RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CDK5RAP3Q96JB5 506 aa16.1■□□□□ 0.17
TRAF3-208ENST00000560371 TXLNAP40222 546 aa16.1■□□□□ 0.17
TRAF3-208ENST00000560371 FKBP4Q02790 459 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRAF3-208ENST00000560371 GCC1Q96CN9 775 aa16.1■□□□□ 0.17
TRAF3-208ENST00000560371 LRRCC1Q9C099 1032 aa16.1■□□□□ 0.17
TRAF3-208ENST00000560371 NAT10Q9H0A0 1025 aaKnown RBP16.1■□□□□ 0.17
TRAF3-208ENST00000560371 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
TRAF3-208ENST00000560371 GNAT3A8MTJ3 354 aa16.09■□□□□ 0.17
TRAF3-208ENST00000560371 ZNF652Q9Y2D9 606 aa16.09■□□□□ 0.17
TRAF3-208ENST00000560371 NEK4P51957 841 aa16.09■□□□□ 0.17
TRAF3-208ENST00000560371 WDR63Q8IWG1 891 aa16.09■□□□□ 0.17
TRAF3-208ENST00000560371 ZSCAN29Q8IWY8 852 aaPredicted RBP16.09■□□□□ 0.17
TRAF3-208ENST00000560371 PTCD1O75127 700 aaKnown RBP16.09■□□□□ 0.17
TRAF3-208ENST00000560371 ADAMTS2O95450 1211 aa16.09■□□□□ 0.17
TRAF3-208ENST00000560371 PDE3AQ14432 1141 aa16.09■□□□□ 0.17
TRAF3-208ENST00000560371 CEP126Q9P2H0 1117 aa16.09■□□□□ 0.17
TRAF3-208ENST00000560371 BICDL1Q6ZP65 573 aa16.08■□□□□ 0.16
TRAF3-208ENST00000560371 ADGRL1O94910 1474 aa16.08■□□□□ 0.16
TRAF3-208ENST00000560371 STK11IPQ8N1F8 1099 aa16.08■□□□□ 0.16
TRAF3-208ENST00000560371 CT47B1P0C2W7 299 aaPredicted RBP16.08■□□□□ 0.16
TRAF3-208ENST00000560371 MCM2P49736 904 aa16.08■□□□□ 0.16
TRAF3-208ENST00000560371 ZFYVE27Q5T4F4 411 aa16.08■□□□□ 0.16
TRAF3-208ENST00000560371 ZSCAN25Q6NSZ9 544 aa16.08■□□□□ 0.16
TRAF3-208ENST00000560371 GPS2Q13227 327 aa16.07■□□□□ 0.16
TRAF3-208ENST00000560371 FCHSD2O94868 740 aa16.07■□□□□ 0.16
TRAF3-208ENST00000560371 ZPR1O75312 459 aa16.07■□□□□ 0.16
TRAF3-208ENST00000560371 FOXO3O43524 673 aa16.07■□□□□ 0.16
TRAF3-208ENST00000560371 SRGAP3O43295 1099 aa16.06■□□□□ 0.16
TRAF3-208ENST00000560371 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
TRAF3-208ENST00000560371 ATF7IPQ6VMQ6 1270 aa16.06■□□□□ 0.16
TRAF3-208ENST00000560371 NGLY1Q96IV0 654 aa16.06■□□□□ 0.16
TRAF3-208ENST00000560371 IGHMBP2P38935 993 aaKnown RBP16.06■□□□□ 0.16
TRAF3-208ENST00000560371 TMOD3Q9NYL9 352 aa16.06■□□□□ 0.16
TRAF3-208ENST00000560371 GSE1Q14687 1217 aa16.06■□□□□ 0.16
TRAF3-208ENST00000560371 PTPN23Q9H3S7 1636 aa16.05■□□□□ 0.16
TRAF3-208ENST00000560371 TRIM22Q8IYM9 498 aa16.05■□□□□ 0.16
TRAF3-208ENST00000560371 KINO60870 393 aaKnown RBP16.05■□□□□ 0.16
TRAF3-208ENST00000560371 NSD3Q9BZ95 1437 aa16.05■□□□□ 0.16
TRAF3-208ENST00000560371 LRP2BPQ9P2M1 347 aa16.05■□□□□ 0.16
TRAF3-208ENST00000560371 KRT18P05783 430 aaKnown RBP16.04■□□□□ 0.16
TRAF3-208ENST00000560371 ABCA10Q8WWZ4 1543 aa16.03■□□□□ 0.16
TRAF3-208ENST00000560371 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
TRAF3-208ENST00000560371 BCAR3O75815 825 aa16.03■□□□□ 0.16
TRAF3-208ENST00000560371 AACSQ86V21 672 aa16.03■□□□□ 0.16
TRAF3-208ENST00000560371 TDO2P48775 406 aa16.03■□□□□ 0.16
TRAF3-208ENST00000560371 CCDC85AQ96PX6 553 aaPredicted RBP16.03■□□□□ 0.16
TRAF3-208ENST00000560371 AMOTL2Q9Y2J4 779 aa16.03■□□□□ 0.16
TRAF3-208ENST00000560371 CCDC69A6NI79 296 aa16.03■□□□□ 0.16
TRAF3-208ENST00000560371 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.03■□□□□ 0.167e-7■■■■■ 73
TRAF3-208ENST00000560371 ANKRD1Q15327 319 aa16.02■□□□□ 0.16
TRAF3-208ENST00000560371 NFE2L2Q16236 605 aa16.02■□□□□ 0.16
TRAF3-208ENST00000560371 PLB1Q6P1J6 1458 aa16.02■□□□□ 0.16
TRAF3-208ENST00000560371 MPRIPQ6WCQ1 1025 aa16.02■□□□□ 0.16
TRAF3-208ENST00000560371 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.16
TRAF3-208ENST00000560371 PCF11O94913 1555 aaKnown RBP16.02■□□□□ 0.15
TRAF3-208ENST00000560371 CAMSAP2Q08AD1 1489 aa16.02■□□□□ 0.15
TRAF3-208ENST00000560371 PDZRN3Q9UPQ7 1066 aa16.02■□□□□ 0.15
TRAF3-208ENST00000560371 CYP46A1Q9Y6A2 500 aa16.02■□□□□ 0.15
TRAF3-208ENST00000560371 ABCF2Q9UG63 623 aa16.01■□□□□ 0.15
TRAF3-208ENST00000560371 FAM135AQ9P2D6 1515 aa16.01■□□□□ 0.15
TRAF3-208ENST00000560371 TMOD2Q9NZR1 351 aa16.01■□□□□ 0.15
TRAF3-208ENST00000560371 TMPOP42166 694 aaKnown RBP16.01■□□□□ 0.15
TRAF3-208ENST00000560371 AMOTQ4VCS5 1084 aa16.01■□□□□ 0.15
TRAF3-208ENST00000560371 CEBPAP49715 358 aaPredicted RBP16.01■□□□□ 0.15
TRAF3-208ENST00000560371 JMYQ8N9B5 988 aa16■□□□□ 0.15
TRAF3-208ENST00000560371 RAI14Q9P0K7 980 aa16■□□□□ 0.15
TRAF3-208ENST00000560371 ZNF396Q96N95 335 aaPredicted RBP16■□□□□ 0.15
TRAF3-208ENST00000560371 GRIN2AQ12879 1464 aa16■□□□□ 0.15
TRAF3-208ENST00000560371 MAP4K4O95819 1239 aaPredicted RBP16■□□□□ 0.15
TRAF3-208ENST00000560371 PDILTQ8N807 584 aa16■□□□□ 0.15
TRAF3-208ENST00000560371 NUP133Q8WUM0 1156 aa16■□□□□ 0.15
TRAF3-208ENST00000560371 SOGA3Q5TF21 947 aa16■□□□□ 0.15
TRAF3-208ENST00000560371 SETQ01105 290 aaPredicted RBP15.99■□□□□ 0.15
TRAF3-208ENST00000560371 PAF1Q8N7H5 531 aa15.99■□□□□ 0.15
TRAF3-208ENST00000560371 CCDC173Q0VFZ6 552 aa15.99■□□□□ 0.15
TRAF3-208ENST00000560371 RABEP1Q15276 862 aa15.99■□□□□ 0.15
TRAF3-208ENST00000560371 PHF8Q9UPP1 1060 aa15.99■□□□□ 0.15
TRAF3-208ENST00000560371 MIS18AQ9NYP9 233 aa15.99■□□□□ 0.15
TRAF3-208ENST00000560371 CEBPZQ03701 1054 aaKnown RBP15.99■□□□□ 0.15
TRAF3-208ENST00000560371 METTL24Q5JXM2 366 aa15.99■□□□□ 0.15
TRAF3-208ENST00000560371 MAGEC2Q9UBF1 373 aaPredicted RBP15.99■□□□□ 0.15
TRAF3-208ENST00000560371 LRPPRCP42704 1394 aaKnown RBP15.99■□□□□ 0.15
TRAF3-208ENST00000560371 UBAC1Q9BSL1 405 aa15.99■□□□□ 0.15
TRAF3-208ENST00000560371 IDH1O75874 414 aaKnown RBP15.98■□□□□ 0.15
TRAF3-208ENST00000560371 STK38Q15208 465 aa15.98■□□□□ 0.15
TRAF3-208ENST00000560371 SPINK5Q9NQ38 1064 aaPredicted RBP15.98■□□□□ 0.15
TRAF3-208ENST00000560371 CTNNA3Q9UI47 895 aa15.98■□□□□ 0.15
TRAF3-208ENST00000560371 IDI1Q13907 227 aa15.98■□□□□ 0.15
TRAF3-208ENST00000560371 MVPQ14764 893 aaKnown RBP15.97■□□□□ 0.15
TRAF3-208ENST00000560371 FILIP1LQ4L180 1135 aa15.97■□□□□ 0.15
TRAF3-208ENST00000560371 LARP1Q6PKG0 1096 aaKnown RBP15.97■□□□□ 0.15
TRAF3-208ENST00000560371 ANKIB1Q9P2G1 1089 aa15.97■□□□□ 0.15
TRAF3-208ENST00000560371 STK3Q13188 491 aa15.97■□□□□ 0.15
TRAF3-208ENST00000560371 SYCP1Q15431 976 aa15.97■□□□□ 0.15
TRAF3-208ENST00000560371 FBXO31Q5XUX0 539 aaPredicted RBP15.97■□□□□ 0.15
TRAF3-208ENST00000560371 IFT57Q9NWB7 429 aa15.97■□□□□ 0.15
TRAF3-208ENST00000560371 TAF7Q15545 349 aaPredicted RBP15.97■□□□□ 0.15
TRAF3-208ENST00000560371 HSP90AB2PQ58FF8 381 aa15.97■□□□□ 0.15
TRAF3-208ENST00000560371 DUSP27Q5VZP5 1158 aa15.97■□□□□ 0.15
TRAF3-208ENST00000560371 PPP6R1Q9UPN7 881 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms