RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 RAPGEF3O95398 923 aa15.17■□□□□ 0.02
MARK3-213ENST00000558611 ZBED2Q9BTP6 218 aa15.17■□□□□ 0.02
MARK3-213ENST00000558611 KDM5CP41229 1560 aa15.16■□□□□ 0.02
MARK3-213ENST00000558611 HOXB1P14653 301 aaPredicted RBP15.16■□□□□ 0.02
MARK3-213ENST00000558611 EFCAB2Q5VUJ9 269 aa15.16■□□□□ 0.02
MARK3-213ENST00000558611 TSC1Q92574 1164 aa15.16■□□□□ 0.02
MARK3-213ENST00000558611 GPATCH8Q9UKJ3 1502 aaKnown RBP15.16■□□□□ 0.02
MARK3-213ENST00000558611 SCAPERQ9BY12 1400 aa15.16■□□□□ 0.02
MARK3-213ENST00000558611 SLC4A3P48751 1232 aa15.15■□□□□ 0.02
MARK3-213ENST00000558611 MTMR7Q9Y216 660 aa15.15■□□□□ 0.02
MARK3-213ENST00000558611 ZFYVE16Q7Z3T8 1539 aa15.15■□□□□ 0.02
MARK3-213ENST00000558611 HECW2Q9P2P5 1572 aa15.15■□□□□ 0.02
MARK3-213ENST00000558611 ZNF518AQ6AHZ1 1483 aa15.14■□□□□ 0.01
MARK3-213ENST00000558611 C6orf229H3BNL8 230 aa15.14■□□□□ 0.01
MARK3-213ENST00000558611 HDGFP51858 240 aaKnown RBP15.14■□□□□ 0.01
MARK3-213ENST00000558611 SCUBE2Q9NQ36 999 aa15.14■□□□□ 0.01
MARK3-213ENST00000558611 SIGLEC1Q9BZZ2 1709 aa15.14■□□□□ 0.01
MARK3-213ENST00000558611 RABGEF1Q9UJ41 708 aa15.13■□□□□ 0.01
MARK3-213ENST00000558611 LRRC9Q6ZRR7 1453 aa15.13■□□□□ 0.01
MARK3-213ENST00000558611 MAGI2Q86UL8 1455 aa15.13■□□□□ 0.01
MARK3-213ENST00000558611 BCORL1Q5H9F3 1711 aa15.12■□□□□ 0.01
MARK3-213ENST00000558611 SLF2Q8IX21 1173 aa15.12■□□□□ 0.01
MARK3-213ENST00000558611 CCNB3Q8WWL7 1395 aa15.11■□□□□ 0.01
MARK3-213ENST00000558611 LMOD1P29536 600 aaPredicted RBP15.11■□□□□ 0.01
MARK3-213ENST00000558611 MAMSTRQ6ZN01 415 aa15.11■□□□□ 0.01
MARK3-213ENST00000558611 UCN2Q96RP3 112 aa15.11■□□□□ 0.01
MARK3-213ENST00000558611 NCOA2Q15596 1464 aa15.11■□□□□ 0.01
MARK3-213ENST00000558611 SYCP2Q9BX26 1530 aa15.11■□□□□ 0.01
MARK3-213ENST00000558611 ARHGEF12Q9NZN5 1544 aa15.11■□□□□ 0.01
MARK3-213ENST00000558611 SNPHO15079 494 aa15.1■□□□□ 0.01
MARK3-213ENST00000558611 PRR7Q8TB68 274 aa15.1■□□□□ 0.01
MARK3-213ENST00000558611 EPS8L1Q8TE68 723 aa15.1■□□□□ 0.01
MARK3-213ENST00000558611 TFIP11Q9UBB9 837 aaKnown RBP15.1■□□□□ 0.01
MARK3-213ENST00000558611 KIDINS220Q9ULH0 1771 aa15.1■□□□□ 0.01
MARK3-213ENST00000558611 ADAMTSL3P82987 1691 aa15.09■□□□□ 0.01
MARK3-213ENST00000558611 ATG7O95352 703 aa15.09■□□□□ 0.01
MARK3-213ENST00000558611 FUT2Q10981 343 aa15.09■□□□□ 0.01
MARK3-213ENST00000558611 PNMA1Q8ND90 353 aa15.09■□□□□ 0.01
MARK3-213ENST00000558611 SLC4A5Q9BY07 1137 aa15.09■□□□□ 0.01
MARK3-213ENST00000558611 ABCA6Q8N139 1617 aa15.09■□□□□ 0.01
MARK3-213ENST00000558611 YEATS2Q9ULM3 1422 aa15.09■□□□□ 0.01
MARK3-213ENST00000558611 DIP2CQ9Y2E4 1556 aa15.08■□□□□ 0
MARK3-213ENST00000558611 SEMA3FQ13275 785 aa15.08■□□□□ 0
MARK3-213ENST00000558611 PLEKHH2Q8IVE3 1493 aa15.08■□□□□ 0
MARK3-213ENST00000558611 ATP6V1AP38606 617 aa15.07■□□□□ 0
MARK3-213ENST00000558611 TRAPPC8Q9Y2L5 1435 aa15.06■□□□□ 0
MARK3-213ENST00000558611 INO80Q9ULG1 1556 aaPredicted RBP15.06■□□□□ 0
MARK3-213ENST00000558611 NR6A1Q15406 480 aa15.05■□□□□ -0
MARK3-213ENST00000558611 FAM98CQ17RN3 349 aaKnown RBP15.05■□□□□ -0
MARK3-213ENST00000558611 MLH3Q9UHC1 1453 aa15.05■□□□□ -0
MARK3-213ENST00000558611 REREQ9P2R6 1566 aa15.05■□□□□ -0
MARK3-213ENST00000558611 FER1L4A9Z1Z3 1794 aa15.05■□□□□ -0
MARK3-213ENST00000558611 MADDQ8WXG6 1647 aa15.04■□□□□ -0
MARK3-213ENST00000558611 KIAA1107Q9UPP5 1409 aa15.04■□□□□ -0
MARK3-213ENST00000558611 POTEB2H3BUK9 544 aa15.04■□□□□ -0
MARK3-213ENST00000558611 CFHP08603 1231 aa15.04■□□□□ -0
MARK3-213ENST00000558611 CFDP1Q9UEE9 299 aaPredicted RBP15.04■□□□□ -0
MARK3-213ENST00000558611 SEPT9Q9UHD8 586 aaPredicted RBP15.04■□□□□ -0
MARK3-213ENST00000558611 MAFBQ9Y5Q3 323 aaPredicted RBP15.04■□□□□ -0
MARK3-213ENST00000558611 EIF4G2P78344 907 aaKnown RBP eCLIP15.03■□□□□ -0
MARK3-213ENST00000558611 DESI1Q6ICB0 168 aa15.03■□□□□ -0
MARK3-213ENST00000558611 RIMS1Q86UR5 1692 aaKnown RBP15.03■□□□□ -0
MARK3-213ENST00000558611 ATP10AO60312 1499 aa15.02■□□□□ -0
MARK3-213ENST00000558611 CAMSAP2Q08AD1 1489 aa15.02■□□□□ -0
MARK3-213ENST00000558611 C9orf84Q5VXU9 1444 aa15.02■□□□□ -0
MARK3-213ENST00000558611 RETREG3Q86VR2 466 aa15.02■□□□□ -0
MARK3-213ENST00000558611 AFAP1Q8N556 730 aa15.02■□□□□ -0
MARK3-213ENST00000558611 VRTNQ9H8Y1 702 aa15.02■□□□□ -0
MARK3-213ENST00000558611 ADGBQ8N7X0 1667 aa15.02□□□□□ -0.01
MARK3-213ENST00000558611 ATP7AQ04656 1500 aa15.02□□□□□ -0.01
MARK3-213ENST00000558611 TMEM88BA6NKF7 163 aa15.01□□□□□ -0.01
MARK3-213ENST00000558611 KANK4Q5T7N3 995 aaPredicted RBP15.01□□□□□ -0.01
MARK3-213ENST00000558611 SYMPKQ92797 1274 aaKnown RBP15.01□□□□□ -0.01
MARK3-213ENST00000558611 PSEN2P49810 448 aa15□□□□□ -0.01
MARK3-213ENST00000558611 ARHGEF5Q12774 1597 aa14.99□□□□□ -0.01
MARK3-213ENST00000558611 ATP9BO43861 1147 aa14.99□□□□□ -0.01
MARK3-213ENST00000558611 FOXD4L5Q5VV16 416 aaPredicted RBP14.99□□□□□ -0.01
MARK3-213ENST00000558611 FOXD4L4Q8WXT5 416 aaPredicted RBP14.99□□□□□ -0.01
MARK3-213ENST00000558611 MBD5Q9P267 1494 aa14.99□□□□□ -0.01
MARK3-213ENST00000558611 CROCC2H7BZ55 1655 aa14.98□□□□□ -0.01
MARK3-213ENST00000558611 ARHGAP33O14559 1287 aa14.98□□□□□ -0.01
MARK3-213ENST00000558611 PER1O15534 1290 aaPredicted RBP14.98□□□□□ -0.01
MARK3-213ENST00000558611 TBC1D9Q6ZT07 1266 aa14.98□□□□□ -0.01
MARK3-213ENST00000558611 MYOM3Q5VTT5 1437 aa14.98□□□□□ -0.01
MARK3-213ENST00000558611 CARNS1A5YM72 827 aa14.97□□□□□ -0.01
MARK3-213ENST00000558611 HNRNPMP52272 730 aaKnown RBP eCLIP14.97□□□□□ -0.01
MARK3-213ENST00000558611 KMT5BQ4FZB7 885 aa14.97□□□□□ -0.01
MARK3-213ENST00000558611 SAMD7Q7Z3H4 446 aa14.97□□□□□ -0.01
MARK3-213ENST00000558611 LAPTM4BQ86VI4 370 aa14.97□□□□□ -0.01
MARK3-213ENST00000558611 IVNS1ABPQ9Y6Y0 642 aa14.97□□□□□ -0.01
MARK3-213ENST00000558611 ARID4BQ4LE39 1312 aaPredicted RBP14.96□□□□□ -0.01
MARK3-213ENST00000558611 ZNF644Q9H582 1327 aaPredicted RBP14.96□□□□□ -0.01
MARK3-213ENST00000558611 CCDC141Q6ZP82 1450 aa14.96□□□□□ -0.01
MARK3-213ENST00000558611 PTPN23Q9H3S7 1636 aa14.96□□□□□ -0.01
MARK3-213ENST00000558611 Q3C1V9 767 aa14.96□□□□□ -0.01
MARK3-213ENST00000558611 PLXNC1O60486 1568 aa14.95□□□□□ -0.02
MARK3-213ENST00000558611 MIA2Q96PC5 1412 aa14.95□□□□□ -0.02
MARK3-213ENST00000558611 NR1H3Q13133 447 aa14.95□□□□□ -0.02
MARK3-213ENST00000558611 MYT1LQ9UL68 1186 aa14.95□□□□□ -0.02
MARK3-213ENST00000558611 AGLP35573 1532 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms