RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 SMCPP49901 116 aaPredicted RBP10.42□□□□□ -0.74
KTN1-213ENST00000554306 RSPH6AQ9H0K4 717 aa10.42□□□□□ -0.74
KTN1-213ENST00000554306 CASKIN1Q8WXD9 1431 aa10.41□□□□□ -0.74
KTN1-213ENST00000554306 HECW1Q76N89 1606 aa10.41□□□□□ -0.74
KTN1-213ENST00000554306 PCF11O94913 1555 aaKnown RBP10.41□□□□□ -0.74
KTN1-213ENST00000554306 CFAP99D6REC4 459 aa10.41□□□□□ -0.74
KTN1-213ENST00000554306 SMPD1P17405 629 aa10.41□□□□□ -0.74
KTN1-213ENST00000554306 LYPD8Q6UX82 237 aa10.41□□□□□ -0.74
KTN1-213ENST00000554306 FYCO1Q9BQS8 1478 aa10.41□□□□□ -0.74
KTN1-213ENST00000554306 UACAQ9BZF9 1416 aa10.41□□□□□ -0.74
KTN1-213ENST00000554306 ABCA8O94911 1581 aa10.4□□□□□ -0.74
KTN1-213ENST00000554306 CSPP1Q1MSJ5 1256 aa10.4□□□□□ -0.74
KTN1-213ENST00000554306 EHBP1Q8NDI1 1231 aa10.4□□□□□ -0.74
KTN1-213ENST00000554306 LIMD1Q9UGP4 676 aa10.4□□□□□ -0.74
KTN1-213ENST00000554306 PLB1Q6P1J6 1458 aa10.4□□□□□ -0.74
KTN1-213ENST00000554306 J3QL48 77 aa10.39□□□□□ -0.75
KTN1-213ENST00000554306 SH3BP2P78314 561 aa10.39□□□□□ -0.75
KTN1-213ENST00000554306 CYB5RLQ6IPT4 315 aa10.39□□□□□ -0.75
KTN1-213ENST00000554306 CABLES1Q8TDN4 633 aa10.39□□□□□ -0.75
KTN1-213ENST00000554306 NUTM2BA6NNL0 878 aaPredicted RBP10.38□□□□□ -0.75
KTN1-213ENST00000554306 NUTM2EB1AL46 878 aaPredicted RBP10.38□□□□□ -0.75
KTN1-213ENST00000554306 CTHP32929 405 aa10.38□□□□□ -0.75
KTN1-213ENST00000554306 CLK2P49760 499 aaKnown RBP10.38□□□□□ -0.75
KTN1-213ENST00000554306 NUTM2DQ5VT03 806 aaPredicted RBP10.38□□□□□ -0.75
KTN1-213ENST00000554306 NUTM2AQ8IVF1 878 aaPredicted RBP10.38□□□□□ -0.75
KTN1-213ENST00000554306 ABCC2Q92887 1545 aa10.38□□□□□ -0.75
KTN1-213ENST00000554306 LILRB3O75022 631 aa10.37□□□□□ -0.75
KTN1-213ENST00000554306 UHRF1BP1LA0JNW5 1464 aa10.36□□□□□ -0.75
KTN1-213ENST00000554306 CCDC18Q5T9S5 1454 aa10.36□□□□□ -0.75
KTN1-213ENST00000554306 LRRIQ1Q96JM4 1722 aa10.36□□□□□ -0.75
KTN1-213ENST00000554306 BAP1Q92560 729 aa10.36□□□□□ -0.75
KTN1-213ENST00000554306 ARID3CA6NKF2 412 aa10.35□□□□□ -0.75
KTN1-213ENST00000554306 SIAH2O43255 324 aa10.35□□□□□ -0.75
KTN1-213ENST00000554306 ALDH1A1P00352 501 aa10.35□□□□□ -0.75
KTN1-213ENST00000554306 QPCTQ16769 361 aa10.35□□□□□ -0.75
KTN1-213ENST00000554306 LINC01559Q495D7 138 aa10.35□□□□□ -0.75
KTN1-213ENST00000554306 ZNF511Q8NB15 262 aa10.35□□□□□ -0.75
KTN1-213ENST00000554306 ADCY10Q96PN6 1610 aa10.35□□□□□ -0.75
KTN1-213ENST00000554306 NUP153P49790 1475 aaKnown RBP10.35□□□□□ -0.75
KTN1-213ENST00000554306 EPRSP07814 1512 aaKnown RBP10.34□□□□□ -0.75
KTN1-213ENST00000554306 F12P00748 615 aaPredicted RBP10.34□□□□□ -0.75
KTN1-213ENST00000554306 HELBQ8NG08 1087 aaPredicted RBP10.34□□□□□ -0.75
KTN1-213ENST00000554306 TSC1Q92574 1164 aa10.34□□□□□ -0.75
KTN1-213ENST00000554306 DDRGK1Q96HY6 314 aa10.34□□□□□ -0.75
KTN1-213ENST00000554306 KDM4CQ9H3R0 1056 aa10.34□□□□□ -0.75
KTN1-213ENST00000554306 CDK11AQ9UQ88 783 aaPredicted RBP10.34□□□□□ -0.75
KTN1-213ENST00000554306 CFAP43Q8NDM7 1665 aa10.34□□□□□ -0.75
KTN1-213ENST00000554306 MAP3K1Q13233 1512 aa10.33□□□□□ -0.76
KTN1-213ENST00000554306 ZCCHC11Q5TAX3 1644 aaKnown RBP10.33□□□□□ -0.76
KTN1-213ENST00000554306 POTECB2RU33 542 aa10.33□□□□□ -0.76
KTN1-213ENST00000554306 VARSP26640 1264 aaKnown RBP10.33□□□□□ -0.76
KTN1-213ENST00000554306 HPS1Q92902 700 aa10.33□□□□□ -0.76
KTN1-213ENST00000554306 TIAM1Q13009 1591 aa10.33□□□□□ -0.76
KTN1-213ENST00000554306 ATP10BO94823 1461 aa10.32□□□□□ -0.76
KTN1-213ENST00000554306 DACH1Q9UI36 760 aa10.32□□□□□ -0.76
KTN1-213ENST00000554306 WASF2Q9Y6W5 498 aa10.32□□□□□ -0.76
KTN1-213ENST00000554306 CDK13Q14004 1512 aaKnown RBP10.32□□□□□ -0.76
KTN1-213ENST00000554306 KDM5BQ9UGL1 1544 aa10.32□□□□□ -0.76
KTN1-213ENST00000554306 PLEKHD1A6NEE1 506 aa10.31□□□□□ -0.76
KTN1-213ENST00000554306 GPBP1L1Q9HC44 474 aaPredicted RBP10.31□□□□□ -0.76
KTN1-213ENST00000554306 POLR3EQ9NVU0 708 aa10.31□□□□□ -0.76
KTN1-213ENST00000554306 MAP10Q9P2G4 905 aa10.31□□□□□ -0.76
KTN1-213ENST00000554306 PLEKHG3A1L390 1219 aa10.3□□□□□ -0.76
KTN1-213ENST00000554306 RTL5Q5HYW3 569 aaPredicted RBP10.3□□□□□ -0.76
KTN1-213ENST00000554306 MPNDQ8N594 471 aa10.3□□□□□ -0.76
KTN1-213ENST00000554306 ZNF775Q96BV0 537 aaPredicted RBP10.3□□□□□ -0.76
KTN1-213ENST00000554306 PER1O15534 1290 aaPredicted RBP10.29□□□□□ -0.76
KTN1-213ENST00000554306 SKIV2LQ15477 1246 aaKnown RBP10.29□□□□□ -0.76
KTN1-213ENST00000554306 SH3D19Q5HYK7 790 aa10.29□□□□□ -0.76
KTN1-213ENST00000554306 ARMC2Q8NEN0 867 aa10.29□□□□□ -0.76
KTN1-213ENST00000554306 GMPR2Q9P2T1 348 aaKnown RBP10.29□□□□□ -0.76
KTN1-213ENST00000554306 MTUS2Q5JR59 1369 aa10.28□□□□□ -0.76
KTN1-213ENST00000554306 ATP13A2Q9NQ11 1180 aa10.28□□□□□ -0.76
KTN1-213ENST00000554306 C11orf95C9JLR9 678 aaPredicted RBP10.27□□□□□ -0.77
KTN1-213ENST00000554306 PPARGC1BQ86YN6 1023 aaKnown RBP10.27□□□□□ -0.77
KTN1-213ENST00000554306 FAM174AQ8TBP5 190 aa10.27□□□□□ -0.77
KTN1-213ENST00000554306 FAM117AQ9C073 453 aa10.27□□□□□ -0.77
KTN1-213ENST00000554306 LRRC9Q6ZRR7 1453 aa10.27□□□□□ -0.77
KTN1-213ENST00000554306 EHBP1L1Q8N3D4 1523 aa10.27□□□□□ -0.77
KTN1-213ENST00000554306 KANK4Q5T7N3 995 aaPredicted RBP10.26□□□□□ -0.77
KTN1-213ENST00000554306 SENP2Q9HC62 589 aa10.26□□□□□ -0.77
KTN1-213ENST00000554306 TLL2Q9Y6L7 1015 aa10.26□□□□□ -0.77
KTN1-213ENST00000554306 SUPT6HQ7KZ85 1726 aaKnown RBP10.26□□□□□ -0.77
KTN1-213ENST00000554306 TROQ12816 1431 aaPredicted RBP10.25□□□□□ -0.77
KTN1-213ENST00000554306 BPHLQ86WA6 291 aaPredicted RBP10.25□□□□□ -0.77
KTN1-213ENST00000554306 AGERQ15109 404 aa10.24□□□□□ -0.77
KTN1-213ENST00000554306 NBPF14Q5TI25 921 aa10.24□□□□□ -0.77
KTN1-213ENST00000554306 FOXJ1Q92949 421 aa10.24□□□□□ -0.77
KTN1-213ENST00000554306 KIF14Q15058 1648 aa10.24□□□□□ -0.77
KTN1-213ENST00000554306 ASXL2Q76L83 1435 aa10.24□□□□□ -0.77
KTN1-213ENST00000554306 WDR7Q9Y4E6 1490 aa10.23□□□□□ -0.77
KTN1-213ENST00000554306 KIFC2Q96AC6 838 aa10.23□□□□□ -0.77
KTN1-213ENST00000554306 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.23□□□□□ -0.77
KTN1-213ENST00000554306 MAPKBP1O60336 1514 aa10.23□□□□□ -0.77
KTN1-213ENST00000554306 MAGI3Q5TCQ9 1506 aa10.23□□□□□ -0.77
KTN1-213ENST00000554306 CAPN5O15484 640 aaPredicted RBP10.22□□□□□ -0.77
KTN1-213ENST00000554306 CTDSPL2Q05D32 466 aa10.21□□□□□ -0.77
KTN1-213ENST00000554306 NNTQ13423 1086 aa10.21□□□□□ -0.77
KTN1-213ENST00000554306 PPP2R2DQ66LE6 453 aa10.21□□□□□ -0.77
KTN1-213ENST00000554306 GPKOWQ92917 476 aaPredicted RBP eCLIP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms