RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 U2AF1L5P0DN76 240 aaPredicted RBP8.19□□□□□ -1.1
AC087516.2-201ENST00000558963 U2AF1Q01081 240 aaKnown RBP eCLIP8.19□□□□□ -1.1
AC087516.2-201ENST00000558963 IFT57Q9NWB7 429 aa8.19□□□□□ -1.1
AC087516.2-201ENST00000558963 PLEKHG1Q9ULL1 1385 aa8.19□□□□□ -1.1
AC087516.2-201ENST00000558963 PEAK1Q9H792 1746 aa8.19□□□□□ -1.1
AC087516.2-201ENST00000558963 FRAT2O75474 233 aaPredicted RBP8.19□□□□□ -1.1
AC087516.2-201ENST00000558963 CDK19Q9BWU1 502 aa8.19□□□□□ -1.1
AC087516.2-201ENST00000558963 TRIM27P14373 513 aa8.19□□□□□ -1.1
AC087516.2-201ENST00000558963 CANXP27824 592 aaKnown RBP8.19□□□□□ -1.1
AC087516.2-201ENST00000558963 SLC4A3P48751 1232 aa8.19□□□□□ -1.1
AC087516.2-201ENST00000558963 LMOD3Q0VAK6 560 aa8.19□□□□□ -1.1
AC087516.2-201ENST00000558963 ABCC4O15439 1325 aa8.18□□□□□ -1.1
AC087516.2-201ENST00000558963 ADAMTS13Q76LX8 1427 aa8.18□□□□□ -1.1
AC087516.2-201ENST00000558963 NFE2L2Q16236 605 aa8.18□□□□□ -1.1
AC087516.2-201ENST00000558963 PDZRN3Q9UPQ7 1066 aa8.18□□□□□ -1.1
AC087516.2-201ENST00000558963 KIAA0232Q92628 1395 aa8.18□□□□□ -1.1
AC087516.2-201ENST00000558963 SRPK2P78362 688 aaKnown RBP8.18□□□□□ -1.1
AC087516.2-201ENST00000558963 CFAP44Q96MT7 982 aa8.18□□□□□ -1.1
AC087516.2-201ENST00000558963 CERKQ8TCT0 537 aa8.17□□□□□ -1.1
AC087516.2-201ENST00000558963 UPF2Q9HAU5 1272 aaKnown RBP8.17□□□□□ -1.1
AC087516.2-201ENST00000558963 POLKQ9UBT6 870 aa8.17□□□□□ -1.1
AC087516.2-201ENST00000558963 PTPRUQ92729 1446 aa8.17□□□□□ -1.1
AC087516.2-201ENST00000558963 WASLO00401 505 aaPredicted RBP8.17□□□□□ -1.1
AC087516.2-201ENST00000558963 IL13P35225 146 aa8.17□□□□□ -1.1
AC087516.2-201ENST00000558963 RBM25P49756 843 aaKnown RBP8.17□□□□□ -1.1
AC087516.2-201ENST00000558963 RGS3P49796 1198 aa8.17□□□□□ -1.1
AC087516.2-201ENST00000558963 HDGFP51858 240 aaKnown RBP8.17□□□□□ -1.1
AC087516.2-201ENST00000558963 SSH1Q8WYL5 1049 aa8.17□□□□□ -1.1
AC087516.2-201ENST00000558963 ZNF692Q9BU19 519 aaPredicted RBP8.17□□□□□ -1.1
AC087516.2-201ENST00000558963 FAM208AQ9UK61 1670 aaKnown RBP8.17□□□□□ -1.1
AC087516.2-201ENST00000558963 TMEM2Q9UHN6 1383 aa8.16□□□□□ -1.1
AC087516.2-201ENST00000558963 HAP1P54257 671 aaPredicted RBP8.16□□□□□ -1.1
AC087516.2-201ENST00000558963 NUCB1Q02818 461 aa8.16□□□□□ -1.1
AC087516.2-201ENST00000558963 ARHGEF10O15013 1369 aa8.16□□□□□ -1.1
AC087516.2-201ENST00000558963 EXOSC9Q06265 439 aaKnown RBP8.16□□□□□ -1.1
AC087516.2-201ENST00000558963 L1TD1Q5T7N2 865 aaKnown RBP8.16□□□□□ -1.1
AC087516.2-201ENST00000558963 SNX21Q969T3 373 aa8.16□□□□□ -1.1
AC087516.2-201ENST00000558963 GCC1Q96CN9 775 aa8.16□□□□□ -1.1
AC087516.2-201ENST00000558963 POGKQ9P215 609 aa8.16□□□□□ -1.1
AC087516.2-201ENST00000558963 RTL1A6NKG5 1358 aa8.16□□□□□ -1.1
AC087516.2-201ENST00000558963 GNAI1P63096 354 aa8.16□□□□□ -1.1
AC087516.2-201ENST00000558963 ANKARQ7Z5J8 1434 aa8.15□□□□□ -1.1
AC087516.2-201ENST00000558963 TNRQ92752 1358 aa8.15□□□□□ -1.1
AC087516.2-201ENST00000558963 SOS1Q07889 1333 aaPredicted RBP8.15□□□□□ -1.1
AC087516.2-201ENST00000558963 FTSJ3Q8IY81 847 aaKnown RBP8.15□□□□□ -1.1
AC087516.2-201ENST00000558963 RTN4Q9NQC3 1192 aaKnown RBP8.15□□□□□ -1.1
AC087516.2-201ENST00000558963 SMC4Q9NTJ3 1288 aa8.15□□□□□ -1.1
AC087516.2-201ENST00000558963 METP08581 1390 aa8.15□□□□□ -1.1
AC087516.2-201ENST00000558963 DDIT3P35638 169 aa8.15□□□□□ -1.11
AC087516.2-201ENST00000558963 BMP2KLQ5H9B9 411 aa8.15□□□□□ -1.11
AC087516.2-201ENST00000558963 GGNBP2Q9H3C7 697 aa8.15□□□□□ -1.11
AC087516.2-201ENST00000558963 RRP7AQ9Y3A4 280 aaKnown RBP8.15□□□□□ -1.11
AC087516.2-201ENST00000558963 PLEKHG3A1L390 1219 aa8.14□□□□□ -1.11
AC087516.2-201ENST00000558963 RIPK4P57078 832 aa8.14□□□□□ -1.11
AC087516.2-201ENST00000558963 USP6P35125 1406 aa8.14□□□□□ -1.11
AC087516.2-201ENST00000558963 MINK1Q8N4C8 1332 aaPredicted RBP8.14□□□□□ -1.11
AC087516.2-201ENST00000558963 PIK3C2AO00443 1686 aa8.14□□□□□ -1.11
AC087516.2-201ENST00000558963 MRPL50Q8N5N7 158 aaKnown RBP8.14□□□□□ -1.11
AC087516.2-201ENST00000558963 CABP1Q9NZU7 370 aa8.14□□□□□ -1.11
AC087516.2-201ENST00000558963 ISY1Q9ULR0 285 aaKnown RBP8.14□□□□□ -1.11
AC087516.2-201ENST00000558963 RGS12O14924 1447 aa8.14□□□□□ -1.11
AC087516.2-201ENST00000558963 KDRP35968 1356 aa8.14□□□□□ -1.11
AC087516.2-201ENST00000558963 PXDNLA1KZ92 1463 aa8.14□□□□□ -1.11
AC087516.2-201ENST00000558963 TTC21BQ7Z4L5 1316 aa8.13□□□□□ -1.11
AC087516.2-201ENST00000558963 MED1Q15648 1581 aaPredicted RBP8.13□□□□□ -1.11
AC087516.2-201ENST00000558963 VAMP4O75379 141 aa8.13□□□□□ -1.11
AC087516.2-201ENST00000558963 SEC24BO95487 1268 aa8.13□□□□□ -1.11
AC087516.2-201ENST00000558963 CIZ1Q9ULV3 898 aaPredicted RBP8.13□□□□□ -1.11
AC087516.2-201ENST00000558963 CCDC61Q9Y6R9 512 aa8.13□□□□□ -1.11
AC087516.2-201ENST00000558963 CAMTA1Q9Y6Y1 1673 aa8.13□□□□□ -1.11
AC087516.2-201ENST00000558963 FSD2A1L4K1 749 aa8.13□□□□□ -1.11
AC087516.2-201ENST00000558963 ZBTB7BO15156 539 aaPredicted RBP8.13□□□□□ -1.11
AC087516.2-201ENST00000558963 FBXO31Q5XUX0 539 aaPredicted RBP8.13□□□□□ -1.11
AC087516.2-201ENST00000558963 TTC21AQ8NDW8 1320 aa8.12□□□□□ -1.11
AC087516.2-201ENST00000558963 NOB1Q9ULX3 412 aaKnown RBP8.12□□□□□ -1.11
AC087516.2-201ENST00000558963 ATP10DQ9P241 1426 aa8.12□□□□□ -1.11
AC087516.2-201ENST00000558963 TMEM57Q8N5G2 664 aa8.12□□□□□ -1.11
AC087516.2-201ENST00000558963 API5Q9BZZ5 524 aaKnown RBP8.12□□□□□ -1.11
AC087516.2-201ENST00000558963 TNNQ9UQP3 1299 aa8.12□□□□□ -1.11
AC087516.2-201ENST00000558963 NWD1Q149M9 1564 aa8.11□□□□□ -1.11
AC087516.2-201ENST00000558963 PTMSP20962 102 aa8.11□□□□□ -1.11
AC087516.2-201ENST00000558963 TNNT2P45379 298 aaPredicted RBP8.11□□□□□ -1.11
AC087516.2-201ENST00000558963 CLEC17AQ6ZS10 378 aa8.11□□□□□ -1.11
AC087516.2-201ENST00000558963 UBE2Q2Q8WVN8 375 aa8.11□□□□□ -1.11
AC087516.2-201ENST00000558963 TSR2Q969E8 191 aaKnown RBP8.11□□□□□ -1.11
AC087516.2-201ENST00000558963 PRKAR2BP31323 418 aa8.11□□□□□ -1.11
AC087516.2-201ENST00000558963 INTS3Q68E01 1043 aaKnown RBP8.11□□□□□ -1.11
AC087516.2-201ENST00000558963 TBC1D2Q9BYX2 928 aa8.11□□□□□ -1.11
AC087516.2-201ENST00000558963 CRB1P82279 1406 aa8.11□□□□□ -1.11
AC087516.2-201ENST00000558963 PTPRCP08575 1304 aa8.11□□□□□ -1.11
AC087516.2-201ENST00000558963 CRYBG1Q9Y4K1 1723 aa8.11□□□□□ -1.11
AC087516.2-201ENST00000558963 U2SURPO15042 1029 aaKnown RBP8.11□□□□□ -1.11
AC087516.2-201ENST00000558963 SOCS7O14512 581 aa8.1□□□□□ -1.11
AC087516.2-201ENST00000558963 CHD1LQ86WJ1 897 aa8.1□□□□□ -1.11
AC087516.2-201ENST00000558963 ROBO2Q9HCK4 1378 aa8.1□□□□□ -1.11
AC087516.2-201ENST00000558963 NEUROD2Q15784 382 aa8.1□□□□□ -1.11
AC087516.2-201ENST00000558963 NUDT16Q96DE0 195 aaKnown RBP8.1□□□□□ -1.11
AC087516.2-201ENST00000558963 C22orf23Q9BZE7 217 aa8.1□□□□□ -1.11
AC087516.2-201ENST00000558963 BABAM1Q9NWV8 329 aa8.1□□□□□ -1.11
AC087516.2-201ENST00000558963 STK26Q9P289 416 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms