RNA–Protein interactions for RNA: ENST00000558903.1

CHRNA3-203, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-203ENST00000558903 USP54Q70EL1 1684 aa8.08□□□□□ -1.12
CHRNA3-203ENST00000558903 RGPD5Q99666 1765 aa8.08□□□□□ -1.12
CHRNA3-203ENST00000558903 PRKAR2AP13861 404 aaKnown RBP8.08□□□□□ -1.12
CHRNA3-203ENST00000558903 ZEB1P37275 1124 aaPredicted RBP8.08□□□□□ -1.12
CHRNA3-203ENST00000558903 NUTM2GQ5VZR2 741 aa8.08□□□□□ -1.12
CHRNA3-203ENST00000558903 NGLY1Q96IV0 654 aa8.08□□□□□ -1.12
CHRNA3-203ENST00000558903 TESK2Q96S53 571 aa8.08□□□□□ -1.12
CHRNA3-203ENST00000558903 NRAPQ86VF7 1730 aa8.07□□□□□ -1.12
CHRNA3-203ENST00000558903 EDC4Q6P2E9 1401 aaKnown RBP8.07□□□□□ -1.12
CHRNA3-203ENST00000558903 ZNF772Q68DY9 489 aaPredicted RBP8.07□□□□□ -1.12
CHRNA3-203ENST00000558903 CHRDL2Q6WN34 429 aa8.07□□□□□ -1.12
CHRNA3-203ENST00000558903 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.07□□□□□ -1.12
CHRNA3-203ENST00000558903 SGIP1Q9BQI5 828 aa8.07□□□□□ -1.12
CHRNA3-203ENST00000558903 A0A1W2PP64 1363 aa8.07□□□□□ -1.12
CHRNA3-203ENST00000558903 ANKRD36BQ8N2N9 1353 aa8.07□□□□□ -1.12
CHRNA3-203ENST00000558903 AFF2P51816 1311 aa8.06□□□□□ -1.12
CHRNA3-203ENST00000558903 TTC21AQ8NDW8 1320 aa8.06□□□□□ -1.12
CHRNA3-203ENST00000558903 NLRP6P59044 892 aa8.06□□□□□ -1.12
CHRNA3-203ENST00000558903 CHADLQ6NUI6 762 aa8.06□□□□□ -1.12
CHRNA3-203ENST00000558903 NLRP13Q86W25 1043 aa8.06□□□□□ -1.12
CHRNA3-203ENST00000558903 SPRYD3Q8NCJ5 442 aa8.06□□□□□ -1.12
CHRNA3-203ENST00000558903 CABLES1Q8TDN4 633 aa8.06□□□□□ -1.12
CHRNA3-203ENST00000558903 RNF25Q96BH1 459 aaPredicted RBP8.06□□□□□ -1.12
CHRNA3-203ENST00000558903 PUS7Q96PZ0 661 aaKnown RBP8.06□□□□□ -1.12
CHRNA3-203ENST00000558903 CCDC9Q9Y3X0 531 aaKnown RBP8.06□□□□□ -1.12
CHRNA3-203ENST00000558903 FAM208AQ9UK61 1670 aaKnown RBP8.05□□□□□ -1.12
CHRNA3-203ENST00000558903 CPSF1Q10570 1443 aaKnown RBP8.05□□□□□ -1.12
CHRNA3-203ENST00000558903 SOX12O15370 315 aa8.05□□□□□ -1.12
CHRNA3-203ENST00000558903 SLC12A5Q9H2X9 1139 aa8.05□□□□□ -1.12
CHRNA3-203ENST00000558903 PRDM11Q9NQV5 511 aa8.05□□□□□ -1.12
CHRNA3-203ENST00000558903 TTC21BQ7Z4L5 1316 aa8.04□□□□□ -1.12
CHRNA3-203ENST00000558903 SLIT3O75094 1523 aa8.04□□□□□ -1.12
CHRNA3-203ENST00000558903 WNK3Q9BYP7 1800 aa8.04□□□□□ -1.12
CHRNA3-203ENST00000558903 PAXIP1Q6ZW49 1069 aaPredicted RBP8.04□□□□□ -1.12
CHRNA3-203ENST00000558903 VSIG10Q8N0Z9 540 aa8.04□□□□□ -1.12
CHRNA3-203ENST00000558903 USP21Q9UK80 565 aa8.04□□□□□ -1.12
CHRNA3-203ENST00000558903 CD163L1Q9NR16 1453 aa8.04□□□□□ -1.12
CHRNA3-203ENST00000558903 NSD3Q9BZ95 1437 aa8.03□□□□□ -1.12
CHRNA3-203ENST00000558903 MAP2P11137 1827 aaKnown RBP8.03□□□□□ -1.12
CHRNA3-203ENST00000558903 A0A0G2JS52 829 aa8.03□□□□□ -1.12
CHRNA3-203ENST00000558903 ZC3H6P61129 1189 aaKnown RBP8.03□□□□□ -1.12
CHRNA3-203ENST00000558903 MYT1Q01538 1121 aa8.03□□□□□ -1.12
CHRNA3-203ENST00000558903 ZNF467Q7Z7K2 595 aaPredicted RBP8.03□□□□□ -1.12
CHRNA3-203ENST00000558903 KCNH5Q8NCM2 988 aa8.03□□□□□ -1.12
CHRNA3-203ENST00000558903 KIAA0232Q92628 1395 aa8.02□□□□□ -1.13
CHRNA3-203ENST00000558903 COG3Q96JB2 828 aa8.02□□□□□ -1.13
CHRNA3-203ENST00000558903 RYDENQ9NUL5 291 aaKnown RBP8.02□□□□□ -1.13
CHRNA3-203ENST00000558903 TRPC5Q9UL62 973 aaPredicted RBP8.02□□□□□ -1.13
CHRNA3-203ENST00000558903 LMO7Q8WWI1 1683 aa8.02□□□□□ -1.13
CHRNA3-203ENST00000558903 PYGBP11216 843 aa8.01□□□□□ -1.13
CHRNA3-203ENST00000558903 EVA1CP58658 441 aa8.01□□□□□ -1.13
CHRNA3-203ENST00000558903 NME9Q86XW9 330 aa8.01□□□□□ -1.13
CHRNA3-203ENST00000558903 CFAP44Q96MT7 982 aa8.01□□□□□ -1.13
CHRNA3-203ENST00000558903 ABCC6O95255 1503 aa8.01□□□□□ -1.13
CHRNA3-203ENST00000558903 SSH2Q76I76 1423 aa8.01□□□□□ -1.13
CHRNA3-203ENST00000558903 BRWD3Q6RI45 1802 aa8.01□□□□□ -1.13
CHRNA3-203ENST00000558903 USP19O94966 1318 aa8.01□□□□□ -1.13
CHRNA3-203ENST00000558903 CGNL1Q0VF96 1302 aa8.01□□□□□ -1.13
CHRNA3-203ENST00000558903 SLIT2O94813 1529 aa8□□□□□ -1.13
CHRNA3-203ENST00000558903 NFAT5O94916 1531 aa8□□□□□ -1.13
CHRNA3-203ENST00000558903 RXRBP28702 533 aa8□□□□□ -1.13
CHRNA3-203ENST00000558903 CHRNA2Q15822 529 aa8□□□□□ -1.13
CHRNA3-203ENST00000558903 PIP4P2Q8N4L2 257 aa8□□□□□ -1.13
CHRNA3-203ENST00000558903 TSPYL2Q9H2G4 693 aaPredicted RBP8□□□□□ -1.13
CHRNA3-203ENST00000558903 STRN4Q9NRL3 753 aa8□□□□□ -1.13
CHRNA3-203ENST00000558903 BTG4Q9NY30 223 aa8□□□□□ -1.13
CHRNA3-203ENST00000558903 KIF7Q2M1P5 1343 aa8□□□□□ -1.13
CHRNA3-203ENST00000558903 CCDC7Q96M83 1385 aa7.99□□□□□ -1.13
CHRNA3-203ENST00000558903 OVOS2A0A0J9YW53 1432 aa7.99□□□□□ -1.13
CHRNA3-203ENST00000558903 STK25O00506 426 aa7.99□□□□□ -1.13
CHRNA3-203ENST00000558903 GCP02774 474 aa7.99□□□□□ -1.13
CHRNA3-203ENST00000558903 CSB-PGBD3P0DP91 1061 aa7.99□□□□□ -1.13
CHRNA3-203ENST00000558903 OVOS2Q6IE36 1432 aa7.99□□□□□ -1.13
CHRNA3-203ENST00000558903 SMG6Q86US8 1419 aaKnown RBP7.99□□□□□ -1.13
CHRNA3-203ENST00000558903 UNC5CLQ8IV45 518 aa7.99□□□□□ -1.13
CHRNA3-203ENST00000558903 QTRT2Q9H974 415 aaKnown RBP7.99□□□□□ -1.13
CHRNA3-203ENST00000558903 KNSTRNQ9Y448 316 aa7.99□□□□□ -1.13
CHRNA3-203ENST00000558903 RGPD2P0DJD1 1756 aa7.99□□□□□ -1.13
CHRNA3-203ENST00000558903 COL18A1P39060 1754 aa7.99□□□□□ -1.13
CHRNA3-203ENST00000558903 CPDO75976 1380 aa7.98□□□□□ -1.13
CHRNA3-203ENST00000558903 USP31Q70CQ4 1352 aa7.98□□□□□ -1.13
CHRNA3-203ENST00000558903 GLI3P10071 1580 aa7.98□□□□□ -1.13
CHRNA3-203ENST00000558903 ATRNO75882 1429 aa7.98□□□□□ -1.13
CHRNA3-203ENST00000558903 RBM6P78332 1123 aaKnown RBP7.98□□□□□ -1.13
CHRNA3-203ENST00000558903 CNGB1Q14028 1251 aaPredicted RBP7.98□□□□□ -1.13
CHRNA3-203ENST00000558903 GGNBP2Q9H3C7 697 aa7.98□□□□□ -1.13
CHRNA3-203ENST00000558903 PARP4Q9UKK3 1724 aaKnown RBP7.98□□□□□ -1.13
CHRNA3-203ENST00000558903 NSD2O96028 1365 aa7.97□□□□□ -1.13
CHRNA3-203ENST00000558903 FAM83GA6ND36 823 aa7.97□□□□□ -1.13
CHRNA3-203ENST00000558903 AMPHP49418 695 aa7.97□□□□□ -1.13
CHRNA3-203ENST00000558903 POTEAQ6S8J7 498 aa7.97□□□□□ -1.13
CHRNA3-203ENST00000558903 FNBP4Q8N3X1 1017 aaPredicted RBP7.97□□□□□ -1.13
CHRNA3-203ENST00000558903 PANK3Q9H999 370 aa7.97□□□□□ -1.13
CHRNA3-203ENST00000558903 ZRANB1Q9UGI0 708 aa7.97□□□□□ -1.13
CHRNA3-203ENST00000558903 COL5A2P05997 1499 aaPredicted RBP7.97□□□□□ -1.13
CHRNA3-203ENST00000558903 BCL9LQ86UU0 1499 aa7.97□□□□□ -1.13
CHRNA3-203ENST00000558903 CDK12Q9NYV4 1490 aaPredicted RBP7.97□□□□□ -1.13
CHRNA3-203ENST00000558903 CAMTA1Q9Y6Y1 1673 aa7.97□□□□□ -1.13
CHRNA3-203ENST00000558903 VPS72Q15906 364 aa7.96□□□□□ -1.14
CHRNA3-203ENST00000558903 TOM1L2Q6ZVM7 507 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms