD2Q6PL18 1390 aa11.51□□□□□ -0.57
ACTC1-203ENST00000560563 NUDT16Q96DE0 195 aaKnown RBP11.5□□□□□ -0.57
ACTC1-203ENST00000560563 CDC42BPGQ6DT37 1551 aa11.5□□□□□ -0.57
ACTC1-203ENST00000560563 DDX10Q13206 875 aaKnown RBP11.49□□□□□ -0.57
ACTC1-203ENST00000560563 ARSIQ5FYB1 569 aa11.49□□□□□ -0.57
ACTC1-203ENST00000560563 PRR36Q9H6K5 1346 aa11.49□□□□□ -0.57
ACTC1-203ENST00000560563 MSH6P52701 1360 aa11.49□□□□□ -0.57
ACTC1-203ENST00000560563 DCCP43146 1447 aa11.49□□□□□ -0.57
ACTC1-203ENST00000560563 NUTM2FA1L443 756 aa11.48□□□□□ -0.57
ACTC1-203ENST00000560563 ATF3P18847 181 aa11.48□□□□□ -0.57
ACTC1-203ENST00000560563 SPNS2Q8IVW8 549 aa11.48□□□□□ -0.57
ACTC1-203ENST00000560563 ANKARQ7Z5J8 1434 aa11.48□□□□□ -0.57
ACTC1-203ENST00000560563 ATP7BP35670 1465 aa11.48□□□□□ -0.57
ACTC1-203ENST00000560563 XIRP1Q702N8 1843 aaKnown RBP11.47□□□□□ -0.57
ACTC1-203ENST00000560563 FMN2Q9NZ56 1722 aa11.47□□□□□ -0.57
ACTC1-203ENST00000560563 VARS2Q5ST30 1063 aaKnown RBP11.47□□□□□ -0.57
ACTC1-203ENST00000560563 GPR153Q6NV75 609 aa11.47□□□□□ -0.57
ACTC1-203ENST00000560563 CADPS2Q86UW7 1296 aa11.47□□□□□ -0.57
ACTC1-203ENST00000560563 TMC2Q8TDI7 906 aa11.47□□□□□ -0.57
ACTC1-203ENST00000560563 TMC1Q8TDI8 760 aa11.47□□□□□ -0.57
ACTC1-203ENST00000560563 SLC12A5Q9H2X9 1139 aa11.47□□□□□ -0.57
ACTC1-203ENST00000560563 ZSWIM6Q9HCJ5 1215 aa11.47□□□□□ -0.57
ACTC1-203ENST00000560563 NINLQ9Y2I6 1382 aa11.46□□□□□ -0.57
ACTC1-203ENST00000560563 KHSRPQ92945 711 aaKnown RBP eCLIP11.46□□□□□ -0.57
ACTC1-203ENST00000560563 CABP1Q9NZU7 370 aa11.46□□□□□ -0.57
ACTC1-203ENST00000560563 USP32Q8NFA0 1604 aa11.46□□□□□ -0.58
ACTC1-203ENST00000560563 PPIP5K1Q6PFW1 1433 aa11.45□□□□□ -0.58
ACTC1-203ENST00000560563 PLEKHG3A1L390 1219 aa11.45□□□□□ -0.58
ACTC1-203ENST00000560563 KRTAP3-3Q9BYR6 98 aa11.45□□□□□ -0.58
ACTC1-203ENST00000560563 KRTAP3-2Q9BYR7 98 aa11.45□□□□□ -0.58
ACTC1-203ENST00000560563 PANK3Q9H999 370 aa11.45□□□□□ -0.58
ACTC1-203ENST00000560563 MST1RQ04912 1400 aa11.44□□□□□ -0.58
ACTC1-203ENST00000560563 MYOM1P52179 1685 aa11.44□□□□□ -0.58
ACTC1-203ENST00000560563 KIF3CO14782 793 aa11.44□□□□□ -0.58
ACTC1-203ENST00000560563 C1orf167Q5SNV9 1468 aa11.44□□□□□ -0.58
ACTC1-203ENST00000560563 ANKRD36BQ8N2N9 1353 aa11.43□□□□□ -0.58
ACTC1-203ENST00000560563 MMRN1Q13201 1228 aa11.42□□□□□ -0.58
ACTC1-203ENST00000560563 ESCO1Q5FWF5 840 aa11.42□□□□□ -0.58
ACTC1-203ENST00000560563 PMFBP1Q8TBY8 1022 aa11.42□□□□□ -0.58
ACTC1-203ENST00000560563 TERF2IPQ9NYB0 399 aa11.42□□□□□ -0.58
ACTC1-203ENST00000560563 CD163L1Q9NR16 1453 aa11.42□□□□□ -0.58
ACTC1-203ENST00000560563 TOPAZ1Q8N9V7 1692 aa11.42□□□□□ -0.58
ACTC1-203ENST00000560563 A0A1W2PP64 1363 aa11.41□□□□□ -0.58
ACTC1-203ENST00000560563 ACEP12821 1306 aa11.41□□□□□ -0.58
ACTC1-203ENST00000560563 PER1O15534 1290 aaPredicted RBP11.41□□□□□ -0.58
ACTC1-203ENST00000560563 HDGFL2Q7Z4V5 671 aaPredicted RBP11.41□□□□□ -0.58
ACTC1-203ENST00000560563 ORAI2Q96SN7 254 aa11.41□□□□□ -0.58
ACTC1-203ENST00000560563 CARD14Q9BXL6 1004 aa11.41□□□□□ -0.58
ACTC1-203ENST00000560563 SLAIN2Q9P270 581 aa11.41□□□□□ -0.58
ACTC1-203ENST00000560563 CPSF1Q10570 1443 aaKnown RBP11.41□□□□□ -0.58
ACTC1-203ENST00000560563 POLR3AO14802 1390 aaPredicted RBP11.41□□□□□ -0.58
ACTC1-203ENST00000560563 ITSN1Q15811 1721 aa11.4□□□□□ -0.58
ACTC1-203ENST00000560563 IQSEC2Q5JU85 1478 aa11.4□□□□□ -0.58
ACTC1-203ENST00000560563 NGDNQ8NEJ9 315 aaKnown RBP11.4□□□□□ -0.58
ACTC1-203ENST00000560563 CERKQ8TCT0 537 aa11.4□□□□□ -0.58
ACTC1-203ENST00000560563 RGPD8O14715 1765 aaPredicted RBP11.4□□□□□ -0.58
ACTC1-203ENST00000560563 NKX1-1Q15270 411 aaPredicted RBP11.39□□□□□ -0.59
ACTC1-203ENST00000560563 DIEXFQ68CQ4 756 aaKnown RBP11.39□□□□□ -0.59
ACTC1-203ENST00000560563 BRINP3Q76B58 766 aa11.38□□□□□ -0.59
ACTC1-203ENST00000560563 KNSTRNQ9Y448 316 aa11.38□□□□□ -0.59
ACTC1-203ENST00000560563 KTN1Q86UP2 1357 aaKnown RBP11.38□□□□□ -0.59
ACTC1-203ENST00000560563 NSD3Q9BZ95 1437 aa11.37□□□□□ -0.59
ACTC1-203ENST00000560563 FOXO3O43524 673 aa11.37□□□□□ -0.59
ACTC1-203ENST00000560563 TOM1O60784 492 aa11.37□□□□□ -0.59
ACTC1-203ENST00000560563 USP6P35125 1406 aa11.36□□□□□ -0.59
ACTC1-203ENST00000560563 EDC4Q6P2E9 1401 aaKnown RBP11.36□□□□□ -0.59
ACTC1-203ENST00000560563 NUDT7P0C024 238 aa11.36□□□□□ -0.59
ACTC1-203ENST00000560563 AMER1Q5JTC6 1135 aaPredicted RBP11.36□□□□□ -0.59
ACTC1-203ENST00000560563 KIF1AQ12756 1690 aa11.36□□□□□ -0.59
ACTC1-203ENST00000560563 AKAP12Q02952 1782 aa11.36□□□□□ -0.59
ACTC1-203ENST00000560563 SSH2Q76I76 1423 aa11.35□□□□□ -0.59
ACTC1-203ENST00000560563 PSME1Q06323 249 aa11.35□□□□□ -0.59
ACTC1-203ENST00000560563 MON2Q7Z3U7 1717 aa11.35□□□□□ -0.59
ACTC1-203ENST00000560563 CGNL1Q0VF96 1302 aa11.35□□□□□ -0.59
ACTC1-203ENST00000560563 NPHP3Q7Z494 1330 aa11.35□□□□□ -0.59
ACTC1-203ENST00000560563 TTC21BQ7Z4L5 1316 aa11.35□□□□□ -0.59
ACTC1-203ENST00000560563 BRD4O60885 1362 aaPredicted RBP11.34□□□□□ -0.59
ACTC1-203ENST00000560563 NPC1L1Q9UHC9 1359 aa11.34□□□□□ -0.59
ACTC1-203ENST00000560563 UBAP1LF5GYI3 381 aa11.34□□□□□ -0.59
ACTC1-203ENST00000560563 KRT28Q7Z3Y7 464 aa11.34□□□□□ -0.59
ACTC1-203ENST00000560563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.34□□□□□ -0.59
ACTC1-203ENST00000560563 PCDHGA4Q9Y5G9 962 aa11.34□□□□□ -0.59
ACTC1-203ENST00000560563 FYB1O15117 783 aa11.33□□□□□ -0.6
ACTC1-203ENST00000560563 ZNF687Q8N1G0 1237 aa11.33□□□□□ -0.6
ACTC1-203ENST00000560563 DDX17Q92841 729 aaKnown RBP11.33□□□□□ -0.6
ACTC1-203ENST00000560563 TTC21AQ8NDW8 1320 aa11.33□□□□□ -0.6
ACTC1-203ENST00000560563 NSD2O96028 1365 aa11.32□□□□□ -0.6
ACTC1-203ENST00000560563 ANP32CO43423 234 aa11.32□□□□□ -0.6
ACTC1-203ENST00000560563 XPCQ01831 940 aaPredicted RBP11.32□□□□□ -0.6
ACTC1-203ENST00000560563 CC2D1BQ5T0F9 858 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms