RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 SAFBQ15424 915 aaKnown RBP eCLIP8.34□□□□□ -1.07
AP4E1-203ENST00000560508 MSH5O43196 834 aa8.34□□□□□ -1.07
AP4E1-203ENST00000560508 TTC39AQ5SRH9 613 aa8.34□□□□□ -1.07
AP4E1-203ENST00000560508 RBM33Q96EV2 1170 aaKnown RBP8.34□□□□□ -1.07
AP4E1-203ENST00000560508 CWC22Q9HCG8 908 aaKnown RBP8.34□□□□□ -1.07
AP4E1-203ENST00000560508 ADGRF5Q8IZF2 1346 aa8.34□□□□□ -1.07
AP4E1-203ENST00000560508 PRAG1Q86YV5 1406 aa8.34□□□□□ -1.07
AP4E1-203ENST00000560508 A2MP01023 1474 aa8.34□□□□□ -1.07
AP4E1-203ENST00000560508 BTBD11A6QL63 1104 aa8.33□□□□□ -1.08
AP4E1-203ENST00000560508 PES1O00541 588 aaKnown RBP8.33□□□□□ -1.08
AP4E1-203ENST00000560508 ZNF530Q6P9A1 599 aaPredicted RBP8.33□□□□□ -1.08
AP4E1-203ENST00000560508 ANKRD20A12PQ8NF67 263 aa8.33□□□□□ -1.08
AP4E1-203ENST00000560508 TBC1D2BQ9UPU7 963 aa8.33□□□□□ -1.08
AP4E1-203ENST00000560508 ASXL2Q76L83 1435 aa8.33□□□□□ -1.08
AP4E1-203ENST00000560508 ANKRD36BQ8N2N9 1353 aa8.33□□□□□ -1.08
AP4E1-203ENST00000560508 KCNH5Q8NCM2 988 aa8.33□□□□□ -1.08
AP4E1-203ENST00000560508 BRMS1Q9HCU9 246 aa8.33□□□□□ -1.08
AP4E1-203ENST00000560508 CCDC61Q9Y6R9 512 aa8.33□□□□□ -1.08
AP4E1-203ENST00000560508 CCDC73Q6ZRK6 1079 aa8.33□□□□□ -1.08
AP4E1-203ENST00000560508 DNAJC2Q99543 621 aaKnown RBP8.32□□□□□ -1.08
AP4E1-203ENST00000560508 MRE11P49959 708 aa8.32□□□□□ -1.08
AP4E1-203ENST00000560508 FBXW7Q969H0 707 aa8.32□□□□□ -1.08
AP4E1-203ENST00000560508 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.32□□□□□ -1.08
AP4E1-203ENST00000560508 FOSBP53539 338 aa8.32□□□□□ -1.08
AP4E1-203ENST00000560508 ABCC2Q92887 1545 aa8.32□□□□□ -1.08
AP4E1-203ENST00000560508 XBP1P17861 261 aa8.32□□□□□ -1.08
AP4E1-203ENST00000560508 CCDC158Q5M9N0 1113 aa8.32□□□□□ -1.08
AP4E1-203ENST00000560508 CCDC39Q9UFE4 941 aa8.32□□□□□ -1.08
AP4E1-203ENST00000560508 ANKRD1Q15327 319 aa8.31□□□□□ -1.08
AP4E1-203ENST00000560508 NAT10Q9H0A0 1025 aaKnown RBP8.31□□□□□ -1.08
AP4E1-203ENST00000560508 K7ELQ4 463 aaPredicted RBP8.31□□□□□ -1.08
AP4E1-203ENST00000560508 CCDC27Q2M243 656 aa8.31□□□□□ -1.08
AP4E1-203ENST00000560508 AEBP1Q8IUX7 1158 aa8.31□□□□□ -1.08
AP4E1-203ENST00000560508 C14orf93Q9H972 538 aaKnown RBP8.31□□□□□ -1.08
AP4E1-203ENST00000560508 TRAK2O60296 914 aa8.31□□□□□ -1.08
AP4E1-203ENST00000560508 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.31□□□□□ -1.08
AP4E1-203ENST00000560508 WAPLQ7Z5K2 1190 aa8.31□□□□□ -1.08
AP4E1-203ENST00000560508 TMEM57Q8N5G2 664 aa8.31□□□□□ -1.08
AP4E1-203ENST00000560508 ARID3AQ99856 593 aa8.31□□□□□ -1.08
AP4E1-203ENST00000560508 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.31□□□□□ -1.08
AP4E1-203ENST00000560508 MBD3O95983 291 aa8.31□□□□□ -1.08
AP4E1-203ENST00000560508 SLC26A8Q96RN1 970 aa8.31□□□□□ -1.08
AP4E1-203ENST00000560508 LRPPRCP42704 1394 aaKnown RBP8.31□□□□□ -1.08
AP4E1-203ENST00000560508 KDM5AP29375 1690 aaKnown RBP8.31□□□□□ -1.08
AP4E1-203ENST00000560508 A0A0U1RQG5 324 aaPredicted RBP8.3□□□□□ -1.08
AP4E1-203ENST00000560508 WASLO00401 505 aaPredicted RBP8.3□□□□□ -1.08
AP4E1-203ENST00000560508 SART3Q15020 963 aaKnown RBP8.3□□□□□ -1.08
AP4E1-203ENST00000560508 DNAJC5BQ9UF47 199 aa8.3□□□□□ -1.08
AP4E1-203ENST00000560508 CTDP1Q9Y5B0 961 aaPredicted RBP8.3□□□□□ -1.08
AP4E1-203ENST00000560508 PDCP20941 246 aa8.3□□□□□ -1.08
AP4E1-203ENST00000560508 NEK4P51957 841 aa8.3□□□□□ -1.08
AP4E1-203ENST00000560508 CCDC70Q6NSX1 233 aa8.3□□□□□ -1.08
AP4E1-203ENST00000560508 RPAP2Q8IXW5 612 aaPredicted RBP8.3□□□□□ -1.08
AP4E1-203ENST00000560508 RBM42Q9BTD8 480 aaKnown RBP8.3□□□□□ -1.08
AP4E1-203ENST00000560508 TOM1L2Q6ZVM7 507 aa8.3□□□□□ -1.08
AP4E1-203ENST00000560508 TCEAL9Q9UHQ7 104 aa8.3□□□□□ -1.08
AP4E1-203ENST00000560508 NASPP49321 788 aaPredicted RBP8.3□□□□□ -1.08
AP4E1-203ENST00000560508 RARSP54136 660 aaKnown RBP8.3□□□□□ -1.08
AP4E1-203ENST00000560508 OLFM4Q6UX06 510 aa8.3□□□□□ -1.08
AP4E1-203ENST00000560508 TSPY26PQ9H489 355 aa8.3□□□□□ -1.08
AP4E1-203ENST00000560508 STRN4Q9NRL3 753 aa8.3□□□□□ -1.08
AP4E1-203ENST00000560508 CEP170Q5SW79 1584 aa8.3□□□□□ -1.08
AP4E1-203ENST00000560508 ADGRL2O95490 1459 aa8.3□□□□□ -1.08
AP4E1-203ENST00000560508 ZNF396Q96N95 335 aaPredicted RBP8.3□□□□□ -1.08
AP4E1-203ENST00000560508 CEP89Q96ST8 783 aa8.3□□□□□ -1.08
AP4E1-203ENST00000560508 CNNM1Q9NRU3 951 aa8.3□□□□□ -1.08
AP4E1-203ENST00000560508 RAB11FIP3O75154 756 aa8.29□□□□□ -1.08
AP4E1-203ENST00000560508 SLC3A2P08195 630 aaKnown RBP8.29□□□□□ -1.08
AP4E1-203ENST00000560508 CYP46A1Q9Y6A2 500 aa8.29□□□□□ -1.08
AP4E1-203ENST00000560508 ABCC10Q5T3U5 1492 aa8.29□□□□□ -1.08
AP4E1-203ENST00000560508 DHX16O60231 1041 aaKnown RBP8.29□□□□□ -1.08
AP4E1-203ENST00000560508 PCMTD1Q96MG8 357 aaPredicted RBP8.29□□□□□ -1.08
AP4E1-203ENST00000560508 TTC21BQ7Z4L5 1316 aa8.29□□□□□ -1.08
AP4E1-203ENST00000560508 MYL6BP14649 208 aa8.29□□□□□ -1.08
AP4E1-203ENST00000560508 FYB1O15117 783 aa8.29□□□□□ -1.08
AP4E1-203ENST00000560508 RAD21O60216 631 aa8.29□□□□□ -1.08
AP4E1-203ENST00000560508 ZSCAN25Q6NSZ9 544 aa8.29□□□□□ -1.08
AP4E1-203ENST00000560508 DISP1Q96F81 1524 aa8.29□□□□□ -1.08
AP4E1-203ENST00000560508 GNL3LQ9NVN8 582 aaKnown RBP8.28□□□□□ -1.08
AP4E1-203ENST00000560508 PTPRCP08575 1304 aa8.28□□□□□ -1.08
AP4E1-203ENST00000560508 TARBP1Q13395 1621 aaKnown RBP8.28□□□□□ -1.08
AP4E1-203ENST00000560508 DUSP27Q5VZP5 1158 aa8.28□□□□□ -1.08
AP4E1-203ENST00000560508 MAP4K4O95819 1239 aaPredicted RBP8.28□□□□□ -1.08
AP4E1-203ENST00000560508 ARHGEF5Q12774 1597 aa8.28□□□□□ -1.08
AP4E1-203ENST00000560508 ABCC1P33527 1531 aa8.28□□□□□ -1.08
AP4E1-203ENST00000560508 IL16Q14005 1332 aa8.28□□□□□ -1.08
AP4E1-203ENST00000560508 HSP90AA2PQ14568 343 aaPredicted RBP8.27□□□□□ -1.08
AP4E1-203ENST00000560508 AMOTQ4VCS5 1084 aa8.27□□□□□ -1.08
AP4E1-203ENST00000560508 AACSQ86V21 672 aa8.27□□□□□ -1.08
AP4E1-203ENST00000560508 ZNF592Q92610 1267 aa8.27□□□□□ -1.08
AP4E1-203ENST00000560508 CAVIN1Q6NZI2 390 aaKnown RBP8.27□□□□□ -1.09
AP4E1-203ENST00000560508 ATP7AQ04656 1500 aa8.27□□□□□ -1.09
AP4E1-203ENST00000560508 WDR33Q9C0J8 1336 aaKnown RBP8.27□□□□□ -1.09
AP4E1-203ENST00000560508 CCDC173Q0VFZ6 552 aa8.27□□□□□ -1.09
AP4E1-203ENST00000560508 IDI1Q13907 227 aa8.27□□□□□ -1.09
AP4E1-203ENST00000560508 NME9Q86XW9 330 aa8.27□□□□□ -1.09
AP4E1-203ENST00000560508 PZPP20742 1482 aa8.27□□□□□ -1.09
AP4E1-203ENST00000560508 GPS2Q13227 327 aa8.27□□□□□ -1.09
AP4E1-203ENST00000560508 TNRQ92752 1358 aa8.27□□□□□ -1.09
AP4E1-203ENST00000560508 SIL1Q9H173 461 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms