RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 NFE2L2Q16236 605 aa23.74■■□□□ 1.39
SDR39U1-220ENST00000556548 PROSER2Q86WR7 435 aaPredicted RBP23.74■■□□□ 1.39
SDR39U1-220ENST00000556548 THUMPD2Q9BTF0 503 aaKnown RBP23.74■■□□□ 1.39
SDR39U1-220ENST00000556548 HSPA2P54652 639 aa23.73■■□□□ 1.39
SDR39U1-220ENST00000556548 SULT6B1Q6IMI4 303 aa23.73■■□□□ 1.39
SDR39U1-220ENST00000556548 LAS1LQ9Y4W2 734 aaKnown RBP23.73■■□□□ 1.39
SDR39U1-220ENST00000556548 EXOSC9Q06265 439 aaKnown RBP23.72■■□□□ 1.39
SDR39U1-220ENST00000556548 PIK3C2AO00443 1686 aa23.72■■□□□ 1.39
SDR39U1-220ENST00000556548 PEAK1Q9H792 1746 aa23.72■■□□□ 1.39
SDR39U1-220ENST00000556548 AMPHP49418 695 aa23.71■■□□□ 1.39
SDR39U1-220ENST00000556548 ORAI2Q96SN7 254 aa23.71■■□□□ 1.39
SDR39U1-220ENST00000556548 PSME1Q06323 249 aa23.7■■□□□ 1.38
SDR39U1-220ENST00000556548 PLEKHG5O94827 1062 aa23.69■■□□□ 1.38
SDR39U1-220ENST00000556548 XPCQ01831 940 aaPredicted RBP23.68■■□□□ 1.38
SDR39U1-220ENST00000556548 PANK1Q8TE04 598 aa23.68■■□□□ 1.38
SDR39U1-220ENST00000556548 RBM19Q9Y4C8 960 aaKnown RBP23.67■■□□□ 1.38
SDR39U1-220ENST00000556548 IL16Q14005 1332 aa23.67■■□□□ 1.38
SDR39U1-220ENST00000556548 FAM83GA6ND36 823 aa23.66■■□□□ 1.38
SDR39U1-220ENST00000556548 TNNQ9UQP3 1299 aa23.66■■□□□ 1.38
SDR39U1-220ENST00000556548 FOXO3O43524 673 aa23.66■■□□□ 1.38
SDR39U1-220ENST00000556548 DCTN1Q14203 1278 aa23.65■■□□□ 1.38
SDR39U1-220ENST00000556548 SBNO1A3KN83 1393 aa23.65■■□□□ 1.38
SDR39U1-220ENST00000556548 FLT4P35916 1363 aa23.65■■□□□ 1.38
SDR39U1-220ENST00000556548 COG6Q9Y2V7 657 aa23.64■■□□□ 1.38
SDR39U1-220ENST00000556548 CLUAP1Q96AJ1 413 aa23.62■■□□□ 1.37
SDR39U1-220ENST00000556548 LTV1Q96GA3 475 aaPredicted RBP23.62■■□□□ 1.37
SDR39U1-220ENST00000556548 PDE3AQ14432 1141 aa23.61■■□□□ 1.37
SDR39U1-220ENST00000556548 NWD1Q149M9 1564 aa23.61■■□□□ 1.37
SDR39U1-220ENST00000556548 ZBTB7CA1YPR0 619 aa23.61■■□□□ 1.37
SDR39U1-220ENST00000556548 LMOD2Q6P5Q4 547 aa23.6■■□□□ 1.37
SDR39U1-220ENST00000556548 SKAP1Q86WV1 359 aa23.6■■□□□ 1.37
SDR39U1-220ENST00000556548 SMC4Q9NTJ3 1288 aa23.6■■□□□ 1.37
SDR39U1-220ENST00000556548 PRKCSHP14314 528 aaPredicted RBP23.6■■□□□ 1.37
SDR39U1-220ENST00000556548 HOXC9P31274 260 aa23.6■■□□□ 1.37
SDR39U1-220ENST00000556548 EYA1Q99502 592 aa23.6■■□□□ 1.37
SDR39U1-220ENST00000556548 KDM4FA0A1W2PPD8 638 aa23.59■■□□□ 1.37
SDR39U1-220ENST00000556548 RLBP1P12271 317 aa23.59■■□□□ 1.37
SDR39U1-220ENST00000556548 SSH1Q8WYL5 1049 aa23.59■■□□□ 1.37
SDR39U1-220ENST00000556548 C19orf44Q9H6X5 657 aa23.59■■□□□ 1.37
SDR39U1-220ENST00000556548 MARF1Q9Y4F3 1742 aaKnown RBP23.58■■□□□ 1.37
SDR39U1-220ENST00000556548 CT47B1P0C2W7 299 aaPredicted RBP23.58■■□□□ 1.36
SDR39U1-220ENST00000556548 LMOD3Q0VAK6 560 aa23.58■■□□□ 1.36
SDR39U1-220ENST00000556548 CALD1Q05682 793 aaKnown RBP23.56■■□□□ 1.36
SDR39U1-220ENST00000556548 TMEM94Q12767 1356 aa23.56■■□□□ 1.36
SDR39U1-220ENST00000556548 ELL2O00472 640 aaPredicted RBP23.56■■□□□ 1.36
SDR39U1-220ENST00000556548 MBIPQ9NS73 344 aa23.56■■□□□ 1.36
SDR39U1-220ENST00000556548 GNAI1P63096 354 aa23.55■■□□□ 1.36
SDR39U1-220ENST00000556548 MCM10Q7L590 875 aa23.55■■□□□ 1.36
SDR39U1-220ENST00000556548 ARHGEF10O15013 1369 aa23.55■■□□□ 1.36
SDR39U1-220ENST00000556548 IFT57Q9NWB7 429 aa23.55■■□□□ 1.36
SDR39U1-220ENST00000556548 DLG5Q8TDM6 1919 aa23.55■■□□□ 1.36
SDR39U1-220ENST00000556548 RGPD1P0DJD0 1748 aa23.54■■□□□ 1.36
SDR39U1-220ENST00000556548 ATF3P18847 181 aa23.54■■□□□ 1.36
SDR39U1-220ENST00000556548 TSPYL6Q8N831 410 aa23.54■■□□□ 1.36
SDR39U1-220ENST00000556548 ZNF853P0CG23 659 aa23.53■■□□□ 1.36
SDR39U1-220ENST00000556548 ZKSCAN2Q63HK3 967 aa23.53■■□□□ 1.36
SDR39U1-220ENST00000556548 C1orf167Q5SNV9 1468 aa23.52■■□□□ 1.36
SDR39U1-220ENST00000556548 MTHFSDQ2M296 383 aaKnown RBP23.52■■□□□ 1.36
SDR39U1-220ENST00000556548 KRT28Q7Z3Y7 464 aa23.52■■□□□ 1.36
SDR39U1-220ENST00000556548 DDX17Q92841 729 aaKnown RBP23.52■■□□□ 1.36
SDR39U1-220ENST00000556548 CFAP44Q96MT7 982 aa23.52■■□□□ 1.36
SDR39U1-220ENST00000556548 NOB1Q9ULX3 412 aaKnown RBP23.52■■□□□ 1.36
SDR39U1-220ENST00000556548 IGSF1Q8N6C5 1336 aa23.52■■□□□ 1.36
SDR39U1-220ENST00000556548 KDM2BQ8NHM5 1336 aa23.52■■□□□ 1.36
SDR39U1-220ENST00000556548 USHBP1Q8N6Y0 703 aa23.51■■□□□ 1.35
SDR39U1-220ENST00000556548 STRCP1A6NGW2 1772 aa23.5■■□□□ 1.35
SDR39U1-220ENST00000556548 TCERG1O14776 1098 aaKnown RBP23.5■■□□□ 1.35
SDR39U1-220ENST00000556548 FTSJ3Q8IY81 847 aaKnown RBP23.5■■□□□ 1.35
SDR39U1-220ENST00000556548 CENPQQ7L2Z9 268 aaPredicted RBP23.49■■□□□ 1.35
SDR39U1-220ENST00000556548 DZIP1LQ8IYY4 767 aaKnown RBP23.49■■□□□ 1.35
SDR39U1-220ENST00000556548 VAMP4O75379 141 aa23.48■■□□□ 1.35
SDR39U1-220ENST00000556548 TRIM27P14373 513 aa23.48■■□□□ 1.35
SDR39U1-220ENST00000556548 C8orf58Q8NAV2 365 aa23.48■■□□□ 1.35
SDR39U1-220ENST00000556548 USP54Q70EL1 1684 aa23.48■■□□□ 1.35
SDR39U1-220ENST00000556548 KDRP35968 1356 aa23.47■■□□□ 1.35
SDR39U1-220ENST00000556548 KCNH5Q8NCM2 988 aa23.47■■□□□ 1.35
SDR39U1-220ENST00000556548 IP6K1Q92551 441 aa23.47■■□□□ 1.35
SDR39U1-220ENST00000556548 KIF24Q5T7B8 1368 aa23.47■■□□□ 1.35
SDR39U1-220ENST00000556548 IGHDP01880 384 aa23.47■■□□□ 1.35
SDR39U1-220ENST00000556548 GCP02774 474 aa23.47■■□□□ 1.35
SDR39U1-220ENST00000556548 ATF7IPQ6VMQ6 1270 aa23.45■■□□□ 1.35
SDR39U1-220ENST00000556548 NFAT5O94916 1531 aa23.45■■□□□ 1.34
SDR39U1-220ENST00000556548 TWISTNBQ3B726 338 aaPredicted RBP23.45■■□□□ 1.34
SDR39U1-220ENST00000556548 MIS18AQ9NYP9 233 aa23.45■■□□□ 1.34
SDR39U1-220ENST00000556548 MVPQ14764 893 aaKnown RBP23.44■■□□□ 1.34
SDR39U1-220ENST00000556548 ALDH1L2Q3SY69 923 aa23.44■■□□□ 1.34
SDR39U1-220ENST00000556548 MST1RQ04912 1400 aa23.44■■□□□ 1.34
SDR39U1-220ENST00000556548 KRT24Q2M2I5 525 aa23.44■■□□□ 1.34
SDR39U1-220ENST00000556548 RTF1Q92541 710 aaKnown RBP23.44■■□□□ 1.34
SDR39U1-220ENST00000556548 LTN1O94822 1766 aa23.44■■□□□ 1.34
SDR39U1-220ENST00000556548 LMTK3Q96Q04 1460 aa23.43■■□□□ 1.34
SDR39U1-220ENST00000556548 RTL1A6NKG5 1358 aa23.42■■□□□ 1.34
SDR39U1-220ENST00000556548 NBPF6Q5VWK0 638 aa23.42■■□□□ 1.34
SDR39U1-220ENST00000556548 ITPRIPQ8IWB1 547 aa23.42■■□□□ 1.34
SDR39U1-220ENST00000556548 NBPF4Q96M43 638 aa23.42■■□□□ 1.34
SDR39U1-220ENST00000556548 LRRC59Q96AG4 307 aaKnown RBP23.42■■□□□ 1.34
SDR39U1-220ENST00000556548 PCDHB15Q9Y5E8 787 aa23.42■■□□□ 1.34
SDR39U1-220ENST00000556548 KIF16BQ96L93 1317 aa23.41■■□□□ 1.34
SDR39U1-220ENST00000556548 GAS2L2Q8NHY3 880 aa23.41■■□□□ 1.34
SDR39U1-220ENST00000556548 CHL1O00533 1208 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms