RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 USP31Q70CQ4 1352 aa10.73□□□□□ -0.69
RAB5B-210ENST00000553116 ATF3P18847 181 aa10.73□□□□□ -0.69
RAB5B-210ENST00000553116 LAS1LQ9Y4W2 734 aaKnown RBP10.73□□□□□ -0.69
RAB5B-210ENST00000553116 FOXO3O43524 673 aa10.72□□□□□ -0.69
RAB5B-210ENST00000553116 SULT6B1Q6IMI4 303 aa10.72□□□□□ -0.69
RAB5B-210ENST00000553116 ORAI2Q96SN7 254 aa10.72□□□□□ -0.69
RAB5B-210ENST00000553116 PHF23Q9BUL5 403 aaPredicted RBP10.72□□□□□ -0.69
RAB5B-210ENST00000553116 TSR2Q969E8 191 aaKnown RBP10.72□□□□□ -0.69
RAB5B-210ENST00000553116 FLT4P35916 1363 aa10.72□□□□□ -0.69
RAB5B-210ENST00000553116 BCAR3O75815 825 aa10.71□□□□□ -0.69
RAB5B-210ENST00000553116 PHACTR3Q96KR7 559 aa10.71□□□□□ -0.69
RAB5B-210ENST00000553116 CRBNQ96SW2 442 aa10.71□□□□□ -0.69
RAB5B-210ENST00000553116 C19orf44Q9H6X5 657 aa10.71□□□□□ -0.69
RAB5B-210ENST00000553116 KDM4FA0A1W2PPD8 638 aa10.71□□□□□ -0.69
RAB5B-210ENST00000553116 NFE2L2Q16236 605 aa10.71□□□□□ -0.69
RAB5B-210ENST00000553116 NCBP3Q53F19 620 aaKnown RBP10.71□□□□□ -0.69
RAB5B-210ENST00000553116 TSHZ2Q9NRE2 1034 aa10.71□□□□□ -0.69
RAB5B-210ENST00000553116 TRIM35Q9UPQ4 493 aa10.71□□□□□ -0.69
RAB5B-210ENST00000553116 SBNO1A3KN83 1393 aa10.71□□□□□ -0.7
RAB5B-210ENST00000553116 TMEM94Q12767 1356 aa10.71□□□□□ -0.7
RAB5B-210ENST00000553116 PEAK1Q9H792 1746 aa10.71□□□□□ -0.7
RAB5B-210ENST00000553116 C20orf194Q5TEA3 1177 aa10.7□□□□□ -0.7
RAB5B-210ENST00000553116 AEBP1Q8IUX7 1158 aa10.7□□□□□ -0.7
RAB5B-210ENST00000553116 FRAT1Q92837 279 aaPredicted RBP10.7□□□□□ -0.7
RAB5B-210ENST00000553116 LTV1Q96GA3 475 aaPredicted RBP10.7□□□□□ -0.7
RAB5B-210ENST00000553116 FANCIQ9NVI1 1328 aa10.7□□□□□ -0.7
RAB5B-210ENST00000553116 BCL2L13Q9BXK5 485 aa10.69□□□□□ -0.7
RAB5B-210ENST00000553116 LMOD3Q0VAK6 560 aa10.69□□□□□ -0.7
RAB5B-210ENST00000553116 CALD1Q05682 793 aaKnown RBP10.68□□□□□ -0.7
RAB5B-210ENST00000553116 THUMPD2Q9BTF0 503 aaKnown RBP10.68□□□□□ -0.7
RAB5B-210ENST00000553116 EXOSC9Q06265 439 aaKnown RBP10.68□□□□□ -0.7
RAB5B-210ENST00000553116 DLG5Q8TDM6 1919 aa10.67□□□□□ -0.7
RAB5B-210ENST00000553116 IL16Q14005 1332 aa10.67□□□□□ -0.7
RAB5B-210ENST00000553116 STRCP1A6NGW2 1772 aa10.67□□□□□ -0.7
RAB5B-210ENST00000553116 C1orf167Q5SNV9 1468 aa10.67□□□□□ -0.7
RAB5B-210ENST00000553116 MSH6P52701 1360 aa10.67□□□□□ -0.7
RAB5B-210ENST00000553116 HOXC9P31274 260 aa10.66□□□□□ -0.7
RAB5B-210ENST00000553116 RARSP54136 660 aaKnown RBP10.66□□□□□ -0.7
RAB5B-210ENST00000553116 KRT28Q7Z3Y7 464 aa10.66□□□□□ -0.7
RAB5B-210ENST00000553116 LMTK3Q96Q04 1460 aa10.66□□□□□ -0.7
RAB5B-210ENST00000553116 LTN1O94822 1766 aa10.66□□□□□ -0.7
RAB5B-210ENST00000553116 CADPS2Q86UW7 1296 aa10.66□□□□□ -0.7
RAB5B-210ENST00000553116 KCNH5Q8NCM2 988 aa10.66□□□□□ -0.7
RAB5B-210ENST00000553116 ANO8Q9HCE9 1232 aaPredicted RBP10.66□□□□□ -0.7
RAB5B-210ENST00000553116 SMC4Q9NTJ3 1288 aa10.66□□□□□ -0.7
RAB5B-210ENST00000553116 MARF1Q9Y4F3 1742 aaKnown RBP10.65□□□□□ -0.7
RAB5B-210ENST00000553116 KIF1AQ12756 1690 aa10.65□□□□□ -0.7
RAB5B-210ENST00000553116 ARHGEF10O15013 1369 aa10.65□□□□□ -0.7
RAB5B-210ENST00000553116 FAM83GA6ND36 823 aa10.65□□□□□ -0.7
RAB5B-210ENST00000553116 DCTN1Q14203 1278 aa10.65□□□□□ -0.7
RAB5B-210ENST00000553116 GNAI1P63096 354 aa10.64□□□□□ -0.71
RAB5B-210ENST00000553116 EYA1Q99502 592 aa10.64□□□□□ -0.71
RAB5B-210ENST00000553116 USP54Q70EL1 1684 aa10.64□□□□□ -0.71
RAB5B-210ENST00000553116 CT47B1P0C2W7 299 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-210ENST00000553116 KIF24Q5T7B8 1368 aa10.64□□□□□ -0.71
RAB5B-210ENST00000553116 FTSJ3Q8IY81 847 aaKnown RBP10.63□□□□□ -0.71
RAB5B-210ENST00000553116 PANK1Q8TE04 598 aa10.63□□□□□ -0.71
RAB5B-210ENST00000553116 RTF1Q92541 710 aaKnown RBP10.63□□□□□ -0.71
RAB5B-210ENST00000553116 DDX17Q92841 729 aaKnown RBP10.63□□□□□ -0.71
RAB5B-210ENST00000553116 CLUAP1Q96AJ1 413 aa10.63□□□□□ -0.71
RAB5B-210ENST00000553116 MST1RQ04912 1400 aa10.63□□□□□ -0.71
RAB5B-210ENST00000553116 RGPD1P0DJD0 1748 aa10.63□□□□□ -0.71
RAB5B-210ENST00000553116 RTL1A6NKG5 1358 aa10.63□□□□□ -0.71
RAB5B-210ENST00000553116 STRCQ7RTU9 1775 aa10.63□□□□□ -0.71
RAB5B-210ENST00000553116 DCCP43146 1447 aa10.63□□□□□ -0.71
RAB5B-210ENST00000553116 IFT57Q9NWB7 429 aa10.63□□□□□ -0.71
RAB5B-210ENST00000553116 COG6Q9Y2V7 657 aa10.63□□□□□ -0.71
RAB5B-210ENST00000553116 USHBP1Q8N6Y0 703 aa10.62□□□□□ -0.71
RAB5B-210ENST00000553116 IGSF1Q8N6C5 1336 aa10.62□□□□□ -0.71
RAB5B-210ENST00000553116 ZNF335Q9H4Z2 1342 aaPredicted RBP10.62□□□□□ -0.71
RAB5B-210ENST00000553116 GCP02774 474 aa10.62□□□□□ -0.71
RAB5B-210ENST00000553116 PDE3AQ14432 1141 aa10.62□□□□□ -0.71
RAB5B-210ENST00000553116 MCM10Q7L590 875 aa10.62□□□□□ -0.71
RAB5B-210ENST00000553116 NCOA3Q9Y6Q9 1424 aa10.62□□□□□ -0.71
RAB5B-210ENST00000553116 ELL2O00472 640 aaPredicted RBP10.61□□□□□ -0.71
RAB5B-210ENST00000553116 IP6K1Q92551 441 aa10.61□□□□□ -0.71
RAB5B-210ENST00000553116 NPHP3Q7Z494 1330 aa10.61□□□□□ -0.71
RAB5B-210ENST00000553116 ZKSCAN2Q63HK3 967 aa10.61□□□□□ -0.71
RAB5B-210ENST00000553116 GAS2L2Q8NHY3 880 aa10.61□□□□□ -0.71
RAB5B-210ENST00000553116 SSH1Q8WYL5 1049 aa10.61□□□□□ -0.71
RAB5B-210ENST00000553116 MBIPQ9NS73 344 aa10.61□□□□□ -0.71
RAB5B-210ENST00000553116 NFAT5O94916 1531 aa10.61□□□□□ -0.71
RAB5B-210ENST00000553116 MTHFSDQ2M296 383 aaKnown RBP10.6□□□□□ -0.71
RAB5B-210ENST00000553116 CFAP44Q96MT7 982 aa10.6□□□□□ -0.71
RAB5B-210ENST00000553116 TRPM3Q9HCF6 1732 aaPredicted RBP10.6□□□□□ -0.71
RAB5B-210ENST00000553116 KDRP35968 1356 aa10.6□□□□□ -0.71
RAB5B-210ENST00000553116 ZC3H6P61129 1189 aaKnown RBP10.6□□□□□ -0.71
RAB5B-210ENST00000553116 MS4A1P11836 297 aa10.59□□□□□ -0.71
RAB5B-210ENST00000553116 TNNQ9UQP3 1299 aa10.59□□□□□ -0.71
RAB5B-210ENST00000553116 KIF16BQ96L93 1317 aa10.59□□□□□ -0.71
RAB5B-210ENST00000553116 DZIP1LQ8IYY4 767 aaKnown RBP10.58□□□□□ -0.72
RAB5B-210ENST00000553116 TCERG1O14776 1098 aaKnown RBP10.58□□□□□ -0.72
RAB5B-210ENST00000553116 TWISTNBQ3B726 338 aaPredicted RBP10.58□□□□□ -0.72
RAB5B-210ENST00000553116 XIRP1Q702N8 1843 aaKnown RBP10.58□□□□□ -0.72
RAB5B-210ENST00000553116 LRRC59Q96AG4 307 aaKnown RBP10.58□□□□□ -0.72
RAB5B-210ENST00000553116 NOB1Q9ULX3 412 aaKnown RBP10.58□□□□□ -0.72
RAB5B-210ENST00000553116 IPO8O15397 1037 aaKnown RBP10.57□□□□□ -0.72
RAB5B-210ENST00000553116 ARHGEF25Q86VW2 580 aa10.57□□□□□ -0.72
RAB5B-210ENST00000553116 ZNF853P0CG23 659 aa10.57□□□□□ -0.72
RAB5B-210ENST00000553116 RLBP1P12271 317 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms