RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 AKAP2Q9Y2D5 859 aa10.11□□□□□ -0.79
LINC00641-201ENST00000555379 ZNF608Q9ULD9 1512 aaPredicted RBP10.11□□□□□ -0.79
LINC00641-201ENST00000555379 CDC45O75419 566 aa10.11□□□□□ -0.79
LINC00641-201ENST00000555379 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.1□□□□□ -0.79
LINC00641-201ENST00000555379 NFXL1Q6ZNB6 911 aa10.1□□□□□ -0.79
LINC00641-201ENST00000555379 RPRD2Q5VT52 1461 aaKnown RBP10.1□□□□□ -0.79
LINC00641-201ENST00000555379 EIF4G3O43432 1585 aaKnown RBP10.1□□□□□ -0.79
LINC00641-201ENST00000555379 TRAF1Q13077 416 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 HDGFL1Q5TGJ6 251 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 GPATCH8Q9UKJ3 1502 aaKnown RBP10.09□□□□□ -0.79
LINC00641-201ENST00000555379 GNAT3A8MTJ3 354 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 WASLO00401 505 aaPredicted RBP10.09□□□□□ -0.79
LINC00641-201ENST00000555379 PRKAR2BP31323 418 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 NOC3LQ8WTT2 800 aaKnown RBP10.09□□□□□ -0.79
LINC00641-201ENST00000555379 PPIP5K1Q6PFW1 1433 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 IGHMBP2P38935 993 aaKnown RBP10.09□□□□□ -0.79
LINC00641-201ENST00000555379 TMEM132EQ6IEE7 984 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 CCAR1Q8IX12 1150 aaKnown RBP10.09□□□□□ -0.79
LINC00641-201ENST00000555379 RBM42Q9BTD8 480 aaKnown RBP10.09□□□□□ -0.79
LINC00641-201ENST00000555379 TXLNBQ8N3L3 684 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 ZMYND15Q9H091 742 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 CABP1Q9NZU7 370 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 ANO2Q9NQ90 1003 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 GOLGA6L19H0YKK7 550 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 TXLNAP40222 546 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 GPS2Q13227 327 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 TWISTNBQ3B726 338 aaPredicted RBP10.08□□□□□ -0.8
LINC00641-201ENST00000555379 CLUAP1Q96AJ1 413 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 STRN4Q9NRL3 753 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 TMOD3Q9NYL9 352 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 BRD2P25440 801 aaKnown RBP10.08□□□□□ -0.8
LINC00641-201ENST00000555379 KRT32Q14532 448 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 NFE2L2Q16236 605 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 ATP10BO94823 1461 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 TCOF1Q13428 1488 aaKnown RBP10.08□□□□□ -0.8
LINC00641-201ENST00000555379 CDKL5O76039 1030 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 LETM1O95202 739 aaPredicted RBP10.08□□□□□ -0.8
LINC00641-201ENST00000555379 C14orf93Q9H972 538 aaKnown RBP10.08□□□□□ -0.8
LINC00641-201ENST00000555379 CNNM1Q9NRU3 951 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 UHRF1BP1Q6BDS2 1440 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 ATP10AO60312 1499 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 LARP1Q6PKG0 1096 aaKnown RBP10.08□□□□□ -0.8
LINC00641-201ENST00000555379 JMYQ8N9B5 988 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 MPHOSPH8Q99549 860 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 CCDC57Q2TAC2 916 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 NKTRP30414 1462 aaKnown RBP10.07□□□□□ -0.8
LINC00641-201ENST00000555379 RPAP2Q8IXW5 612 aaPredicted RBP10.07□□□□□ -0.8
LINC00641-201ENST00000555379 FBXW7Q969H0 707 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 RRP7AQ9Y3A4 280 aaKnown RBP10.07□□□□□ -0.8
LINC00641-201ENST00000555379 RAB11FIP3O75154 756 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 ALDH1L2Q3SY69 923 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 TCP11L2Q8N4U5 519 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 AMOTL2Q9Y2J4 779 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 TTC39AQ5SRH9 613 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 FAM13BQ9NYF5 915 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 ATF7IPQ6VMQ6 1270 aa10.06□□□□□ -0.8
LINC00641-201ENST00000555379 WASF1Q92558 559 aa10.06□□□□□ -0.8
LINC00641-201ENST00000555379 IFT57Q9NWB7 429 aa10.06□□□□□ -0.8
LINC00641-201ENST00000555379 MAGI2Q86UL8 1455 aa10.06□□□□□ -0.8
LINC00641-201ENST00000555379 RALGAPBQ86X10 1494 aa10.06□□□□□ -0.8
LINC00641-201ENST00000555379 TRIM21P19474 475 aaKnown RBP10.06□□□□□ -0.8
LINC00641-201ENST00000555379 IRX3P78415 501 aaPredicted RBP10.06□□□□□ -0.8
LINC00641-201ENST00000555379 ZPR1O75312 459 aa10.06□□□□□ -0.8
LINC00641-201ENST00000555379 WASHC4Q2M389 1173 aa10.06□□□□□ -0.8
LINC00641-201ENST00000555379 EXOC5O00471 708 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 NAT10Q9H0A0 1025 aaKnown RBP10.05□□□□□ -0.8
LINC00641-201ENST00000555379 IL16Q14005 1332 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 BBXQ8WY36 941 aaPredicted RBP10.05□□□□□ -0.8
LINC00641-201ENST00000555379 PBRM1Q86U86 1689 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 HYPKQ9NX55 129 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 NSD3Q9BZ95 1437 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 BECN2A8MW95 431 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 SULT6B1Q6IMI4 303 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 CCDC73Q6ZRK6 1079 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 NGLY1Q96IV0 654 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 RIMS2Q9UQ26 1411 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 NEUROD6Q96NK8 337 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 CEP126Q9P2H0 1117 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 SMC3Q9UQE7 1217 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 FSD1Q9BTV5 496 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 AEBP1Q8IUX7 1158 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 SLC26A8Q96RN1 970 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 EHMT1Q9H9B1 1298 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 BTBD11A6QL63 1104 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 HMOX1P09601 288 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 CCDC178Q5BJE1 867 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 AXDND1Q5T1B0 1012 aaPredicted RBP10.04□□□□□ -0.8
LINC00641-201ENST00000555379 DHX37Q8IY37 1157 aaKnown RBP10.04□□□□□ -0.8
LINC00641-201ENST00000555379 TRIM22Q8IYM9 498 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 ZNF396Q96N95 335 aaPredicted RBP10.04□□□□□ -0.8
LINC00641-201ENST00000555379 ARHGEF12Q9NZN5 1544 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 LDHCP07864 332 aa10.03□□□□□ -0.8
LINC00641-201ENST00000555379 CCDC27Q2M243 656 aa10.03□□□□□ -0.8
LINC00641-201ENST00000555379 IFNL2Q8IZJ0 200 aa10.03□□□□□ -0.8
LINC00641-201ENST00000555379 TAOK2Q9UL54 1235 aa10.03□□□□□ -0.8
LINC00641-201ENST00000555379 ZFYVE9O95405 1425 aa10.03□□□□□ -0.8
LINC00641-201ENST00000555379 IFIT1P09914 478 aaKnown RBP10.03□□□□□ -0.8
LINC00641-201ENST00000555379 MPHOSPH6Q99547 160 aaKnown RBP10.03□□□□□ -0.8
LINC00641-201ENST00000555379 FMNL2Q96PY5 1086 aa10.03□□□□□ -0.8
LINC00641-201ENST00000555379 ABCA5Q8WWZ7 1642 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms