RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 AMPHP49418 695 aa16.68■□□□□ 0.26
CACNB3-223ENST00000552480 SLFN5Q08AF3 891 aa16.68■□□□□ 0.26
CACNB3-223ENST00000552480 WWC1Q8IX03 1113 aa16.68■□□□□ 0.26
CACNB3-223ENST00000552480 ARHGEF10O15013 1369 aa16.67■□□□□ 0.26
CACNB3-223ENST00000552480 E9PSI1 815 aa16.67■□□□□ 0.26
CACNB3-223ENST00000552480 NEFMP07197 916 aa16.67■□□□□ 0.26
CACNB3-223ENST00000552480 PRKAR2BP31323 418 aa16.67■□□□□ 0.26
CACNB3-223ENST00000552480 HSP90AB2PQ58FF8 381 aa16.67■□□□□ 0.26
CACNB3-223ENST00000552480 RRP7AQ9Y3A4 280 aaKnown RBP16.67■□□□□ 0.26
CACNB3-223ENST00000552480 TMPOP42166 694 aaKnown RBP16.66■□□□□ 0.26
CACNB3-223ENST00000552480 DUSP27Q5VZP5 1158 aa16.66■□□□□ 0.26
CACNB3-223ENST00000552480 TNS3Q68CZ2 1445 aa16.66■□□□□ 0.26
CACNB3-223ENST00000552480 WDR63Q8IWG1 891 aa16.66■□□□□ 0.26
CACNB3-223ENST00000552480 TRMT2AQ8IZ69 625 aaKnown RBP16.66■□□□□ 0.26
CACNB3-223ENST00000552480 HMOX1P09601 288 aa16.65■□□□□ 0.26
CACNB3-223ENST00000552480 HOXC9P31274 260 aa16.65■□□□□ 0.26
CACNB3-223ENST00000552480 FKBP8Q14318 412 aa16.65■□□□□ 0.26
CACNB3-223ENST00000552480 NEUROD2Q15784 382 aa16.65■□□□□ 0.26
CACNB3-223ENST00000552480 BRINP3Q76B58 766 aa16.65■□□□□ 0.26
CACNB3-223ENST00000552480 RNF123Q5XPI4 1314 aa16.65■□□□□ 0.26
CACNB3-223ENST00000552480 SLAIN2Q9P270 581 aa16.64■□□□□ 0.25
CACNB3-223ENST00000552480 MED1Q15648 1581 aaPredicted RBP16.64■□□□□ 0.25
CACNB3-223ENST00000552480 LTBP4Q8N2S1 1624 aa16.63■□□□□ 0.25
CACNB3-223ENST00000552480 LMOD2Q6P5Q4 547 aa16.63■□□□□ 0.25
CACNB3-223ENST00000552480 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
CACNB3-223ENST00000552480 GCP02774 474 aa16.62■□□□□ 0.25
CACNB3-223ENST00000552480 NFE2L2Q16236 605 aa16.62■□□□□ 0.25
CACNB3-223ENST00000552480 IP6K1Q92551 441 aa16.62■□□□□ 0.25
CACNB3-223ENST00000552480 DDX17Q92841 729 aaKnown RBP16.62■□□□□ 0.25
CACNB3-223ENST00000552480 IGSF1Q8N6C5 1336 aa16.62■□□□□ 0.25
CACNB3-223ENST00000552480 CRYBG1Q9Y4K1 1723 aa16.62■□□□□ 0.25
CACNB3-223ENST00000552480 NHSL1Q5SYE7 1610 aa16.61■□□□□ 0.25
CACNB3-223ENST00000552480 RIPK4P57078 832 aa16.61■□□□□ 0.25
CACNB3-223ENST00000552480 SPINK5Q9NQ38 1064 aaPredicted RBP16.61■□□□□ 0.25
CACNB3-223ENST00000552480 TRIM35Q9UPQ4 493 aa16.61■□□□□ 0.25
CACNB3-223ENST00000552480 SPATA31A3Q5VYP0 1347 aa16.61■□□□□ 0.25
CACNB3-223ENST00000552480 SULT6B1Q6IMI4 303 aa16.6■□□□□ 0.25
CACNB3-223ENST00000552480 PHACTR3Q96KR7 559 aa16.6■□□□□ 0.25
CACNB3-223ENST00000552480 KDRP35968 1356 aa16.6■□□□□ 0.25
CACNB3-223ENST00000552480 ARHGEF25Q86VW2 580 aa16.59■□□□□ 0.25
CACNB3-223ENST00000552480 AEBP1Q8IUX7 1158 aa16.59■□□□□ 0.25
CACNB3-223ENST00000552480 IL16Q14005 1332 aa16.59■□□□□ 0.25
CACNB3-223ENST00000552480 ERICH6BQ5W0A0 696 aa16.58■□□□□ 0.24
CACNB3-223ENST00000552480 SOS2Q07890 1332 aaPredicted RBP16.58■□□□□ 0.24
CACNB3-223ENST00000552480 ABCC6O95255 1503 aa16.58■□□□□ 0.24
CACNB3-223ENST00000552480 EYA1Q99502 592 aa16.57■□□□□ 0.24
CACNB3-223ENST00000552480 MYH16Q9H6N6 1097 aa16.57■□□□□ 0.24
CACNB3-223ENST00000552480 RRP1P56182 461 aaKnown RBP16.56■□□□□ 0.24
CACNB3-223ENST00000552480 LMOD3Q0VAK6 560 aa16.56■□□□□ 0.24
CACNB3-223ENST00000552480 DLG5Q8TDM6 1919 aa16.56■□□□□ 0.24
CACNB3-223ENST00000552480 CAMTA1Q9Y6Y1 1673 aa16.55■□□□□ 0.24
CACNB3-223ENST00000552480 ZBTB7CA1YPR0 619 aa16.54■□□□□ 0.24
CACNB3-223ENST00000552480 IRX6P78412 446 aaPredicted RBP16.54■□□□□ 0.24
CACNB3-223ENST00000552480 CALD1Q05682 793 aaKnown RBP16.54■□□□□ 0.24
CACNB3-223ENST00000552480 LTV1Q96GA3 475 aaPredicted RBP16.53■□□□□ 0.24
CACNB3-223ENST00000552480 NCAPD2Q15021 1401 aa16.53■□□□□ 0.24
CACNB3-223ENST00000552480 COL18A1P39060 1754 aa16.52■□□□□ 0.24
CACNB3-223ENST00000552480 PLEKHG5O94827 1062 aa16.52■□□□□ 0.24
CACNB3-223ENST00000552480 ABCA3Q99758 1704 aa16.52■□□□□ 0.24
CACNB3-223ENST00000552480 ROBO1Q9Y6N7 1651 aa16.52■□□□□ 0.23
CACNB3-223ENST00000552480 AHDC1Q5TGY3 1603 aaPredicted RBP16.52■□□□□ 0.23
CACNB3-223ENST00000552480 CPDO75976 1380 aa16.51■□□□□ 0.23
CACNB3-223ENST00000552480 FANCIQ9NVI1 1328 aa16.5■□□□□ 0.23
CACNB3-223ENST00000552480 LMO7Q8WWI1 1683 aa16.5■□□□□ 0.23
CACNB3-223ENST00000552480 ZC3H6P61129 1189 aaKnown RBP16.5■□□□□ 0.23
CACNB3-223ENST00000552480 ANKRD24Q8TF21 1146 aa16.5■□□□□ 0.23
CACNB3-223ENST00000552480 RGPD2P0DJD1 1756 aa16.49■□□□□ 0.23
CACNB3-223ENST00000552480 RGPD5Q99666 1765 aa16.49■□□□□ 0.23
CACNB3-223ENST00000552480 CT47B1P0C2W7 299 aaPredicted RBP16.49■□□□□ 0.23
CACNB3-223ENST00000552480 GAS2L2Q8NHY3 880 aa16.49■□□□□ 0.23
CACNB3-223ENST00000552480 FAM208AQ9UK61 1670 aaKnown RBP16.49■□□□□ 0.23
CACNB3-223ENST00000552480 NBPF6Q5VWK0 638 aa16.48■□□□□ 0.23
CACNB3-223ENST00000552480 CABLES1Q8TDN4 633 aa16.48■□□□□ 0.23
CACNB3-223ENST00000552480 NBPF4Q96M43 638 aa16.48■□□□□ 0.23
CACNB3-223ENST00000552480 IFT57Q9NWB7 429 aa16.48■□□□□ 0.23
CACNB3-223ENST00000552480 GNAI1P63096 354 aa16.47■□□□□ 0.23
CACNB3-223ENST00000552480 MTHFSDQ2M296 383 aaKnown RBP16.47■□□□□ 0.23
CACNB3-223ENST00000552480 TSR2Q969E8 191 aaKnown RBP16.47■□□□□ 0.23
CACNB3-223ENST00000552480 AXIN2Q9Y2T1 843 aa16.47■□□□□ 0.23
CACNB3-223ENST00000552480 ERBB3P21860 1342 aa16.46■□□□□ 0.23
CACNB3-223ENST00000552480 LRRC37A3O60309 1634 aa16.46■□□□□ 0.23
CACNB3-223ENST00000552480 ZNF853P0CG23 659 aa16.46■□□□□ 0.23
CACNB3-223ENST00000552480 USHBP1Q8N6Y0 703 aa16.46■□□□□ 0.23
CACNB3-223ENST00000552480 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.46■□□□□ 0.23
CACNB3-223ENST00000552480 KIAA0232Q92628 1395 aa16.46■□□□□ 0.23
CACNB3-223ENST00000552480 FAM83GA6ND36 823 aa16.45■□□□□ 0.22
CACNB3-223ENST00000552480 HTATSF1O43719 755 aaKnown RBP16.45■□□□□ 0.22
CACNB3-223ENST00000552480 LRRC59Q96AG4 307 aaKnown RBP16.45■□□□□ 0.22
CACNB3-223ENST00000552480 THUMPD2Q9BTF0 503 aaKnown RBP16.45■□□□□ 0.22
CACNB3-223ENST00000552480 PPP4R2Q9NY27 417 aa16.45■□□□□ 0.22
CACNB3-223ENST00000552480 EXOSC9Q06265 439 aaKnown RBP16.44■□□□□ 0.22
CACNB3-223ENST00000552480 CFAP44Q96MT7 982 aa16.44■□□□□ 0.22
CACNB3-223ENST00000552480 COL22A1Q8NFW1 1626 aaPredicted RBP16.44■□□□□ 0.22
CACNB3-223ENST00000552480 MAP3K5Q99683 1374 aa16.43■□□□□ 0.22
CACNB3-223ENST00000552480 RARSP54136 660 aaKnown RBP16.43■□□□□ 0.22
CACNB3-223ENST00000552480 PLIN1O60240 522 aa16.42■□□□□ 0.22
CACNB3-223ENST00000552480 DCTN1Q14203 1278 aa16.42■□□□□ 0.22
CACNB3-223ENST00000552480 RTF1Q92541 710 aaKnown RBP16.42■□□□□ 0.22
CACNB3-223ENST00000552480 LAS1LQ9Y4W2 734 aaKnown RBP16.42■□□□□ 0.22
CACNB3-223ENST00000552480 CRB1P82279 1406 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms