RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 TNNQ9UQP3 1299 aa18.04■□□□□ 0.48
RAB3IP-216ENST00000552199 CALD1Q05682 793 aaKnown RBP18.03■□□□□ 0.48
RAB3IP-216ENST00000552199 EIF4A2Q14240 407 aaKnown RBP18.03■□□□□ 0.48
RAB3IP-216ENST00000552199 ZKSCAN2Q63HK3 967 aa18.03■□□□□ 0.48
RAB3IP-216ENST00000552199 PEAK1Q9H792 1746 aa18.03■□□□□ 0.48
RAB3IP-216ENST00000552199 BACH2Q9BYV9 841 aa18.02■□□□□ 0.48
RAB3IP-216ENST00000552199 DLG5Q8TDM6 1919 aa18.02■□□□□ 0.48
RAB3IP-216ENST00000552199 SMC4Q9NTJ3 1288 aa18.02■□□□□ 0.47
RAB3IP-216ENST00000552199 SSH1Q8WYL5 1049 aa18.01■□□□□ 0.47
RAB3IP-216ENST00000552199 IGHDP01880 384 aa18■□□□□ 0.47
RAB3IP-216ENST00000552199 LMOD3Q0VAK6 560 aa18■□□□□ 0.47
RAB3IP-216ENST00000552199 DZIP1LQ8IYY4 767 aaKnown RBP17.99■□□□□ 0.47
RAB3IP-216ENST00000552199 PIK3C2AO00443 1686 aa17.99■□□□□ 0.47
RAB3IP-216ENST00000552199 HSP90AB2PQ58FF8 381 aa17.98■□□□□ 0.47
RAB3IP-216ENST00000552199 THUMPD2Q9BTF0 503 aaKnown RBP17.98■□□□□ 0.47
RAB3IP-216ENST00000552199 IFT57Q9NWB7 429 aa17.98■□□□□ 0.47
RAB3IP-216ENST00000552199 LAS1LQ9Y4W2 734 aaKnown RBP17.98■□□□□ 0.47
RAB3IP-216ENST00000552199 RGPD1P0DJD0 1748 aa17.98■□□□□ 0.47
RAB3IP-216ENST00000552199 ZNF853P0CG23 659 aa17.98■□□□□ 0.47
RAB3IP-216ENST00000552199 GNAI1P63096 354 aa17.98■□□□□ 0.47
RAB3IP-216ENST00000552199 MVPQ14764 893 aaKnown RBP17.98■□□□□ 0.47
RAB3IP-216ENST00000552199 ALDH1L2Q3SY69 923 aa17.98■□□□□ 0.47
RAB3IP-216ENST00000552199 SULT6B1Q6IMI4 303 aa17.98■□□□□ 0.47
RAB3IP-216ENST00000552199 ZNF428Q96B54 188 aa17.97■□□□□ 0.47
RAB3IP-216ENST00000552199 MAP3K19Q56UN5 1328 aa17.97■□□□□ 0.47
RAB3IP-216ENST00000552199 AEBP1Q8IUX7 1158 aa17.96■□□□□ 0.47
RAB3IP-216ENST00000552199 FTSJ3Q8IY81 847 aaKnown RBP17.96■□□□□ 0.47
RAB3IP-216ENST00000552199 SOX12O15370 315 aa17.96■□□□□ 0.47
RAB3IP-216ENST00000552199 ANP32AP39687 249 aaKnown RBP17.96■□□□□ 0.47
RAB3IP-216ENST00000552199 ANP32EQ9BTT0 268 aa17.96■□□□□ 0.47
RAB3IP-216ENST00000552199 NOB1Q9ULX3 412 aaKnown RBP17.96■□□□□ 0.47
RAB3IP-216ENST00000552199 SBNO1A3KN83 1393 aa17.95■□□□□ 0.46
RAB3IP-216ENST00000552199 TRIM27P14373 513 aa17.95■□□□□ 0.46
RAB3IP-216ENST00000552199 ATF7IPQ6VMQ6 1270 aa17.95■□□□□ 0.46
RAB3IP-216ENST00000552199 USP54Q70EL1 1684 aa17.94■□□□□ 0.46
RAB3IP-216ENST00000552199 PCDHB15Q9Y5E8 787 aa17.94■□□□□ 0.46
RAB3IP-216ENST00000552199 KIF16BQ96L93 1317 aa17.94■□□□□ 0.46
RAB3IP-216ENST00000552199 FLT4P35916 1363 aa17.94■□□□□ 0.46
RAB3IP-216ENST00000552199 IPO8O15397 1037 aaKnown RBP17.94■□□□□ 0.46
RAB3IP-216ENST00000552199 BRPF1P55201 1214 aaPredicted RBP17.94■□□□□ 0.46
RAB3IP-216ENST00000552199 CFAP44Q96MT7 982 aa17.94■□□□□ 0.46
RAB3IP-216ENST00000552199 NPHP4O75161 1426 aaPredicted RBP17.93■□□□□ 0.46
RAB3IP-216ENST00000552199 VAMP4O75379 141 aa17.93■□□□□ 0.46
RAB3IP-216ENST00000552199 NLRP6P59044 892 aa17.93■□□□□ 0.46
RAB3IP-216ENST00000552199 MBIPQ9NS73 344 aa17.93■□□□□ 0.46
RAB3IP-216ENST00000552199 ARHGEF10O15013 1369 aa17.93■□□□□ 0.46
RAB3IP-216ENST00000552199 MARF1Q9Y4F3 1742 aaKnown RBP17.93■□□□□ 0.46
RAB3IP-216ENST00000552199 FAM83GA6ND36 823 aa17.92■□□□□ 0.46
RAB3IP-216ENST00000552199 PHF8Q9UPP1 1060 aa17.92■□□□□ 0.46
RAB3IP-216ENST00000552199 AMPHP49418 695 aa17.91■□□□□ 0.46
RAB3IP-216ENST00000552199 RGS3P49796 1198 aa17.9■□□□□ 0.46
RAB3IP-216ENST00000552199 IPO9Q96P70 1041 aaKnown RBP17.9■□□□□ 0.46
RAB3IP-216ENST00000552199 ADGRL3Q9HAR2 1447 aa17.9■□□□□ 0.46
RAB3IP-216ENST00000552199 DDX19BQ9UMR2 479 aa17.9■□□□□ 0.46
RAB3IP-216ENST00000552199 DCTN1Q14203 1278 aa17.9■□□□□ 0.46
RAB3IP-216ENST00000552199 TSPYL6Q8N831 410 aa17.9■□□□□ 0.46
RAB3IP-216ENST00000552199 RWDD1Q9H446 243 aaPredicted RBP17.9■□□□□ 0.46
RAB3IP-216ENST00000552199 FAM161AQ3B820 660 aa17.89■□□□□ 0.45
RAB3IP-216ENST00000552199 RBM33Q96EV2 1170 aaKnown RBP17.89■□□□□ 0.45
RAB3IP-216ENST00000552199 KIF24Q5T7B8 1368 aa17.88■□□□□ 0.45
RAB3IP-216ENST00000552199 MRPL50Q8N5N7 158 aaKnown RBP17.88■□□□□ 0.45
RAB3IP-216ENST00000552199 ABTB2Q8N961 1025 aa17.88■□□□□ 0.45
RAB3IP-216ENST00000552199 PAK3O75914 559 aaPredicted RBP17.88■□□□□ 0.45
RAB3IP-216ENST00000552199 ERICH6Q7L0X2 663 aa17.88■□□□□ 0.45
RAB3IP-216ENST00000552199 ITPRIPQ8IWB1 547 aa17.88■□□□□ 0.45
RAB3IP-216ENST00000552199 TMEM57Q8N5G2 664 aa17.88■□□□□ 0.45
RAB3IP-216ENST00000552199 KDRP35968 1356 aa17.87■□□□□ 0.45
RAB3IP-216ENST00000552199 TWISTNBQ3B726 338 aaPredicted RBP17.87■□□□□ 0.45
RAB3IP-216ENST00000552199 NUTM2GQ5VZR2 741 aa17.87■□□□□ 0.45
RAB3IP-216ENST00000552199 IGSF1Q8N6C5 1336 aa17.86■□□□□ 0.45
RAB3IP-216ENST00000552199 C8orf58Q8NAV2 365 aa17.86■□□□□ 0.45
RAB3IP-216ENST00000552199 ARHGAP45Q92619 1136 aa17.86■□□□□ 0.45
RAB3IP-216ENST00000552199 EYA1Q99502 592 aa17.86■□□□□ 0.45
RAB3IP-216ENST00000552199 C8orf34Q49A92 452 aa17.86■□□□□ 0.45
RAB3IP-216ENST00000552199 NPM2Q86SE8 214 aaKnown RBP17.86■□□□□ 0.45
RAB3IP-216ENST00000552199 ELL2O00472 640 aaPredicted RBP17.85■□□□□ 0.45
RAB3IP-216ENST00000552199 HOXC9P31274 260 aa17.85■□□□□ 0.45
RAB3IP-216ENST00000552199 NOP58Q9Y2X3 529 aaKnown RBP17.85■□□□□ 0.45
RAB3IP-216ENST00000552199 CHL1O00533 1208 aa17.84■□□□□ 0.45
RAB3IP-216ENST00000552199 NWD1Q149M9 1564 aa17.84■□□□□ 0.45
RAB3IP-216ENST00000552199 MCM10Q7L590 875 aa17.84■□□□□ 0.45
RAB3IP-216ENST00000552199 ESCO1Q5FWF5 840 aa17.83■□□□□ 0.44
RAB3IP-216ENST00000552199 ZBTB40Q9NUA8 1239 aa17.83■□□□□ 0.44
RAB3IP-216ENST00000552199 HDAC1Q13547 482 aaPredicted RBP17.82■□□□□ 0.44
RAB3IP-216ENST00000552199 MTHFSDQ2M296 383 aaKnown RBP17.82■□□□□ 0.44
RAB3IP-216ENST00000552199 C14orf37Q86TY3 774 aa17.82■□□□□ 0.44
RAB3IP-216ENST00000552199 PDZRN3Q9UPQ7 1066 aa17.82■□□□□ 0.44
RAB3IP-216ENST00000552199 PSME1Q06323 249 aa17.82■□□□□ 0.44
RAB3IP-216ENST00000552199 CRB1P82279 1406 aa17.81■□□□□ 0.44
RAB3IP-216ENST00000552199 RTL1A6NKG5 1358 aa17.8■□□□□ 0.44
RAB3IP-216ENST00000552199 ZBTB47Q9UFB7 747 aaPredicted RBP17.8■□□□□ 0.44
RAB3IP-216ENST00000552199 KIAA0232Q92628 1395 aa17.8■□□□□ 0.44
RAB3IP-216ENST00000552199 LTN1O94822 1766 aa17.8■□□□□ 0.44
RAB3IP-216ENST00000552199 FOXO3O43524 673 aa17.8■□□□□ 0.44
RAB3IP-216ENST00000552199 GAS2L2Q8NHY3 880 aa17.8■□□□□ 0.44
RAB3IP-216ENST00000552199 VIRMAQ69YN4 1812 aaKnown RBP17.8■□□□□ 0.44
RAB3IP-216ENST00000552199 HAP1P54257 671 aaPredicted RBP17.79■□□□□ 0.44
RAB3IP-216ENST00000552199 RTF1Q92541 710 aaKnown RBP17.79■□□□□ 0.44
RAB3IP-216ENST00000552199 ABCC4O15439 1325 aa17.78■□□□□ 0.44
RAB3IP-216ENST00000552199 NFAT5O94916 1531 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms