RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 SYCE3A1L190 88 aa13.27□□□□□ -0.29
SEMA4B-204ENST00000558065 FAM184AQ8NB25 1140 aa13.27□□□□□ -0.29
SEMA4B-204ENST00000558065 NBPF3Q9H094 633 aa13.27□□□□□ -0.29
SEMA4B-204ENST00000558065 TMEM63CQ9P1W3 806 aa13.27□□□□□ -0.29
SEMA4B-204ENST00000558065 ANKRD20A12PQ8NF67 263 aa13.27□□□□□ -0.29
SEMA4B-204ENST00000558065 KIF2CQ99661 725 aa13.27□□□□□ -0.29
SEMA4B-204ENST00000558065 PLEKHH2Q8IVE3 1493 aa13.26□□□□□ -0.29
SEMA4B-204ENST00000558065 FAM210AQ96ND0 272 aa13.26□□□□□ -0.29
SEMA4B-204ENST00000558065 MYBBP1AQ9BQG0 1328 aaKnown RBP13.26□□□□□ -0.29
SEMA4B-204ENST00000558065 CWC22Q9HCG8 908 aaKnown RBP13.26□□□□□ -0.29
SEMA4B-204ENST00000558065 SHROOM2Q13796 1616 aa13.26□□□□□ -0.29
SEMA4B-204ENST00000558065 COQ9O75208 318 aa13.26□□□□□ -0.29
SEMA4B-204ENST00000558065 ZSCAN26Q16670 478 aa13.26□□□□□ -0.29
SEMA4B-204ENST00000558065 CARMIL1Q5VZK9 1371 aa13.26□□□□□ -0.29
SEMA4B-204ENST00000558065 CEP89Q96ST8 783 aa13.26□□□□□ -0.29
SEMA4B-204ENST00000558065 MAGEA9P43362 315 aa13.25□□□□□ -0.29
SEMA4B-204ENST00000558065 MORC1Q86VD1 984 aa13.25□□□□□ -0.29
SEMA4B-204ENST00000558065 PYCARDQ9ULZ3 195 aa13.25□□□□□ -0.29
SEMA4B-204ENST00000558065 FBXO38Q6PIJ6 1188 aa13.25□□□□□ -0.29
SEMA4B-204ENST00000558065 FAXDC2Q96IV6 333 aa13.25□□□□□ -0.29
SEMA4B-204ENST00000558065 PAXBP1Q9Y5B6 917 aa13.25□□□□□ -0.29
SEMA4B-204ENST00000558065 THOC2Q8NI27 1593 aaKnown RBP13.25□□□□□ -0.29
SEMA4B-204ENST00000558065 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
SEMA4B-204ENST00000558065 SMTNL1A8MU46 457 aa13.25□□□□□ -0.29
SEMA4B-204ENST00000558065 MCTP1Q6DN14 999 aa13.25□□□□□ -0.29
SEMA4B-204ENST00000558065 PTPN23Q9H3S7 1636 aa13.24□□□□□ -0.29
SEMA4B-204ENST00000558065 PTPRCP08575 1304 aa13.24□□□□□ -0.29
SEMA4B-204ENST00000558065 CALRP27797 417 aaKnown RBP13.24□□□□□ -0.29
SEMA4B-204ENST00000558065 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.29
SEMA4B-204ENST00000558065 KCNF1Q9H3M0 494 aa13.24□□□□□ -0.29
SEMA4B-204ENST00000558065 LRRFIP2Q9Y608 721 aaKnown RBP13.24□□□□□ -0.29
SEMA4B-204ENST00000558065 SPAG9O60271 1321 aaKnown RBP13.24□□□□□ -0.29
SEMA4B-204ENST00000558065 RRP7BPQ9NSQ0 103 aa13.24□□□□□ -0.29
SEMA4B-204ENST00000558065 H0YHG0 523 aa13.24□□□□□ -0.29
SEMA4B-204ENST00000558065 CTAGE5O15320 804 aa13.24□□□□□ -0.29
SEMA4B-204ENST00000558065 LIG1P18858 919 aa13.24□□□□□ -0.29
SEMA4B-204ENST00000558065 SARNPP82979 210 aaKnown RBP13.24□□□□□ -0.29
SEMA4B-204ENST00000558065 SCP2P22307 547 aa13.23□□□□□ -0.29
SEMA4B-204ENST00000558065 TTC19Q6DKK2 380 aaPredicted RBP13.23□□□□□ -0.29
SEMA4B-204ENST00000558065 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
SEMA4B-204ENST00000558065 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
SEMA4B-204ENST00000558065 ST5P78524 1137 aa13.22□□□□□ -0.29
SEMA4B-204ENST00000558065 CD2BP2O95400 341 aaKnown RBP13.22□□□□□ -0.29
SEMA4B-204ENST00000558065 TATDN2Q93075 761 aa13.22□□□□□ -0.29
SEMA4B-204ENST00000558065 SMARCE1Q969G3 411 aa13.22□□□□□ -0.29
SEMA4B-204ENST00000558065 FOXD4L1Q9NU39 408 aa13.22□□□□□ -0.29
SEMA4B-204ENST00000558065 GTF3C6Q969F1 213 aa13.22□□□□□ -0.29
SEMA4B-204ENST00000558065 MIA2Q96PC5 1412 aa13.22□□□□□ -0.29
SEMA4B-204ENST00000558065 INSRP06213 1382 aa13.21□□□□□ -0.29
SEMA4B-204ENST00000558065 DUSP27Q5VZP5 1158 aa13.21□□□□□ -0.29
SEMA4B-204ENST00000558065 FBXO18Q8NFZ0 1043 aa13.21□□□□□ -0.29
SEMA4B-204ENST00000558065 FHOD1Q9Y613 1164 aa13.21□□□□□ -0.29
SEMA4B-204ENST00000558065 SLFNL1Q499Z3 407 aa13.21□□□□□ -0.29
SEMA4B-204ENST00000558065 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.21□□□□□ -0.29
SEMA4B-204ENST00000558065 NSFL1CQ9UNZ2 370 aaKnown RBP13.21□□□□□ -0.29
SEMA4B-204ENST00000558065 KIF15Q9NS87 1388 aa13.21□□□□□ -0.3
SEMA4B-204ENST00000558065 PIK3R5Q8WYR1 880 aa13.21□□□□□ -0.3
SEMA4B-204ENST00000558065 E9PCH4 1651 aa13.2□□□□□ -0.3
SEMA4B-204ENST00000558065 PLA2G4AP47712 749 aa13.2□□□□□ -0.3
SEMA4B-204ENST00000558065 NBPF8Q3BBV2 869 aa13.2□□□□□ -0.3
SEMA4B-204ENST00000558065 CWC15Q9P013 229 aaKnown RBP13.2□□□□□ -0.3
SEMA4B-204ENST00000558065 CAND2O75155 1236 aa13.2□□□□□ -0.3
SEMA4B-204ENST00000558065 IPO7O95373 1038 aaKnown RBP13.2□□□□□ -0.3
SEMA4B-204ENST00000558065 NAIF1Q69YI7 327 aaPredicted RBP13.2□□□□□ -0.3
SEMA4B-204ENST00000558065 MMS22LQ6ZRQ5 1243 aa13.2□□□□□ -0.3
SEMA4B-204ENST00000558065 IQUBQ8NA54 791 aa13.2□□□□□ -0.3
SEMA4B-204ENST00000558065 NAIPQ13075 1403 aa13.2□□□□□ -0.3
SEMA4B-204ENST00000558065 CYP2E1P05181 493 aaPredicted RBP13.2□□□□□ -0.3
SEMA4B-204ENST00000558065 FAM163BP0C2L3 166 aa13.2□□□□□ -0.3
SEMA4B-204ENST00000558065 TMTC2Q8N394 836 aa13.2□□□□□ -0.3
SEMA4B-204ENST00000558065 ERBB3P21860 1342 aa13.2□□□□□ -0.3
SEMA4B-204ENST00000558065 NOM1Q5C9Z4 860 aaKnown RBP13.19□□□□□ -0.3
SEMA4B-204ENST00000558065 ZNF428Q96B54 188 aa13.19□□□□□ -0.3
SEMA4B-204ENST00000558065 EXOC6BQ9Y2D4 811 aa13.19□□□□□ -0.3
SEMA4B-204ENST00000558065 TDRD9Q8NDG6 1382 aaKnown RBP13.19□□□□□ -0.3
SEMA4B-204ENST00000558065 PAX7P23759 505 aa13.19□□□□□ -0.3
SEMA4B-204ENST00000558065 GOLGA5Q8TBA6 731 aa13.19□□□□□ -0.3
SEMA4B-204ENST00000558065 PLEKHH1Q9ULM0 1364 aa13.19□□□□□ -0.3
SEMA4B-204ENST00000558065 CPP00450 1065 aa13.18□□□□□ -0.3
SEMA4B-204ENST00000558065 GAS2L2Q8NHY3 880 aa13.18□□□□□ -0.3
SEMA4B-204ENST00000558065 HFM1A2PYH4 1435 aa13.18□□□□□ -0.3
SEMA4B-204ENST00000558065 NUCKS1Q9H1E3 243 aaKnown RBP13.18□□□□□ -0.3
SEMA4B-204ENST00000558065 USP25Q9UHP3 1055 aa13.18□□□□□ -0.3
SEMA4B-204ENST00000558065 UHRF1BP1LA0JNW5 1464 aa13.18□□□□□ -0.3
SEMA4B-204ENST00000558065 L3MBTL2Q969R5 705 aa13.18□□□□□ -0.3
SEMA4B-204ENST00000558065 ADCY5O95622 1261 aa13.17□□□□□ -0.3
SEMA4B-204ENST00000558065 ARMCX6Q7L4S7 300 aa13.17□□□□□ -0.3
SEMA4B-204ENST00000558065 C21orf2O43822 256 aa13.17□□□□□ -0.3
SEMA4B-204ENST00000558065 TSHZ1Q6ZSZ6 1077 aa13.17□□□□□ -0.3
SEMA4B-204ENST00000558065 TSPY26PQ9H489 355 aa13.17□□□□□ -0.3
SEMA4B-204ENST00000558065 IGF1RP08069 1367 aa13.16□□□□□ -0.3
SEMA4B-204ENST00000558065 TEX35Q5T0J7 233 aa13.16□□□□□ -0.3
SEMA4B-204ENST00000558065 CLUAP1Q96AJ1 413 aa13.16□□□□□ -0.3
SEMA4B-204ENST00000558065 MIEF2Q96C03 454 aa13.16□□□□□ -0.3
SEMA4B-204ENST00000558065 PDZRN3Q9UPQ7 1066 aa13.16□□□□□ -0.3
SEMA4B-204ENST00000558065 HECW1Q76N89 1606 aa13.16□□□□□ -0.3
SEMA4B-204ENST00000558065 ETAA1Q9NY74 926 aa13.16□□□□□ -0.3
SEMA4B-204ENST00000558065 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
SEMA4B-204ENST00000558065 PRPF40AO75400 957 aaKnown RBP13.16□□□□□ -0.3
SEMA4B-204ENST00000558065 TPM3P06753 285 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms