RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 FANCAO15360 1455 aa9.25□□□□□ -0.93
HIF1A-208ENST00000556237 SPAG9O60271 1321 aaKnown RBP9.25□□□□□ -0.93
HIF1A-208ENST00000556237 CLSPNQ9HAW4 1339 aa9.25□□□□□ -0.93
HIF1A-208ENST00000556237 MAPKBP1O60336 1514 aa9.25□□□□□ -0.93
HIF1A-208ENST00000556237 ARHGEF12Q9NZN5 1544 aa9.25□□□□□ -0.93
HIF1A-208ENST00000556237 TRAPPC8Q9Y2L5 1435 aa9.24□□□□□ -0.93
HIF1A-208ENST00000556237 CCDC141Q6ZP82 1450 aa9.24□□□□□ -0.93
HIF1A-208ENST00000556237 DDX11L8A8MPP1 907 aa9.24□□□□□ -0.93
HIF1A-208ENST00000556237 ATP6V1AP38606 617 aa9.24□□□□□ -0.93
HIF1A-208ENST00000556237 FUT2Q10981 343 aa9.24□□□□□ -0.93
HIF1A-208ENST00000556237 THAP11Q96EK4 314 aa9.24□□□□□ -0.93
HIF1A-208ENST00000556237 FCF1Q9Y324 198 aaKnown RBP9.24□□□□□ -0.93
HIF1A-208ENST00000556237 ARAP3Q8WWN8 1544 aa9.24□□□□□ -0.93
HIF1A-208ENST00000556237 ARHGEF5Q12774 1597 aa9.24□□□□□ -0.93
HIF1A-208ENST00000556237 SYCP2Q9BX26 1530 aa9.23□□□□□ -0.93
HIF1A-208ENST00000556237 FMNL1O95466 1100 aaPredicted RBP9.23□□□□□ -0.93
HIF1A-208ENST00000556237 MPHOSPH9Q99550 1183 aa9.23□□□□□ -0.93
HIF1A-208ENST00000556237 ADGRL2O95490 1459 aa9.22□□□□□ -0.93
HIF1A-208ENST00000556237 CD2BP2O95400 341 aaKnown RBP9.22□□□□□ -0.93
HIF1A-208ENST00000556237 SULF1Q8IWU6 871 aa9.22□□□□□ -0.93
HIF1A-208ENST00000556237 CRIPAKQ8N1N5 446 aa9.22□□□□□ -0.93
HIF1A-208ENST00000556237 KIF15Q9NS87 1388 aa9.22□□□□□ -0.93
HIF1A-208ENST00000556237 GCGRP47871 477 aa9.21□□□□□ -0.94
HIF1A-208ENST00000556237 NEUROD1Q13562 356 aa9.21□□□□□ -0.94
HIF1A-208ENST00000556237 SIN3AQ96ST3 1273 aa9.21□□□□□ -0.94
HIF1A-208ENST00000556237 SLC27A5Q9Y2P5 690 aa9.21□□□□□ -0.94
HIF1A-208ENST00000556237 ANKRD50Q9ULJ7 1429 aa9.21□□□□□ -0.94
HIF1A-208ENST00000556237 ADGRL1O94910 1474 aa9.21□□□□□ -0.94
HIF1A-208ENST00000556237 SHANK2Q9UPX8 1470 aa9.21□□□□□ -0.94
HIF1A-208ENST00000556237 ZMYND10O75800 440 aa9.2□□□□□ -0.94
HIF1A-208ENST00000556237 RAPGEF3O95398 923 aa9.2□□□□□ -0.94
HIF1A-208ENST00000556237 FAM160A2Q8N612 972 aaPredicted RBP9.2□□□□□ -0.94
HIF1A-208ENST00000556237 TOR4AQ9NXH8 423 aa9.2□□□□□ -0.94
HIF1A-208ENST00000556237 SALL2Q9Y467 1007 aaPredicted RBP9.2□□□□□ -0.94
HIF1A-208ENST00000556237 ABCC1P33527 1531 aa9.2□□□□□ -0.94
HIF1A-208ENST00000556237 GLI2P10070 1586 aa9.2□□□□□ -0.94
HIF1A-208ENST00000556237 AVPP01185 164 aa9.19□□□□□ -0.94
HIF1A-208ENST00000556237 CYP4X1Q8N118 509 aa9.19□□□□□ -0.94
HIF1A-208ENST00000556237 NLRP7Q8WX94 980 aa9.19□□□□□ -0.94
HIF1A-208ENST00000556237 RTEL1-TNFRSF6BF6WH68 1400 aa9.19□□□□□ -0.94
HIF1A-208ENST00000556237 KDM6BO15054 1643 aa9.18□□□□□ -0.94
HIF1A-208ENST00000556237 NUP155O75694 1391 aa9.18□□□□□ -0.94
HIF1A-208ENST00000556237 BARGINQ6ZT62 677 aa9.18□□□□□ -0.94
HIF1A-208ENST00000556237 NEO1Q92859 1461 aa9.18□□□□□ -0.94
HIF1A-208ENST00000556237 PRDM9Q9NQV7 894 aa9.18□□□□□ -0.94
HIF1A-208ENST00000556237 CROCC2H7BZ55 1655 aa9.17□□□□□ -0.94
HIF1A-208ENST00000556237 GCC2Q8IWJ2 1684 aa9.17□□□□□ -0.94
HIF1A-208ENST00000556237 ADGBQ8N7X0 1667 aa9.17□□□□□ -0.94
HIF1A-208ENST00000556237 CTC1Q2NKJ3 1217 aa9.17□□□□□ -0.94
HIF1A-208ENST00000556237 BRICD5Q6PL45 260 aa9.17□□□□□ -0.94
HIF1A-208ENST00000556237 TREML4Q6UXN2 200 aa9.17□□□□□ -0.94
HIF1A-208ENST00000556237 MAST1Q9Y2H9 1570 aa9.16□□□□□ -0.94
HIF1A-208ENST00000556237 DENND4BO75064 1496 aaPredicted RBP9.16□□□□□ -0.94
HIF1A-208ENST00000556237 ZBTB24O43167 697 aaPredicted RBP9.16□□□□□ -0.94
HIF1A-208ENST00000556237 GRIPAP1Q4V328 841 aa9.16□□□□□ -0.94
HIF1A-208ENST00000556237 MSS51Q4VC12 460 aa9.16□□□□□ -0.94
HIF1A-208ENST00000556237 PHOX2BQ99453 314 aa9.16□□□□□ -0.94
HIF1A-208ENST00000556237 DIP2BQ9P265 1576 aa9.16□□□□□ -0.94
HIF1A-208ENST00000556237 KIF3BO15066 747 aa9.15□□□□□ -0.94
HIF1A-208ENST00000556237 AXIN1O15169 862 aa9.15□□□□□ -0.94
HIF1A-208ENST00000556237 DACH1Q9UI36 760 aa9.15□□□□□ -0.94
HIF1A-208ENST00000556237 MAP3K4Q9Y6R4 1608 aa9.15□□□□□ -0.94
HIF1A-208ENST00000556237 CFAP74Q9C0B2 1584 aa9.15□□□□□ -0.95
HIF1A-208ENST00000556237 LCE2AQ5TA79 106 aaPredicted RBP9.14□□□□□ -0.95
HIF1A-208ENST00000556237 RNF19BQ6ZMZ0 732 aa9.14□□□□□ -0.95
HIF1A-208ENST00000556237 DUOX2Q9NRD8 1548 aa9.14□□□□□ -0.95
HIF1A-208ENST00000556237 ZNF518AQ6AHZ1 1483 aa9.14□□□□□ -0.95
HIF1A-208ENST00000556237 DHX29Q7Z478 1369 aaKnown RBP9.13□□□□□ -0.95
HIF1A-208ENST00000556237 TSPOAP1O95153 1857 aa9.13□□□□□ -0.95
HIF1A-208ENST00000556237 TTC24A2A3L6 582 aaPredicted RBP9.13□□□□□ -0.95
HIF1A-208ENST00000556237 SMCPP49901 116 aaPredicted RBP9.13□□□□□ -0.95
HIF1A-208ENST00000556237 TIMELESSQ9UNS1 1208 aa9.13□□□□□ -0.95
HIF1A-208ENST00000556237 TEX14Q8IWB6 1497 aa9.13□□□□□ -0.95
HIF1A-208ENST00000556237 POGZQ7Z3K3 1410 aa9.13□□□□□ -0.95
HIF1A-208ENST00000556237 IRF6O14896 467 aa9.12□□□□□ -0.95
HIF1A-208ENST00000556237 PRKCSHP14314 528 aaPredicted RBP9.12□□□□□ -0.95
HIF1A-208ENST00000556237 MAP2K5Q13163 448 aa9.12□□□□□ -0.95
HIF1A-208ENST00000556237 Q3C1V9 767 aa9.12□□□□□ -0.95
HIF1A-208ENST00000556237 TPRNQ4KMQ1 711 aa9.12□□□□□ -0.95
HIF1A-208ENST00000556237 GMPR2Q9P2T1 348 aaKnown RBP9.12□□□□□ -0.95
HIF1A-208ENST00000556237 ATP7AQ04656 1500 aa9.11□□□□□ -0.95
HIF1A-208ENST00000556237 PZPP20742 1482 aa9.11□□□□□ -0.95
HIF1A-208ENST00000556237 MLH3Q9UHC1 1453 aa9.11□□□□□ -0.95
HIF1A-208ENST00000556237 C11orf95C9JLR9 678 aaPredicted RBP9.11□□□□□ -0.95
HIF1A-208ENST00000556237 ERBINQ96RT1 1412 aa9.11□□□□□ -0.95
HIF1A-208ENST00000556237 PLXNC1O60486 1568 aa9.11□□□□□ -0.95
HIF1A-208ENST00000556237 ANKRD30BQ9BXX2 1392 aa9.11□□□□□ -0.95
HIF1A-208ENST00000556237 MINK1Q8N4C8 1332 aaPredicted RBP9.1□□□□□ -0.95
HIF1A-208ENST00000556237 WNT7AO00755 349 aa9.1□□□□□ -0.95
HIF1A-208ENST00000556237 GGT6Q6P531 493 aa9.1□□□□□ -0.95
HIF1A-208ENST00000556237 A2MP01023 1474 aa9.09□□□□□ -0.95
HIF1A-208ENST00000556237 PPP1R15AO75807 674 aaPredicted RBP9.09□□□□□ -0.95
HIF1A-208ENST00000556237 MMP16P51512 607 aa9.09□□□□□ -0.95
HIF1A-208ENST00000556237 TRIM32Q13049 653 aa9.09□□□□□ -0.95
HIF1A-208ENST00000556237 CCDC102AQ96A19 550 aa9.09□□□□□ -0.95
HIF1A-208ENST00000556237 ZFYVE16Q7Z3T8 1539 aa9.09□□□□□ -0.95
HIF1A-208ENST00000556237 KANK1Q14678 1352 aa9.09□□□□□ -0.95
HIF1A-208ENST00000556237 KIF13AQ9H1H9 1805 aa9.08□□□□□ -0.96
HIF1A-208ENST00000556237 WFS1O76024 890 aa9.08□□□□□ -0.96
HIF1A-208ENST00000556237 SNIP1Q8TAD8 396 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms