RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 AMOTL2Q9Y2J4 779 aa13.75□□□□□ -0.21
TTC8-208ENST00000553718 KIF24Q5T7B8 1368 aa13.74□□□□□ -0.21
TTC8-208ENST00000553718 FER1L4A9Z1Z3 1794 aa13.74□□□□□ -0.21
TTC8-208ENST00000553718 ACEP12821 1306 aa13.74□□□□□ -0.21
TTC8-208ENST00000553718 IGHDP01880 384 aa13.74□□□□□ -0.21
TTC8-208ENST00000553718 SENP3Q9H4L4 574 aaPredicted RBP13.74□□□□□ -0.21
TTC8-208ENST00000553718 SMC4Q9NTJ3 1288 aa13.74□□□□□ -0.21
TTC8-208ENST00000553718 HDAC1Q13547 482 aaPredicted RBP13.73□□□□□ -0.21
TTC8-208ENST00000553718 EMILIN1Q9Y6C2 1016 aa13.73□□□□□ -0.21
TTC8-208ENST00000553718 RIMS1Q86UR5 1692 aaKnown RBP13.72□□□□□ -0.21
TTC8-208ENST00000553718 C8orf34Q49A92 452 aa13.72□□□□□ -0.21
TTC8-208ENST00000553718 FTSJ3Q8IY81 847 aaKnown RBP13.72□□□□□ -0.21
TTC8-208ENST00000553718 SSH1Q8WYL5 1049 aa13.72□□□□□ -0.21
TTC8-208ENST00000553718 CFAP44Q96MT7 982 aa13.72□□□□□ -0.21
TTC8-208ENST00000553718 NALCNQ8IZF0 1738 aa13.71□□□□□ -0.21
TTC8-208ENST00000553718 RLBP1P12271 317 aa13.71□□□□□ -0.21
TTC8-208ENST00000553718 CEBPAP49715 358 aaPredicted RBP13.71□□□□□ -0.21
TTC8-208ENST00000553718 TSR2Q969E8 191 aaKnown RBP13.71□□□□□ -0.21
TTC8-208ENST00000553718 XRN1Q8IZH2 1706 aaKnown RBP13.7□□□□□ -0.22
TTC8-208ENST00000553718 PPM1GO15355 546 aaPredicted RBP13.7□□□□□ -0.22
TTC8-208ENST00000553718 VAMP4O75379 141 aa13.7□□□□□ -0.22
TTC8-208ENST00000553718 PCDHB15Q9Y5E8 787 aa13.7□□□□□ -0.22
TTC8-208ENST00000553718 TRIM27P14373 513 aa13.69□□□□□ -0.22
TTC8-208ENST00000553718 PLPPR3Q6T4P5 718 aa13.69□□□□□ -0.22
TTC8-208ENST00000553718 PHACTR3Q96KR7 559 aa13.69□□□□□ -0.22
TTC8-208ENST00000553718 NOB1Q9ULX3 412 aaKnown RBP13.69□□□□□ -0.22
TTC8-208ENST00000553718 SLC26A8Q96RN1 970 aa13.68□□□□□ -0.22
TTC8-208ENST00000553718 ARHGEF10O15013 1369 aa13.68□□□□□ -0.22
TTC8-208ENST00000553718 USP54Q70EL1 1684 aa13.67□□□□□ -0.22
TTC8-208ENST00000553718 HMOX1P09601 288 aa13.67□□□□□ -0.22
TTC8-208ENST00000553718 EIF4A2Q14240 407 aaKnown RBP13.67□□□□□ -0.22
TTC8-208ENST00000553718 ZRANB1Q9UGI0 708 aa13.67□□□□□ -0.22
TTC8-208ENST00000553718 SBNO1A3KN83 1393 aa13.67□□□□□ -0.22
TTC8-208ENST00000553718 NCKAP5LQ9HCH0 1330 aa13.66□□□□□ -0.22
TTC8-208ENST00000553718 HTATSF1O43719 755 aaKnown RBP13.66□□□□□ -0.22
TTC8-208ENST00000553718 SMC5Q8IY18 1101 aa13.66□□□□□ -0.22
TTC8-208ENST00000553718 MRPL50Q8N5N7 158 aaKnown RBP13.66□□□□□ -0.22
TTC8-208ENST00000553718 BCL2L13Q9BXK5 485 aa13.66□□□□□ -0.22
TTC8-208ENST00000553718 ZBTB40Q9NUA8 1239 aa13.66□□□□□ -0.22
TTC8-208ENST00000553718 KIAA0232Q92628 1395 aa13.66□□□□□ -0.22
TTC8-208ENST00000553718 CEP170BQ9Y4F5 1589 aaPredicted RBP13.66□□□□□ -0.22
TTC8-208ENST00000553718 FBLN1P23142 703 aa13.65□□□□□ -0.22
TTC8-208ENST00000553718 RGS3P49796 1198 aa13.65□□□□□ -0.22
TTC8-208ENST00000553718 RRS1Q15050 365 aaKnown RBP13.65□□□□□ -0.22
TTC8-208ENST00000553718 ANKLE2Q86XL3 938 aa13.65□□□□□ -0.22
TTC8-208ENST00000553718 API5Q9BZZ5 524 aaKnown RBP13.65□□□□□ -0.22
TTC8-208ENST00000553718 USP35Q9P2H5 1018 aa13.65□□□□□ -0.22
TTC8-208ENST00000553718 PDZRN3Q9UPQ7 1066 aa13.65□□□□□ -0.22
TTC8-208ENST00000553718 FLT4P35916 1363 aa13.65□□□□□ -0.22
TTC8-208ENST00000553718 LMTK3Q96Q04 1460 aa13.65□□□□□ -0.22
TTC8-208ENST00000553718 RGPD1P0DJD0 1748 aa13.64□□□□□ -0.23
TTC8-208ENST00000553718 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
TTC8-208ENST00000553718 NGDNQ8NEJ9 315 aaKnown RBP13.64□□□□□ -0.23
TTC8-208ENST00000553718 KDRP35968 1356 aa13.63□□□□□ -0.23
TTC8-208ENST00000553718 CHL1O00533 1208 aa13.63□□□□□ -0.23
TTC8-208ENST00000553718 TMEM57Q8N5G2 664 aa13.63□□□□□ -0.23
TTC8-208ENST00000553718 MBIPQ9NS73 344 aa13.63□□□□□ -0.23
TTC8-208ENST00000553718 TNNQ9UQP3 1299 aa13.63□□□□□ -0.23
TTC8-208ENST00000553718 SOS1Q07889 1333 aaPredicted RBP13.63□□□□□ -0.23
TTC8-208ENST00000553718 ZNF142P52746 1687 aaPredicted RBP13.63□□□□□ -0.23
TTC8-208ENST00000553718 TWISTNBQ3B726 338 aaPredicted RBP13.62□□□□□ -0.23
TTC8-208ENST00000553718 SULT6B1Q6IMI4 303 aa13.62□□□□□ -0.23
TTC8-208ENST00000553718 ITPRIPQ8IWB1 547 aa13.62□□□□□ -0.23
TTC8-208ENST00000553718 BABAM1Q9NWV8 329 aa13.62□□□□□ -0.23
TTC8-208ENST00000553718 VIRMAQ69YN4 1812 aaKnown RBP13.62□□□□□ -0.23
TTC8-208ENST00000553718 FMN2Q9NZ56 1722 aa13.61□□□□□ -0.23
TTC8-208ENST00000553718 ZBTB7BO15156 539 aaPredicted RBP13.61□□□□□ -0.23
TTC8-208ENST00000553718 NPM2Q86SE8 214 aaKnown RBP13.61□□□□□ -0.23
TTC8-208ENST00000553718 GCC1Q96CN9 775 aa13.61□□□□□ -0.23
TTC8-208ENST00000553718 ABCC4O15439 1325 aa13.61□□□□□ -0.23
TTC8-208ENST00000553718 MAP3K19Q56UN5 1328 aa13.61□□□□□ -0.23
TTC8-208ENST00000553718 EIF5BO60841 1220 aaKnown RBP13.6□□□□□ -0.23
TTC8-208ENST00000553718 GAS2L2Q8NHY3 880 aa13.6□□□□□ -0.23
TTC8-208ENST00000553718 IGSF1Q8N6C5 1336 aa13.6□□□□□ -0.23
TTC8-208ENST00000553718 SETD1BQ9UPS6 1966 aaKnown RBP13.6□□□□□ -0.23
TTC8-208ENST00000553718 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
TTC8-208ENST00000553718 DLG5Q8TDM6 1919 aa13.59□□□□□ -0.23
TTC8-208ENST00000553718 KCNA6P17658 529 aa13.59□□□□□ -0.23
TTC8-208ENST00000553718 SKAP1Q86WV1 359 aa13.59□□□□□ -0.23
TTC8-208ENST00000553718 UPF2Q9HAU5 1272 aaKnown RBP13.59□□□□□ -0.23
TTC8-208ENST00000553718 LAS1LQ9Y4W2 734 aaKnown RBP13.59□□□□□ -0.23
TTC8-208ENST00000553718 CHD2O14647 1828 aaKnown RBP13.59□□□□□ -0.23
TTC8-208ENST00000553718 PEAK1Q9H792 1746 aa13.59□□□□□ -0.23
TTC8-208ENST00000553718 HSP90AB2PQ58FF8 381 aa13.58□□□□□ -0.24
TTC8-208ENST00000553718 DAXXQ9UER7 740 aaPredicted RBP13.58□□□□□ -0.24
TTC8-208ENST00000553718 ADAMTSL3P82987 1691 aa13.58□□□□□ -0.24
TTC8-208ENST00000553718 PTPRCP08575 1304 aa13.58□□□□□ -0.24
TTC8-208ENST00000553718 AMPHP49418 695 aa13.57□□□□□ -0.24
TTC8-208ENST00000553718 INTS3Q68E01 1043 aaKnown RBP13.57□□□□□ -0.24
TTC8-208ENST00000553718 TSPYL6Q8N831 410 aa13.57□□□□□ -0.24
TTC8-208ENST00000553718 CRB1P82279 1406 aa13.56□□□□□ -0.24
TTC8-208ENST00000553718 NUCB1Q02818 461 aa13.56□□□□□ -0.24
TTC8-208ENST00000553718 C8orf58Q8NAV2 365 aa13.56□□□□□ -0.24
TTC8-208ENST00000553718 USP19O94966 1318 aa13.56□□□□□ -0.24
TTC8-208ENST00000553718 NLRP6P59044 892 aa13.55□□□□□ -0.24
TTC8-208ENST00000553718 BECN1Q14457 450 aa13.55□□□□□ -0.24
TTC8-208ENST00000553718 RTF1Q92541 710 aaKnown RBP13.55□□□□□ -0.24
TTC8-208ENST00000553718 THUMPD2Q9BTF0 503 aaKnown RBP13.55□□□□□ -0.24
TTC8-208ENST00000553718 CHMP4AQ9BY43 222 aa13.55□□□□□ -0.24
TTC8-208ENST00000553718 PHF8Q9UPP1 1060 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms