RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 PDGFDQ9GZP0 370 aaPredicted RBP6.54□□□□□ -1.36
PFDN5-219ENST00000553171 MTMR7Q9Y216 660 aa6.54□□□□□ -1.36
PFDN5-219ENST00000553171 ADCY9O60503 1353 aa6.54□□□□□ -1.36
PFDN5-219ENST00000553171 CASZ1Q86V15 1759 aa6.54□□□□□ -1.36
PFDN5-219ENST00000553171 MARF1Q9Y4F3 1742 aaKnown RBP6.53□□□□□ -1.36
PFDN5-219ENST00000553171 TOMM70O94826 608 aa6.53□□□□□ -1.36
PFDN5-219ENST00000553171 POTEJP0CG39 1038 aa6.53□□□□□ -1.36
PFDN5-219ENST00000553171 HSP90AB4PQ58FF6 505 aa6.53□□□□□ -1.36
PFDN5-219ENST00000553171 TBX22Q9Y458 520 aa6.53□□□□□ -1.36
PFDN5-219ENST00000553171 LAMC1P11047 1609 aa6.53□□□□□ -1.36
PFDN5-219ENST00000553171 PITPNM2Q9BZ72 1349 aa6.52□□□□□ -1.37
PFDN5-219ENST00000553171 MKRN4PQ13434 485 aaPredicted RBP6.52□□□□□ -1.37
PFDN5-219ENST00000553171 CUL9Q8IWT3 2517 aa6.52□□□□□ -1.37
PFDN5-219ENST00000553171 KIAA1107Q9UPP5 1409 aa6.51□□□□□ -1.37
PFDN5-219ENST00000553171 PREX2Q70Z35 1606 aa6.51□□□□□ -1.37
PFDN5-219ENST00000553171 E9PSI1 815 aa6.51□□□□□ -1.37
PFDN5-219ENST00000553171 GTF2E1P29083 439 aaPredicted RBP6.51□□□□□ -1.37
PFDN5-219ENST00000553171 BRPF1P55201 1214 aaPredicted RBP6.51□□□□□ -1.37
PFDN5-219ENST00000553171 AXDND1Q5T1B0 1012 aaPredicted RBP6.51□□□□□ -1.37
PFDN5-219ENST00000553171 FAM196AQ6ZSG2 479 aa6.51□□□□□ -1.37
PFDN5-219ENST00000553171 ANP32BQ92688 251 aaKnown RBP6.51□□□□□ -1.37
PFDN5-219ENST00000553171 ABHD8Q96I13 439 aa6.51□□□□□ -1.37
PFDN5-219ENST00000553171 GOLGB1Q14789 3259 aaKnown RBP6.51□□□□□ -1.37
PFDN5-219ENST00000553171 SYCP2Q9BX26 1530 aa6.5□□□□□ -1.37
PFDN5-219ENST00000553171 A0A0G2JS52 829 aa6.5□□□□□ -1.37
PFDN5-219ENST00000553171 DLL1O00548 723 aa6.5□□□□□ -1.37
PFDN5-219ENST00000553171 FAM98CQ17RN3 349 aaKnown RBP6.5□□□□□ -1.37
PFDN5-219ENST00000553171 FAM43BQ6ZT52 329 aaPredicted RBP6.5□□□□□ -1.37
PFDN5-219ENST00000553171 EXOC8Q8IYI6 725 aa6.5□□□□□ -1.37
PFDN5-219ENST00000553171 ZNF428Q96B54 188 aa6.5□□□□□ -1.37
PFDN5-219ENST00000553171 MTFR1LQ9H019 292 aa6.5□□□□□ -1.37
PFDN5-219ENST00000553171 TMEM131LA2VDJ0 1609 aa6.5□□□□□ -1.37
PFDN5-219ENST00000553171 RRP9O43818 475 aaKnown RBP6.49□□□□□ -1.37
PFDN5-219ENST00000553171 C1orf115Q9H7X2 142 aa6.49□□□□□ -1.37
PFDN5-219ENST00000553171 FOXD4L1Q9NU39 408 aa6.49□□□□□ -1.37
PFDN5-219ENST00000553171 KCNG1Q9UIX4 513 aa6.49□□□□□ -1.37
PFDN5-219ENST00000553171 STAG3Q9UJ98 1225 aa6.49□□□□□ -1.37
PFDN5-219ENST00000553171 ZNF777Q9ULD5 760 aaPredicted RBP6.49□□□□□ -1.37
PFDN5-219ENST00000553171 EFCAB6Q5THR3 1501 aa6.49□□□□□ -1.37
PFDN5-219ENST00000553171 ABCC5O15440 1437 aa6.49□□□□□ -1.37
PFDN5-219ENST00000553171 CLIP1P30622 1438 aa6.49□□□□□ -1.37
PFDN5-219ENST00000553171 CROCC2H7BZ55 1655 aa6.49□□□□□ -1.37
PFDN5-219ENST00000553171 PRXQ9BXM0 1461 aa6.48□□□□□ -1.37
PFDN5-219ENST00000553171 TNRC18O15417 2968 aaPredicted RBP6.48□□□□□ -1.37
PFDN5-219ENST00000553171 YBX3P16989 372 aaKnown RBP eCLIP6.48□□□□□ -1.37
PFDN5-219ENST00000553171 OS9Q13438 667 aaPredicted RBP6.48□□□□□ -1.37
PFDN5-219ENST00000553171 ADGRB3O60242 1522 aa6.48□□□□□ -1.37
PFDN5-219ENST00000553171 RPRD2Q5VT52 1461 aaKnown RBP6.47□□□□□ -1.37
PFDN5-219ENST00000553171 PIK3R4Q99570 1358 aa6.47□□□□□ -1.37
PFDN5-219ENST00000553171 PLEKHG1Q9ULL1 1385 aa6.47□□□□□ -1.37
PFDN5-219ENST00000553171 FOXD4L5Q5VV16 416 aaPredicted RBP6.47□□□□□ -1.37
PFDN5-219ENST00000553171 RBM46Q8TBY0 533 aaKnown RBP6.47□□□□□ -1.37
PFDN5-219ENST00000553171 FOXD4L4Q8WXT5 416 aaPredicted RBP6.47□□□□□ -1.37
PFDN5-219ENST00000553171 STAC3Q96MF2 364 aa6.47□□□□□ -1.37
PFDN5-219ENST00000553171 PATL2C9JE40 543 aaKnown RBP6.46□□□□□ -1.38
PFDN5-219ENST00000553171 MMP14P50281 582 aa6.46□□□□□ -1.38
PFDN5-219ENST00000553171 TMCO4Q5TGY1 634 aa6.46□□□□□ -1.38
PFDN5-219ENST00000553171 FAM163AQ96GL9 167 aaPredicted RBP6.46□□□□□ -1.38
PFDN5-219ENST00000553171 C1orf167Q5SNV9 1468 aa6.46□□□□□ -1.38
PFDN5-219ENST00000553171 NEXMIFQ5QGS0 1516 aa6.45□□□□□ -1.38
PFDN5-219ENST00000553171 ADGRL3Q9HAR2 1447 aa6.45□□□□□ -1.38
PFDN5-219ENST00000553171 CALD1Q05682 793 aaKnown RBP6.45□□□□□ -1.38
PFDN5-219ENST00000553171 FSTL1Q12841 308 aa6.45□□□□□ -1.38
PFDN5-219ENST00000553171 IDI1Q13907 227 aa6.45□□□□□ -1.38
PFDN5-219ENST00000553171 TRIM44Q96DX7 344 aaPredicted RBP6.45□□□□□ -1.38
PFDN5-219ENST00000553171 AMOTL2Q9Y2J4 779 aa6.45□□□□□ -1.38
PFDN5-219ENST00000553171 PIK3C2BO00750 1634 aa6.45□□□□□ -1.38
PFDN5-219ENST00000553171 PLEKHH2Q8IVE3 1493 aa6.45□□□□□ -1.38
PFDN5-219ENST00000553171 CFAP65Q6ZU64 1925 aaKnown RBP6.44□□□□□ -1.38
PFDN5-219ENST00000553171 PLSCR1O15162 318 aa6.44□□□□□ -1.38
PFDN5-219ENST00000553171 KDM4AO75164 1064 aa6.44□□□□□ -1.38
PFDN5-219ENST00000553171 PRPF38BQ5VTL8 546 aaKnown RBP6.44□□□□□ -1.38
PFDN5-219ENST00000553171 DIEXFQ68CQ4 756 aaKnown RBP6.44□□□□□ -1.38
PFDN5-219ENST00000553171 CEP120Q8N960 986 aa6.44□□□□□ -1.38
PFDN5-219ENST00000553171 SPRYD3Q8NCJ5 442 aa6.44□□□□□ -1.38
PFDN5-219ENST00000553171 CCER1Q8TC90 406 aaPredicted RBP6.44□□□□□ -1.38
PFDN5-219ENST00000553171 ORAI2Q96SN7 254 aa6.44□□□□□ -1.38
PFDN5-219ENST00000553171 NOS1P29475 1434 aa6.43□□□□□ -1.38
PFDN5-219ENST00000553171 CCDC85CA6NKD9 419 aa6.43□□□□□ -1.38
PFDN5-219ENST00000553171 CHGAP10645 457 aaKnown RBP6.43□□□□□ -1.38
PFDN5-219ENST00000553171 MFAP1P55081 439 aaKnown RBP6.43□□□□□ -1.38
PFDN5-219ENST00000553171 ARHGAP31Q2M1Z3 1444 aa6.42□□□□□ -1.38
PFDN5-219ENST00000553171 LOC102724159A0A0B4J2E5 919 aa6.42□□□□□ -1.38
PFDN5-219ENST00000553171 C11orf95C9JLR9 678 aaPredicted RBP6.42□□□□□ -1.38
PFDN5-219ENST00000553171 FOXN1O15353 648 aa6.42□□□□□ -1.38
PFDN5-219ENST00000553171 PWP2Q15269 919 aaKnown RBP6.42□□□□□ -1.38
PFDN5-219ENST00000553171 TMTC2Q8N394 836 aa6.42□□□□□ -1.38
PFDN5-219ENST00000553171 NLGN2Q8NFZ4 835 aa6.42□□□□□ -1.38
PFDN5-219ENST00000553171 CDC42BPAQ5VT25 1732 aa6.42□□□□□ -1.38
PFDN5-219ENST00000553171 NWD2Q9ULI1 1742 aa6.42□□□□□ -1.38
PFDN5-219ENST00000553171 EEA1Q15075 1411 aa6.42□□□□□ -1.38
PFDN5-219ENST00000553171 ADAMTS13Q76LX8 1427 aa6.42□□□□□ -1.38
PFDN5-219ENST00000553171 TRPM2O94759 1503 aa6.41□□□□□ -1.38
PFDN5-219ENST00000553171 USP32Q8NFA0 1604 aa6.41□□□□□ -1.38
PFDN5-219ENST00000553171 MPNDQ8N594 471 aa6.41□□□□□ -1.38
PFDN5-219ENST00000553171 TRAIPQ9BWF2 469 aa6.41□□□□□ -1.38
PFDN5-219ENST00000553171 LAS1LQ9Y4W2 734 aaKnown RBP6.41□□□□□ -1.38
PFDN5-219ENST00000553171 PTPRUQ92729 1446 aa6.41□□□□□ -1.38
PFDN5-219ENST00000553171 THSD7AQ9UPZ6 1657 aa6.4□□□□□ -1.38
PFDN5-219ENST00000553171 TTC36A6NLP5 189 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms