RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 MPHOSPH10O00566 681 aaKnown RBP16.54■□□□□ 0.24
SPG11-210ENST00000558319 ERLIN2O94905 339 aa16.54■□□□□ 0.24
SPG11-210ENST00000558319 USP5P45974 858 aa16.54■□□□□ 0.24
SPG11-210ENST00000558319 GNAI1P63096 354 aa16.54■□□□□ 0.24
SPG11-210ENST00000558319 ZHX1Q9UKY1 873 aaPredicted RBP16.54■□□□□ 0.24
SPG11-210ENST00000558319 EXOSC9Q06265 439 aaKnown RBP16.54■□□□□ 0.24
SPG11-210ENST00000558319 NACADO15069 1562 aa16.54■□□□□ 0.24
SPG11-210ENST00000558319 EIF3JO75822 258 aaKnown RBP16.54■□□□□ 0.24
SPG11-210ENST00000558319 ZRSR2Q15696 482 aaKnown RBP16.54■□□□□ 0.24
SPG11-210ENST00000558319 PSMA5P28066 241 aa16.54■□□□□ 0.24
SPG11-210ENST00000558319 PDCL3Q9H2J4 239 aa16.53■□□□□ 0.24
SPG11-210ENST00000558319 LRRFIP2Q9Y608 721 aaKnown RBP16.53■□□□□ 0.24
SPG11-210ENST00000558319 DHX57Q6P158 1386 aaKnown RBP16.53■□□□□ 0.24
SPG11-210ENST00000558319 CCDC192P0DO97 292 aa16.53■□□□□ 0.24
SPG11-210ENST00000558319 LRRCC1Q9C099 1032 aa16.53■□□□□ 0.24
SPG11-210ENST00000558319 RUSC2Q8N2Y8 1516 aa16.53■□□□□ 0.24
SPG11-210ENST00000558319 RRS1Q15050 365 aaKnown RBP16.53■□□□□ 0.24
SPG11-210ENST00000558319 BCAR3O75815 825 aa16.52■□□□□ 0.24
SPG11-210ENST00000558319 XBP1P17861 261 aa16.52■□□□□ 0.24
SPG11-210ENST00000558319 SYCP1Q15431 976 aa16.52■□□□□ 0.24
SPG11-210ENST00000558319 PPFIBP1Q86W92 1011 aa16.52■□□□□ 0.24
SPG11-210ENST00000558319 NINLQ9Y2I6 1382 aa16.52■□□□□ 0.24
SPG11-210ENST00000558319 CGNQ9P2M7 1197 aaKnown RBP16.52■□□□□ 0.24
SPG11-210ENST00000558319 SLC4A2P04920 1241 aa16.52■□□□□ 0.23
SPG11-210ENST00000558319 STK38Q15208 465 aa16.52■□□□□ 0.23
SPG11-210ENST00000558319 PAXIP1Q6ZW49 1069 aaPredicted RBP16.52■□□□□ 0.23
SPG11-210ENST00000558319 PRAM1Q96QH2 718 aa16.52■□□□□ 0.23
SPG11-210ENST00000558319 WWC3Q9ULE0 1092 aa16.52■□□□□ 0.23
SPG11-210ENST00000558319 UACAQ9BZF9 1416 aa16.52■□□□□ 0.23
SPG11-210ENST00000558319 TTC16Q8NEE8 873 aa16.51■□□□□ 0.23
SPG11-210ENST00000558319 ERLIN1O75477 346 aa16.51■□□□□ 0.23
SPG11-210ENST00000558319 CLASRPQ8N2M8 674 aaKnown RBP16.51■□□□□ 0.23
SPG11-210ENST00000558319 IPO4Q8TEX9 1081 aaKnown RBP16.51■□□□□ 0.23
SPG11-210ENST00000558319 PTPRGP23470 1445 aa16.51■□□□□ 0.23
SPG11-210ENST00000558319 USP8P40818 1118 aa16.5■□□□□ 0.23
SPG11-210ENST00000558319 CFAP70Q5T0N1 1121 aa16.5■□□□□ 0.23
SPG11-210ENST00000558319 FILIP1Q7Z7B0 1213 aa16.5■□□□□ 0.23
SPG11-210ENST00000558319 ZNHIT6Q9NWK9 470 aaKnown RBP16.5■□□□□ 0.23
SPG11-210ENST00000558319 CCDC97Q96F63 343 aaPredicted RBP16.5■□□□□ 0.23
SPG11-210ENST00000558319 TMX1Q9H3N1 280 aa16.5■□□□□ 0.23
SPG11-210ENST00000558319 SART3Q15020 963 aaKnown RBP16.5■□□□□ 0.23
SPG11-210ENST00000558319 SULT6B1Q6IMI4 303 aa16.49■□□□□ 0.23
SPG11-210ENST00000558319 ZFP91Q96JP5 570 aaPredicted RBP16.49■□□□□ 0.23
SPG11-210ENST00000558319 POLR3GO15318 223 aaPredicted RBP16.49■□□□□ 0.23
SPG11-210ENST00000558319 CCDC30Q5VVM6 783 aa16.49■□□□□ 0.23
SPG11-210ENST00000558319 SSR1P43307 286 aaKnown RBP16.48■□□□□ 0.23
SPG11-210ENST00000558319 DHX8Q14562 1220 aaKnown RBP16.48■□□□□ 0.23
SPG11-210ENST00000558319 ME1P48163 572 aa16.48■□□□□ 0.23
SPG11-210ENST00000558319 CCDC158Q5M9N0 1113 aa16.48■□□□□ 0.23
SPG11-210ENST00000558319 ZC3H6P61129 1189 aaKnown RBP16.48■□□□□ 0.23
SPG11-210ENST00000558319 ZNF396Q96N95 335 aaPredicted RBP16.48■□□□□ 0.23
SPG11-210ENST00000558319 CCDC69A6NI79 296 aa16.48■□□□□ 0.23
SPG11-210ENST00000558319 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
SPG11-210ENST00000558319 IL1RAPL2Q9NP60 686 aa16.47■□□□□ 0.23
SPG11-210ENST00000558319 INCENPQ9NQS7 918 aa16.47■□□□□ 0.23
SPG11-210ENST00000558319 WDR70Q9NW82 654 aa16.47■□□□□ 0.23
SPG11-210ENST00000558319 GOLGA6L10A0A0M3HER8 536 aa16.47■□□□□ 0.23
SPG11-210ENST00000558319 TWISTNBQ3B726 338 aaPredicted RBP16.47■□□□□ 0.23
SPG11-210ENST00000558319 TCP11L2Q8N4U5 519 aa16.47■□□□□ 0.23
SPG11-210ENST00000558319 TNNT1P13805 278 aa16.46■□□□□ 0.23
SPG11-210ENST00000558319 HSP90AB4PQ58FF6 505 aa16.46■□□□□ 0.23
SPG11-210ENST00000558319 CWC27Q6UX04 472 aaKnown RBP16.46■□□□□ 0.23
SPG11-210ENST00000558319 SLC26A8Q96RN1 970 aa16.46■□□□□ 0.23
SPG11-210ENST00000558319 RABEP1Q15276 862 aa16.46■□□□□ 0.23
SPG11-210ENST00000558319 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.46■□□□□ 0.23
SPG11-210ENST00000558319 K7ELQ4 463 aaPredicted RBP16.46■□□□□ 0.23
SPG11-210ENST00000558319 USHBP1Q8N6Y0 703 aa16.46■□□□□ 0.23
SPG11-210ENST00000558319 LARP6Q9BRS8 491 aaKnown RBP16.46■□□□□ 0.23
SPG11-210ENST00000558319 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
SPG11-210ENST00000558319 SYCE3A1L190 88 aa16.45■□□□□ 0.22
SPG11-210ENST00000558319 SPDYE4A6NLX3 237 aa16.45■□□□□ 0.22
SPG11-210ENST00000558319 LIG1P18858 919 aa16.45■□□□□ 0.22
SPG11-210ENST00000558319 AFAP1Q8N556 730 aa16.45■□□□□ 0.22
SPG11-210ENST00000558319 MPHOSPH8Q99549 860 aa16.45■□□□□ 0.22
SPG11-210ENST00000558319 RAI14Q9P0K7 980 aa16.45■□□□□ 0.22
SPG11-210ENST00000558319 CAMK4Q16566 473 aa16.45■□□□□ 0.22
SPG11-210ENST00000558319 DDX11Q96FC9 970 aa16.45■□□□□ 0.22
SPG11-210ENST00000558319 HDGFL1Q5TGJ6 251 aa16.45■□□□□ 0.22
SPG11-210ENST00000558319 AKNAQ7Z591 1439 aa16.45■□□□□ 0.22
SPG11-210ENST00000558319 PPFIA3O75145 1194 aa16.45■□□□□ 0.22
SPG11-210ENST00000558319 SKAP1Q86WV1 359 aa16.45■□□□□ 0.22
SPG11-210ENST00000558319 SLC3A2P08195 630 aaKnown RBP16.44■□□□□ 0.22
SPG11-210ENST00000558319 TATP17735 454 aaPredicted RBP16.44■□□□□ 0.22
SPG11-210ENST00000558319 NUTM1Q86Y26 1132 aa16.44■□□□□ 0.22
SPG11-210ENST00000558319 AACSQ86V21 672 aa16.44■□□□□ 0.22
SPG11-210ENST00000558319 TMCO3Q6UWJ1 677 aa16.44■□□□□ 0.22
SPG11-210ENST00000558319 CCDC82Q8N4S0 544 aa16.44■□□□□ 0.22
SPG11-210ENST00000558319 PSMD1Q99460 953 aa16.44■□□□□ 0.22
SPG11-210ENST00000558319 ZNF76P36508 570 aa16.44■□□□□ 0.22
SPG11-210ENST00000558319 PLEKHO1Q53GL0 409 aaPredicted RBP16.44■□□□□ 0.22
SPG11-210ENST00000558319 GPRASP1Q5JY77 1395 aa16.43■□□□□ 0.22
SPG11-210ENST00000558319 TXLNAP40222 546 aa16.43■□□□□ 0.22
SPG11-210ENST00000558319 UBXN4Q92575 508 aa16.43■□□□□ 0.22
SPG11-210ENST00000558319 BACH2Q9BYV9 841 aa16.43■□□□□ 0.22
SPG11-210ENST00000558319 RSPH4AQ5TD94 716 aa16.43■□□□□ 0.22
SPG11-210ENST00000558319 CDK19Q9BWU1 502 aa16.43■□□□□ 0.22
SPG11-210ENST00000558319 SLC12A5Q9H2X9 1139 aa16.43■□□□□ 0.22
SPG11-210ENST00000558319 CABP1Q9NZU7 370 aa16.43■□□□□ 0.22
SPG11-210ENST00000558319 DNA2P51530 1060 aa16.43■□□□□ 0.22
SPG11-210ENST00000558319 GRM1Q13255 1194 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms