RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 SLIT1O75093 1534 aa13.84□□□□□ -0.19
CSPG4P5-201ENST00000558731 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.84□□□□□ -0.19
CSPG4P5-201ENST00000558731 ZKSCAN2Q63HK3 967 aa13.84□□□□□ -0.19
CSPG4P5-201ENST00000558731 TRMT2AQ8IZ69 625 aaKnown RBP13.84□□□□□ -0.19
CSPG4P5-201ENST00000558731 TTC21AQ8NDW8 1320 aa13.84□□□□□ -0.19
CSPG4P5-201ENST00000558731 RLBP1P12271 317 aa13.84□□□□□ -0.19
CSPG4P5-201ENST00000558731 KRT24Q2M2I5 525 aa13.84□□□□□ -0.19
CSPG4P5-201ENST00000558731 NOB1Q9ULX3 412 aaKnown RBP13.83□□□□□ -0.2
CSPG4P5-201ENST00000558731 CABLES1Q8TDN4 633 aa13.83□□□□□ -0.2
CSPG4P5-201ENST00000558731 SETD1AO15047 1707 aaKnown RBP13.83□□□□□ -0.2
CSPG4P5-201ENST00000558731 LMOD3Q0VAK6 560 aa13.82□□□□□ -0.2
CSPG4P5-201ENST00000558731 CCDC27Q2M243 656 aa13.82□□□□□ -0.2
CSPG4P5-201ENST00000558731 TSPYL6Q8N831 410 aa13.82□□□□□ -0.2
CSPG4P5-201ENST00000558731 CALD1Q05682 793 aaKnown RBP13.82□□□□□ -0.2
CSPG4P5-201ENST00000558731 EYA1Q99502 592 aa13.82□□□□□ -0.2
CSPG4P5-201ENST00000558731 CDC42BPGQ6DT37 1551 aa13.82□□□□□ -0.2
CSPG4P5-201ENST00000558731 CSB-PGBD3P0DP91 1061 aa13.82□□□□□ -0.2
CSPG4P5-201ENST00000558731 GNAI1P63096 354 aa13.82□□□□□ -0.2
CSPG4P5-201ENST00000558731 KRT28Q7Z3Y7 464 aa13.82□□□□□ -0.2
CSPG4P5-201ENST00000558731 DZIP1LQ8IYY4 767 aaKnown RBP13.81□□□□□ -0.2
CSPG4P5-201ENST00000558731 LRRC59Q96AG4 307 aaKnown RBP13.81□□□□□ -0.2
CSPG4P5-201ENST00000558731 MBIPQ9NS73 344 aa13.81□□□□□ -0.2
CSPG4P5-201ENST00000558731 PRKCSHP14314 528 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P5-201ENST00000558731 RTL5Q5HYW3 569 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P5-201ENST00000558731 SETD1BQ9UPS6 1966 aaKnown RBP13.81□□□□□ -0.2
CSPG4P5-201ENST00000558731 PTCH1Q13635 1447 aa13.8□□□□□ -0.2
CSPG4P5-201ENST00000558731 MED14O60244 1454 aa13.8□□□□□ -0.2
CSPG4P5-201ENST00000558731 DIP2AQ14689 1571 aa13.8□□□□□ -0.2
CSPG4P5-201ENST00000558731 TWISTNBQ3B726 338 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P5-201ENST00000558731 PNPLA6Q8IY17 1366 aa13.8□□□□□ -0.2
CSPG4P5-201ENST00000558731 C19orf44Q9H6X5 657 aa13.79□□□□□ -0.2
CSPG4P5-201ENST00000558731 MAP2P11137 1827 aaKnown RBP13.79□□□□□ -0.2
CSPG4P5-201ENST00000558731 HOXC9P31274 260 aa13.79□□□□□ -0.2
CSPG4P5-201ENST00000558731 MTHFSDQ2M296 383 aaKnown RBP13.79□□□□□ -0.2
CSPG4P5-201ENST00000558731 TSPYL4Q9UJ04 414 aa13.79□□□□□ -0.2
CSPG4P5-201ENST00000558731 FLT4P35916 1363 aa13.78□□□□□ -0.2
CSPG4P5-201ENST00000558731 USP32Q8NFA0 1604 aa13.78□□□□□ -0.2
CSPG4P5-201ENST00000558731 AATKQ6ZMQ8 1374 aa13.78□□□□□ -0.2
CSPG4P5-201ENST00000558731 C8orf58Q8NAV2 365 aa13.78□□□□□ -0.2
CSPG4P5-201ENST00000558731 SHPRHQ149N8 1683 aa13.78□□□□□ -0.2
CSPG4P5-201ENST00000558731 TMEM94Q12767 1356 aa13.78□□□□□ -0.2
CSPG4P5-201ENST00000558731 PHF23Q9BUL5 403 aaPredicted RBP13.78□□□□□ -0.2
CSPG4P5-201ENST00000558731 TRIM27P14373 513 aa13.77□□□□□ -0.2
CSPG4P5-201ENST00000558731 CHRNA2Q15822 529 aa13.77□□□□□ -0.2
CSPG4P5-201ENST00000558731 C1orf115Q9H7X2 142 aa13.77□□□□□ -0.2
CSPG4P5-201ENST00000558731 LRRC7Q96NW7 1537 aa13.77□□□□□ -0.2
CSPG4P5-201ENST00000558731 IPO8O15397 1037 aaKnown RBP13.77□□□□□ -0.21
CSPG4P5-201ENST00000558731 PDE3AQ14432 1141 aa13.77□□□□□ -0.21
CSPG4P5-201ENST00000558731 PIK3R4Q99570 1358 aa13.77□□□□□ -0.21
CSPG4P5-201ENST00000558731 COL3A1P02461 1466 aaPredicted RBP13.77□□□□□ -0.21
CSPG4P5-201ENST00000558731 NLRP2Q9NX02 1062 aa13.77□□□□□ -0.21
CSPG4P5-201ENST00000558731 KIF20BQ96Q89 1820 aa13.76□□□□□ -0.21
CSPG4P5-201ENST00000558731 SLC4A10Q6U841 1118 aa13.76□□□□□ -0.21
CSPG4P5-201ENST00000558731 CENPQQ7L2Z9 268 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P5-201ENST00000558731 GCP02774 474 aa13.76□□□□□ -0.21
CSPG4P5-201ENST00000558731 IGHDP01880 384 aa13.76□□□□□ -0.21
CSPG4P5-201ENST00000558731 ATF7IPQ6VMQ6 1270 aa13.76□□□□□ -0.21
CSPG4P5-201ENST00000558731 TMEM57Q8N5G2 664 aa13.76□□□□□ -0.21
CSPG4P5-201ENST00000558731 ANP32AP39687 249 aaKnown RBP13.75□□□□□ -0.21
CSPG4P5-201ENST00000558731 IQSEC2Q5JU85 1478 aa13.75□□□□□ -0.21
CSPG4P5-201ENST00000558731 CDK12Q9NYV4 1490 aaPredicted RBP13.75□□□□□ -0.21
CSPG4P5-201ENST00000558731 SBNO1A3KN83 1393 aa13.74□□□□□ -0.21
CSPG4P5-201ENST00000558731 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
CSPG4P5-201ENST00000558731 ITSN1Q15811 1721 aa13.74□□□□□ -0.21
CSPG4P5-201ENST00000558731 OVOS2A0A0J9YW53 1432 aa13.74□□□□□ -0.21
CSPG4P5-201ENST00000558731 OVOS2Q6IE36 1432 aa13.74□□□□□ -0.21
CSPG4P5-201ENST00000558731 APBB1O00213 710 aa13.74□□□□□ -0.21
CSPG4P5-201ENST00000558731 IFT57Q9NWB7 429 aa13.74□□□□□ -0.21
CSPG4P5-201ENST00000558731 RGPD8O14715 1765 aaPredicted RBP13.73□□□□□ -0.21
CSPG4P5-201ENST00000558731 EIF2S2P20042 333 aaKnown RBP13.73□□□□□ -0.21
CSPG4P5-201ENST00000558731 MVPQ14764 893 aaKnown RBP13.73□□□□□ -0.21
CSPG4P5-201ENST00000558731 GAS2L2Q8NHY3 880 aa13.73□□□□□ -0.21
CSPG4P5-201ENST00000558731 ADGRL3Q9HAR2 1447 aa13.73□□□□□ -0.21
CSPG4P5-201ENST00000558731 KCNH5Q8NCM2 988 aa13.73□□□□□ -0.21
CSPG4P5-201ENST00000558731 ZNF335Q9H4Z2 1342 aaPredicted RBP13.73□□□□□ -0.21
CSPG4P5-201ENST00000558731 MS4A1P11836 297 aa13.73□□□□□ -0.21
CSPG4P5-201ENST00000558731 PDE4AP27815 886 aa13.73□□□□□ -0.21
CSPG4P5-201ENST00000558731 NBPF6Q5VWK0 638 aa13.73□□□□□ -0.21
CSPG4P5-201ENST00000558731 NBPF4Q96M43 638 aa13.73□□□□□ -0.21
CSPG4P5-201ENST00000558731 RTN4Q9NQC3 1192 aaKnown RBP13.73□□□□□ -0.21
CSPG4P5-201ENST00000558731 PCDHB15Q9Y5E8 787 aa13.73□□□□□ -0.21
CSPG4P5-201ENST00000558731 KIF16BQ96L93 1317 aa13.72□□□□□ -0.21
CSPG4P5-201ENST00000558731 USP35Q9P2H5 1018 aa13.72□□□□□ -0.21
CSPG4P5-201ENST00000558731 ZNF428Q96B54 188 aa13.72□□□□□ -0.21
CSPG4P5-201ENST00000558731 KNDC1Q76NI1 1749 aa13.72□□□□□ -0.21
CSPG4P5-201ENST00000558731 VAMP4O75379 141 aa13.72□□□□□ -0.21
CSPG4P5-201ENST00000558731 MPRIPQ6WCQ1 1025 aa13.72□□□□□ -0.21
CSPG4P5-201ENST00000558731 IL16Q14005 1332 aa13.71□□□□□ -0.21
CSPG4P5-201ENST00000558731 A0A0G2JS52 829 aa13.71□□□□□ -0.21
CSPG4P5-201ENST00000558731 ZNF530Q6P9A1 599 aaPredicted RBP13.71□□□□□ -0.21
CSPG4P5-201ENST00000558731 CADPS2Q86UW7 1296 aa13.71□□□□□ -0.21
CSPG4P5-201ENST00000558731 KDM4FA0A1W2PPD8 638 aa13.71□□□□□ -0.21
CSPG4P5-201ENST00000558731 ANKRD24Q8TF21 1146 aa13.71□□□□□ -0.21
CSPG4P5-201ENST00000558731 GNAT3A8MTJ3 354 aa13.71□□□□□ -0.22
CSPG4P5-201ENST00000558731 TEFQ10587 303 aa13.71□□□□□ -0.22
CSPG4P5-201ENST00000558731 ANKARQ7Z5J8 1434 aa13.7□□□□□ -0.22
CSPG4P5-201ENST00000558731 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
CSPG4P5-201ENST00000558731 RWDD1Q9H446 243 aaPredicted RBP13.7□□□□□ -0.22
CSPG4P5-201ENST00000558731 DDX19BQ9UMR2 479 aa13.7□□□□□ -0.22
CSPG4P5-201ENST00000558731 C1orf141Q5JVX7 400 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms