RNA–Protein interactions for RNA: ENST00000551964.5

APAF1-210, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene APAF1, Length 5,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-210ENST00000551964 CCDC184Q52MB2 194 aa22.98■■□□□ 1.27
APAF1-210ENST00000551964 CT47A1Q5JQC4 288 aaPredicted RBP22.98■■□□□ 1.27
APAF1-210ENST00000551964 RRP12Q5JTH9 1297 aaKnown RBP22.98■■□□□ 1.27
APAF1-210ENST00000551964 WDR33Q9C0J8 1336 aaKnown RBP22.98■■□□□ 1.27
APAF1-210ENST00000551964 GNL3LQ9NVN8 582 aaKnown RBP22.97■■□□□ 1.27
APAF1-210ENST00000551964 HSP90B2PQ58FF3 399 aa22.97■■□□□ 1.27
APAF1-210ENST00000551964 STRN4Q9NRL3 753 aa22.97■■□□□ 1.27
APAF1-210ENST00000551964 SIL1Q9H173 461 aa22.96■■□□□ 1.27
APAF1-210ENST00000551964 TXLNAP40222 546 aa22.96■■□□□ 1.27
APAF1-210ENST00000551964 FILIP1LQ4L180 1135 aa22.96■■□□□ 1.27
APAF1-210ENST00000551964 SLFN5Q08AF3 891 aa22.95■■□□□ 1.27
APAF1-210ENST00000551964 JMYQ8N9B5 988 aa22.95■■□□□ 1.27
APAF1-210ENST00000551964 NSD3Q9BZ95 1437 aa22.95■■□□□ 1.26
APAF1-210ENST00000551964 CCP110O43303 1012 aa22.95■■□□□ 1.26
APAF1-210ENST00000551964 IKQ13123 557 aaPredicted RBP22.95■■□□□ 1.26
APAF1-210ENST00000551964 NAIPQ13075 1403 aa22.94■■□□□ 1.26
APAF1-210ENST00000551964 CEBPZQ03701 1054 aaKnown RBP22.94■■□□□ 1.26
APAF1-210ENST00000551964 RRS1Q15050 365 aaKnown RBP22.94■■□□□ 1.26
APAF1-210ENST00000551964 NFE2L2Q16236 605 aa22.94■■□□□ 1.26
APAF1-210ENST00000551964 FMNL2Q96PY5 1086 aa22.94■■□□□ 1.26
APAF1-210ENST00000551964 MAP4K4O95819 1239 aaPredicted RBP22.93■■□□□ 1.26
APAF1-210ENST00000551964 MTERF4Q7Z6M4 381 aaKnown RBP22.93■■□□□ 1.26
APAF1-210ENST00000551964 RPAP2Q8IXW5 612 aaPredicted RBP22.93■■□□□ 1.26
APAF1-210ENST00000551964 CAGE1Q8TC20 777 aa22.93■■□□□ 1.26
APAF1-210ENST00000551964 SMARCE1Q969G3 411 aa22.93■■□□□ 1.26
APAF1-210ENST00000551964 HMGXB3Q12766 1538 aa22.93■■□□□ 1.26
APAF1-210ENST00000551964 PIP4K2AP48426 406 aaPredicted RBP22.93■■□□□ 1.26
APAF1-210ENST00000551964 NACAP1Q9BZK3 213 aa22.92■■□□□ 1.26
APAF1-210ENST00000551964 EPRSP07814 1512 aaKnown RBP22.92■■□□□ 1.26
APAF1-210ENST00000551964 STK3Q13188 491 aa22.92■■□□□ 1.26
APAF1-210ENST00000551964 CDK5RAP3Q96JB5 506 aa22.92■■□□□ 1.26
APAF1-210ENST00000551964 CCDC192P0DO97 292 aa22.92■■□□□ 1.26
APAF1-210ENST00000551964 SRGAP3O43295 1099 aa22.92■■□□□ 1.26
APAF1-210ENST00000551964 AACSQ86V21 672 aa22.92■■□□□ 1.26
APAF1-210ENST00000551964 MAGEC2Q9UBF1 373 aaPredicted RBP22.92■■□□□ 1.26
APAF1-210ENST00000551964 TMPOP42166 694 aaKnown RBP22.91■■□□□ 1.26
APAF1-210ENST00000551964 MYL6BP14649 208 aa22.91■■□□□ 1.26
APAF1-210ENST00000551964 ODF2Q5BJF6 829 aa22.91■■□□□ 1.26
APAF1-210ENST00000551964 TOM1L2Q6ZVM7 507 aa22.91■■□□□ 1.26
APAF1-210ENST00000551964 ZSCAN25Q6NSZ9 544 aa22.91■■□□□ 1.26
APAF1-210ENST00000551964 CDK13Q14004 1512 aaKnown RBP22.9■■□□□ 1.26
APAF1-210ENST00000551964 KRT85P78386 507 aa22.9■■□□□ 1.26
APAF1-210ENST00000551964 TRIM22Q8IYM9 498 aa22.9■■□□□ 1.26
APAF1-210ENST00000551964 PATL2C9JE40 543 aaKnown RBP22.9■■□□□ 1.26
APAF1-210ENST00000551964 MAP7D2Q96T17 732 aa22.9■■□□□ 1.26
APAF1-210ENST00000551964 BTBD11A6QL63 1104 aa22.89■■□□□ 1.26
APAF1-210ENST00000551964 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.26
APAF1-210ENST00000551964 ERCC4Q92889 916 aaPredicted RBP22.89■■□□□ 1.26
APAF1-210ENST00000551964 CIZ1Q9ULV3 898 aaPredicted RBP22.89■■□□□ 1.26
APAF1-210ENST00000551964 CCDC57Q2TAC2 916 aa22.89■■□□□ 1.26
APAF1-210ENST00000551964 BCL11BQ9C0K0 894 aaPredicted RBP22.89■■□□□ 1.26
APAF1-210ENST00000551964 TNMDQ9H2S6 317 aa22.89■■□□□ 1.25
APAF1-210ENST00000551964 RAPGEF3O95398 923 aa22.89■■□□□ 1.25
APAF1-210ENST00000551964 LARP1BQ659C4 914 aaKnown RBP22.89■■□□□ 1.25
APAF1-210ENST00000551964 TTLL5Q6EMB2 1281 aa22.89■■□□□ 1.25
APAF1-210ENST00000551964 ZSCAN31Q96LW9 406 aaPredicted RBP22.88■■□□□ 1.25
APAF1-210ENST00000551964 DHX8Q14562 1220 aaKnown RBP22.88■■□□□ 1.25
APAF1-210ENST00000551964 BLOC1S2Q6QNY1 142 aa22.88■■□□□ 1.25
APAF1-210ENST00000551964 DDX54Q8TDD1 881 aaKnown RBP22.88■■□□□ 1.25
APAF1-210ENST00000551964 PDRG1Q9NUG6 133 aa22.88■■□□□ 1.25
APAF1-210ENST00000551964 TMEM57Q8N5G2 664 aa22.87■■□□□ 1.25
APAF1-210ENST00000551964 CCDC141Q6ZP82 1450 aa22.87■■□□□ 1.25
APAF1-210ENST00000551964 BRPF3Q9ULD4 1205 aa22.87■■□□□ 1.25
APAF1-210ENST00000551964 CCDC69A6NI79 296 aa22.87■■□□□ 1.25
APAF1-210ENST00000551964 ME1P48163 572 aa22.87■■□□□ 1.25
APAF1-210ENST00000551964 HMGN5P82970 282 aaKnown RBP22.87■■□□□ 1.25
APAF1-210ENST00000551964 SLC26A8Q96RN1 970 aa22.87■■□□□ 1.25
APAF1-210ENST00000551964 KIAA0586Q9BVV6 1533 aa22.86■■□□□ 1.25
APAF1-210ENST00000551964 SPC24Q8NBT2 197 aa22.86■■□□□ 1.25
APAF1-210ENST00000551964 NUDT16Q96DE0 195 aaKnown RBP22.85■■□□□ 1.25
APAF1-210ENST00000551964 ANKLE2Q86XL3 938 aa22.85■■□□□ 1.25
APAF1-210ENST00000551964 CCAR1Q8IX12 1150 aaKnown RBP22.85■■□□□ 1.25
APAF1-210ENST00000551964 KLHL34Q8N239 644 aa22.85■■□□□ 1.25
APAF1-210ENST00000551964 DACH1Q9UI36 760 aa22.85■■□□□ 1.25
APAF1-210ENST00000551964 BRPF1P55201 1214 aaPredicted RBP22.85■■□□□ 1.25
APAF1-210ENST00000551964 GNAT3A8MTJ3 354 aa22.84■■□□□ 1.25
APAF1-210ENST00000551964 SERPINC1P01008 464 aa22.84■■□□□ 1.25
APAF1-210ENST00000551964 CWC27Q6UX04 472 aaKnown RBP22.84■■□□□ 1.25
APAF1-210ENST00000551964 JAKMIP1Q96N16 626 aaKnown RBP22.84■■□□□ 1.25
APAF1-210ENST00000551964 IL1RAPL2Q9NP60 686 aa22.84■■□□□ 1.25
APAF1-210ENST00000551964 MPHOSPH8Q99549 860 aa22.84■■□□□ 1.25
APAF1-210ENST00000551964 GRPEL1Q9HAV7 217 aa22.84■■□□□ 1.25
APAF1-210ENST00000551964 CTNNA3Q9UI47 895 aa22.84■■□□□ 1.25
APAF1-210ENST00000551964 KRT32Q14532 448 aa22.84■■□□□ 1.25
APAF1-210ENST00000551964 HSP90AB2PQ58FF8 381 aa22.84■■□□□ 1.25
APAF1-210ENST00000551964 CCDC61Q9Y6R9 512 aa22.84■■□□□ 1.25
APAF1-210ENST00000551964 FKBP4Q02790 459 aaKnown RBP eCLIP22.83■■□□□ 1.25
APAF1-210ENST00000551964 KRT18P05783 430 aaKnown RBP22.83■■□□□ 1.24
APAF1-210ENST00000551964 CDKL5O76039 1030 aa22.82■■□□□ 1.24
APAF1-210ENST00000551964 CEP126Q9P2H0 1117 aa22.82■■□□□ 1.24
APAF1-210ENST00000551964 ZFYVE27Q5T4F4 411 aa22.82■■□□□ 1.24
APAF1-210ENST00000551964 NOM1Q5C9Z4 860 aaKnown RBP22.82■■□□□ 1.24
APAF1-210ENST00000551964 MYO6Q9UM54 1294 aa22.81■■□□□ 1.24
APAF1-210ENST00000551964 SPATA32Q96LK8 384 aa22.81■■□□□ 1.24
APAF1-210ENST00000551964 PPP6R1Q9UPN7 881 aa22.81■■□□□ 1.24
APAF1-210ENST00000551964 CC2D2AQ9P2K1 1620 aa22.81■■□□□ 1.24
APAF1-210ENST00000551964 MCM4P33991 863 aa22.81■■□□□ 1.24
APAF1-210ENST00000551964 ZNHIT6Q9NWK9 470 aaKnown RBP22.8■■□□□ 1.24
APAF1-210ENST00000551964 PCF11O94913 1555 aaKnown RBP22.8■■□□□ 1.24
APAF1-210ENST00000551964 CAMSAP2Q08AD1 1489 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms