RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 GIGYF2Q6Y7W6 1299 aaKnown RBP12.66□□□□□ -0.38
RBFOX1-213ENST00000551752 PARP9Q8IXQ6 854 aa12.66□□□□□ -0.38
RBFOX1-213ENST00000551752 PLA2G2EQ9NZK7 142 aa12.66□□□□□ -0.38
RBFOX1-213ENST00000551752 PCDHB3Q9Y5E6 796 aa12.66□□□□□ -0.38
RBFOX1-213ENST00000551752 SHANK2Q9UPX8 1470 aa12.65□□□□□ -0.38
RBFOX1-213ENST00000551752 SSTR3P32745 418 aaPredicted RBP12.65□□□□□ -0.38
RBFOX1-213ENST00000551752 GGT6Q6P531 493 aa12.65□□□□□ -0.38
RBFOX1-213ENST00000551752 GCGRP47871 477 aa12.64□□□□□ -0.39
RBFOX1-213ENST00000551752 FGD6Q6ZV73 1430 aa12.63□□□□□ -0.39
RBFOX1-213ENST00000551752 KIF3BO15066 747 aa12.63□□□□□ -0.39
RBFOX1-213ENST00000551752 MTRQ99707 1265 aa12.63□□□□□ -0.39
RBFOX1-213ENST00000551752 PTPRKQ15262 1439 aa12.62□□□□□ -0.39
RBFOX1-213ENST00000551752 EIF2AK4Q9P2K8 1649 aaKnown RBP12.62□□□□□ -0.39
RBFOX1-213ENST00000551752 ITGBL1O95965 494 aaPredicted RBP12.61□□□□□ -0.39
RBFOX1-213ENST00000551752 COPS2P61201 443 aa12.61□□□□□ -0.39
RBFOX1-213ENST00000551752 KCNC4Q03721 635 aa12.61□□□□□ -0.39
RBFOX1-213ENST00000551752 IL21Q9HBE4 155 aa12.61□□□□□ -0.39
RBFOX1-213ENST00000551752 PTPN23Q9H3S7 1636 aa12.61□□□□□ -0.39
RBFOX1-213ENST00000551752 KDM5DQ9BY66 1539 aa12.61□□□□□ -0.39
RBFOX1-213ENST00000551752 DUOX2Q9NRD8 1548 aa12.61□□□□□ -0.39
RBFOX1-213ENST00000551752 PTPRTO14522 1441 aa12.61□□□□□ -0.39
RBFOX1-213ENST00000551752 ABCC5O15440 1437 aa12.61□□□□□ -0.39
RBFOX1-213ENST00000551752 HSPA2P54652 639 aa12.6□□□□□ -0.39
RBFOX1-213ENST00000551752 TJAP1Q5JTD0 557 aa12.6□□□□□ -0.39
RBFOX1-213ENST00000551752 WASHC2CQ9Y4E1 1318 aa12.6□□□□□ -0.39
RBFOX1-213ENST00000551752 RNF17Q9BXT8 1623 aaKnown RBP12.59□□□□□ -0.39
RBFOX1-213ENST00000551752 CLTCQ00610 1675 aaKnown RBP12.59□□□□□ -0.39
RBFOX1-213ENST00000551752 FUT2Q10981 343 aa12.59□□□□□ -0.39
RBFOX1-213ENST00000551752 ERBINQ96RT1 1412 aa12.59□□□□□ -0.39
RBFOX1-213ENST00000551752 PZPP20742 1482 aa12.59□□□□□ -0.39
RBFOX1-213ENST00000551752 DNMT1P26358 1616 aaKnown RBP12.59□□□□□ -0.39
RBFOX1-213ENST00000551752 DAPK1P53355 1430 aa12.58□□□□□ -0.4
RBFOX1-213ENST00000551752 BLOC1S3Q6QNY0 202 aa12.58□□□□□ -0.4
RBFOX1-213ENST00000551752 PLA2R1Q13018 1463 aa12.58□□□□□ -0.4
RBFOX1-213ENST00000551752 ANKRD30AQ9BXX3 1397 aa12.57□□□□□ -0.4
RBFOX1-213ENST00000551752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.57□□□□□ -0.4
RBFOX1-213ENST00000551752 KDM4AO75164 1064 aa12.57□□□□□ -0.4
RBFOX1-213ENST00000551752 PRKCSHP14314 528 aaPredicted RBP12.57□□□□□ -0.4
RBFOX1-213ENST00000551752 ATP6V1AP38606 617 aa12.57□□□□□ -0.4
RBFOX1-213ENST00000551752 PUS10Q3MIT2 529 aaKnown RBP12.57□□□□□ -0.4
RBFOX1-213ENST00000551752 GRIPAP1Q4V328 841 aa12.57□□□□□ -0.4
RBFOX1-213ENST00000551752 NUTM1Q86Y26 1132 aa12.57□□□□□ -0.4
RBFOX1-213ENST00000551752 ZC3H13Q5T200 1668 aaKnown RBP12.57□□□□□ -0.4
RBFOX1-213ENST00000551752 NCOA1Q15788 1441 aa12.56□□□□□ -0.4
RBFOX1-213ENST00000551752 BEGAINQ9BUH8 593 aa12.56□□□□□ -0.4
RBFOX1-213ENST00000551752 ADGRL2O95490 1459 aa12.56□□□□□ -0.4
RBFOX1-213ENST00000551752 CROCC2H7BZ55 1655 aa12.56□□□□□ -0.4
RBFOX1-213ENST00000551752 ZNF142P52746 1687 aaPredicted RBP12.56□□□□□ -0.4
RBFOX1-213ENST00000551752 STRCQ7RTU9 1775 aa12.56□□□□□ -0.4
RBFOX1-213ENST00000551752 KIF15Q9NS87 1388 aa12.56□□□□□ -0.4
RBFOX1-213ENST00000551752 ARHGAP31Q2M1Z3 1444 aa12.55□□□□□ -0.4
RBFOX1-213ENST00000551752 A2ML1A8K2U0 1454 aa12.55□□□□□ -0.4
RBFOX1-213ENST00000551752 NR1I2O75469 434 aa12.55□□□□□ -0.4
RBFOX1-213ENST00000551752 MS4A1P11836 297 aa12.55□□□□□ -0.4
RBFOX1-213ENST00000551752 FBXO41Q8TF61 875 aa12.55□□□□□ -0.4
RBFOX1-213ENST00000551752 NLRP1Q9C000 1473 aa12.54□□□□□ -0.4
RBFOX1-213ENST00000551752 USP46P62068 366 aa12.54□□□□□ -0.4
RBFOX1-213ENST00000551752 IFFO2Q5TF58 517 aa12.54□□□□□ -0.4
RBFOX1-213ENST00000551752 ZNF516Q92618 1163 aa12.54□□□□□ -0.4
RBFOX1-213ENST00000551752 ZPR1O75312 459 aa12.53□□□□□ -0.4
RBFOX1-213ENST00000551752 TNRQ92752 1358 aa12.53□□□□□ -0.4
RBFOX1-213ENST00000551752 ABCC3O15438 1527 aa12.52□□□□□ -0.4
RBFOX1-213ENST00000551752 CEP170BQ9Y4F5 1589 aaPredicted RBP12.52□□□□□ -0.4
RBFOX1-213ENST00000551752 MORN1Q5T089 497 aa12.52□□□□□ -0.41
RBFOX1-213ENST00000551752 SCUBE3Q8IX30 993 aa12.52□□□□□ -0.41
RBFOX1-213ENST00000551752 GPBP1L1Q9HC44 474 aaPredicted RBP12.52□□□□□ -0.41
RBFOX1-213ENST00000551752 PRDM15P57071 1507 aaPredicted RBP12.52□□□□□ -0.41
RBFOX1-213ENST00000551752 MROH1Q8NDA8 1641 aa12.51□□□□□ -0.41
RBFOX1-213ENST00000551752 MYO3AQ8NEV4 1616 aa12.51□□□□□ -0.41
RBFOX1-213ENST00000551752 THEMISQ8N1K5 641 aaPredicted RBP12.51□□□□□ -0.41
RBFOX1-213ENST00000551752 KDM4CQ9H3R0 1056 aa12.51□□□□□ -0.41
RBFOX1-213ENST00000551752 ROCK1Q13464 1354 aa12.51□□□□□ -0.41
RBFOX1-213ENST00000551752 CAMSAP1Q5T5Y3 1602 aa12.51□□□□□ -0.41
RBFOX1-213ENST00000551752 RRP7BPQ9NSQ0 103 aa12.5□□□□□ -0.41
RBFOX1-213ENST00000551752 KANK1Q14678 1352 aa12.5□□□□□ -0.41
RBFOX1-213ENST00000551752 LMTK2Q8IWU2 1503 aa12.5□□□□□ -0.41
RBFOX1-213ENST00000551752 SPATA31D1Q6ZQQ2 1576 aa12.5□□□□□ -0.41
RBFOX1-213ENST00000551752 DEPDC5O75140 1603 aa12.5□□□□□ -0.41
RBFOX1-213ENST00000551752 IQSEC2Q5JU85 1478 aa12.49□□□□□ -0.41
RBFOX1-213ENST00000551752 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
RBFOX1-213ENST00000551752 SPIRE2Q8WWL2 714 aa12.49□□□□□ -0.41
RBFOX1-213ENST00000551752 VWDEQ8N2E2 1590 aa12.48□□□□□ -0.41
RBFOX1-213ENST00000551752 HOXA2O43364 376 aa12.48□□□□□ -0.41
RBFOX1-213ENST00000551752 DIXDC1Q155Q3 683 aa12.48□□□□□ -0.41
RBFOX1-213ENST00000551752 FBXO31Q5XUX0 539 aaPredicted RBP12.48□□□□□ -0.41
RBFOX1-213ENST00000551752 SLC27A5Q9Y2P5 690 aa12.48□□□□□ -0.41
RBFOX1-213ENST00000551752 NKX2-3Q8TAU0 364 aa12.47□□□□□ -0.41
RBFOX1-213ENST00000551752 ERVK-7P63135 1459 aa12.46□□□□□ -0.41
RBFOX1-213ENST00000551752 ANKRD50Q9ULJ7 1429 aa12.46□□□□□ -0.41
RBFOX1-213ENST00000551752 FAM50AQ14320 339 aaKnown RBP12.46□□□□□ -0.41
RBFOX1-213ENST00000551752 TLL1O43897 1013 aa12.45□□□□□ -0.42
RBFOX1-213ENST00000551752 ANKLE2Q86XL3 938 aa12.45□□□□□ -0.42
RBFOX1-213ENST00000551752 TBC1D2Q9BYX2 928 aa12.45□□□□□ -0.42
RBFOX1-213ENST00000551752 MED14O60244 1454 aa12.45□□□□□ -0.42
RBFOX1-213ENST00000551752 UGGT1Q9NYU2 1555 aa12.44□□□□□ -0.42
RBFOX1-213ENST00000551752 Q3C1V9 767 aa12.44□□□□□ -0.42
RBFOX1-213ENST00000551752 HLA-CQ95604 372 aa12.44□□□□□ -0.42
RBFOX1-213ENST00000551752 CHIC2Q9UKJ5 165 aa12.44□□□□□ -0.42
RBFOX1-213ENST00000551752 RPRD2Q5VT52 1461 aaKnown RBP12.44□□□□□ -0.42
RBFOX1-213ENST00000551752 A0A0G2JS52 829 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms