RNA–Protein interactions for RNA: ENST00000550690.1

NPIPB12-206, Transcript of nuclear pore complex interacting protein family, member B12, human

TSL 5

Gene NPIPB12, Length 675 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB12-206	ENST00000550690	COG3	Q96JB2	828 aa		9.12	□□□□□ -0.95
NPIPB12-206	ENST00000550690	LMTK3	Q96Q04	1460 aa		9.11	□□□□□ -0.95
NPIPB12-206	ENST00000550690	ATMIN	O43313	823 aa	Predicted RBP	9.11	□□□□□ -0.95
NPIPB12-206	ENST00000550690	CANX	P27824	592 aa	Known RBP	9.11	□□□□□ -0.95
NPIPB12-206	ENST00000550690	RRP7A	Q9Y3A4	280 aa	Known RBP	9.11	□□□□□ -0.95
NPIPB12-206	ENST00000550690	PTCH1	Q13635	1447 aa		9.11	□□□□□ -0.95
NPIPB12-206	ENST00000550690	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	9.11	□□□□□ -0.95
NPIPB12-206	ENST00000550690	ITSN1	Q15811	1721 aa		9.11	□□□□□ -0.95
NPIPB12-206	ENST00000550690	AATK	Q6ZMQ8	1374 aa		9.11	□□□□□ -0.95
NPIPB12-206	ENST00000550690	FANCI	Q9NVI1	1328 aa		9.1	□□□□□ -0.95
NPIPB12-206	ENST00000550690	CDK12	Q9NYV4	1490 aa	Predicted RBP	9.1	□□□□□ -0.95
NPIPB12-206	ENST00000550690	TCERG1	O14776	1098 aa	Known RBP	9.1	□□□□□ -0.95
NPIPB12-206	ENST00000550690	FCHSD2	O94868	740 aa		9.1	□□□□□ -0.95
NPIPB12-206	ENST00000550690	CT47B1	P0C2W7	299 aa	Predicted RBP	9.1	□□□□□ -0.95
NPIPB12-206	ENST00000550690	MON2	Q7Z3U7	1717 aa		9.1	□□□□□ -0.95
NPIPB12-206	ENST00000550690	IL16	Q14005	1332 aa		9.09	□□□□□ -0.95
NPIPB12-206	ENST00000550690	TMPO	P42166	694 aa	Known RBP	9.09	□□□□□ -0.95
NPIPB12-206	ENST00000550690	PDE3A	Q14432	1141 aa		9.09	□□□□□ -0.95
NPIPB12-206	ENST00000550690	CENPQ	Q7L2Z9	268 aa	Predicted RBP	9.09	□□□□□ -0.95
NPIPB12-206	ENST00000550690	SLC26A8	Q96RN1	970 aa		9.09	□□□□□ -0.95
NPIPB12-206	ENST00000550690	POLK	Q9UBT6	870 aa		9.09	□□□□□ -0.95
NPIPB12-206	ENST00000550690	PIK3R4	Q99570	1358 aa		9.09	□□□□□ -0.95
NPIPB12-206	ENST00000550690	PLEKHG3	A1L390	1219 aa		9.08	□□□□□ -0.96
NPIPB12-206	ENST00000550690	SPDYE4	A6NLX3	237 aa		9.08	□□□□□ -0.96
NPIPB12-206	ENST00000550690	PPM1G	O15355	546 aa	Predicted RBP	9.08	□□□□□ -0.96
NPIPB12-206	ENST00000550690	MS4A1	P11836	297 aa		9.08	□□□□□ -0.96
NPIPB12-206	ENST00000550690	CALD1	Q05682	793 aa	Known RBP	9.08	□□□□□ -0.96
NPIPB12-206	ENST00000550690	AAMP	Q13685	434 aa		9.08	□□□□□ -0.96
NPIPB12-206	ENST00000550690	NME9	Q86XW9	330 aa		9.08	□□□□□ -0.96
NPIPB12-206	ENST00000550690	PLEKHF1	Q96S99	279 aa		9.08	□□□□□ -0.96
NPIPB12-206	ENST00000550690	AMOTL2	Q9Y2J4	779 aa		9.08	□□□□□ -0.96
NPIPB12-206	ENST00000550690	AKAP12	Q02952	1782 aa		9.08	□□□□□ -0.96
NPIPB12-206	ENST00000550690	PRR36	Q9H6K5	1346 aa		9.07	□□□□□ -0.96
NPIPB12-206	ENST00000550690	TOPAZ1	Q8N9V7	1692 aa		9.07	□□□□□ -0.96
NPIPB12-206	ENST00000550690	PTPRU	Q92729	1446 aa		9.07	□□□□□ -0.96
NPIPB12-206	ENST00000550690	C20orf194	Q5TEA3	1177 aa		9.07	□□□□□ -0.96
NPIPB12-206	ENST00000550690	TTC21A	Q8NDW8	1320 aa		9.06	□□□□□ -0.96
NPIPB12-206	ENST00000550690	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	9.06	□□□□□ -0.96
NPIPB12-206	ENST00000550690	BCAR3	O75815	825 aa		9.06	□□□□□ -0.96
NPIPB12-206	ENST00000550690	RARS	P54136	660 aa	Known RBP	9.06	□□□□□ -0.96
NPIPB12-206	ENST00000550690	RIPK4	P57078	832 aa		9.06	□□□□□ -0.96
NPIPB12-206	ENST00000550690	LMOD3	Q0VAK6	560 aa		9.06	□□□□□ -0.96
NPIPB12-206	ENST00000550690	TSPYL2	Q9H2G4	693 aa	Predicted RBP	9.06	□□□□□ -0.96
NPIPB12-206	ENST00000550690	ACE	P12821	1306 aa		9.05	□□□□□ -0.96
NPIPB12-206	ENST00000550690	TTC21B	Q7Z4L5	1316 aa		9.05	□□□□□ -0.96
NPIPB12-206	ENST00000550690	USP6	P35125	1406 aa		9.05	□□□□□ -0.96
NPIPB12-206	ENST00000550690	ANKAR	Q7Z5J8	1434 aa		9.05	□□□□□ -0.96
NPIPB12-206	ENST00000550690	LRRC7	Q96NW7	1537 aa		9.05	□□□□□ -0.96
NPIPB12-206	ENST00000550690	STRC	Q7RTU9	1775 aa		9.05	□□□□□ -0.96
NPIPB12-206	ENST00000550690	NRK	Q7Z2Y5	1582 aa		9.05	□□□□□ -0.96
NPIPB12-206	ENST00000550690	PRKAR2B	P31323	418 aa		9.05	□□□□□ -0.96
NPIPB12-206	ENST00000550690	CDAN1	Q8IWY9	1227 aa		9.05	□□□□□ -0.96
NPIPB12-206	ENST00000550690	RSPH6A	Q9H0K4	717 aa		9.05	□□□□□ -0.96
NPIPB12-206	ENST00000550690	XRN1	Q8IZH2	1706 aa	Known RBP	9.05	□□□□□ -0.96
NPIPB12-206	ENST00000550690	IL13	P35225	146 aa		9.04	□□□□□ -0.96
NPIPB12-206	ENST00000550690	NFE2L2	Q16236	605 aa		9.04	□□□□□ -0.96
NPIPB12-206	ENST00000550690	ANKLE2	Q86XL3	938 aa		9.04	□□□□□ -0.96
NPIPB12-206	ENST00000550690	FRAT1	Q92837	279 aa	Predicted RBP	9.04	□□□□□ -0.96
NPIPB12-206	ENST00000550690	TRIM35	Q9UPQ4	493 aa		9.04	□□□□□ -0.96
NPIPB12-206	ENST00000550690	EMILIN1	Q9Y6C2	1016 aa		9.04	□□□□□ -0.96
NPIPB12-206	ENST00000550690	KDM2B	Q8NHM5	1336 aa		9.04	□□□□□ -0.96
NPIPB12-206	ENST00000550690	NCKAP5L	Q9HCH0	1330 aa		9.04	□□□□□ -0.96
NPIPB12-206	ENST00000550690	ANP32A	P39687	249 aa	Known RBP	9.03	□□□□□ -0.96
NPIPB12-206	ENST00000550690	ATN1	P54259	1190 aa	Predicted RBP	9.03	□□□□□ -0.96
NPIPB12-206	ENST00000550690	NGDN	Q8NEJ9	315 aa	Known RBP	9.03	□□□□□ -0.96
NPIPB12-206	ENST00000550690	OVOS2	A0A0J9YW53	1432 aa		9.03	□□□□□ -0.96
NPIPB12-206	ENST00000550690	OVOS2	Q6IE36	1432 aa		9.03	□□□□□ -0.96
NPIPB12-206	ENST00000550690	MNX1	P50219	401 aa	Predicted RBP	9.02	□□□□□ -0.97
NPIPB12-206	ENST00000550690	ERICH6	Q7L0X2	663 aa		9.02	□□□□□ -0.97
NPIPB12-206	ENST00000550690	ZNF428	Q96B54	188 aa		9.02	□□□□□ -0.97
NPIPB12-206	ENST00000550690	USP31	Q70CQ4	1352 aa		9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	NUTM2F	A1L443	756 aa		9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	IPO8	O15397	1037 aa	Known RBP	9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	HMOX1	P09601	288 aa		9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	MYT1	Q01538	1121 aa		9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	EXOSC9	Q06265	439 aa	Known RBP	9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	RRS1	Q15050	365 aa	Known RBP	9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	ZKSCAN2	Q63HK3	967 aa		9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	SSH2	Q76I76	1423 aa		9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	FTSJ3	Q8IY81	847 aa	Known RBP	9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	TSR2	Q969E8	191 aa	Known RBP	9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	CLUAP1	Q96AJ1	413 aa		9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	SMC4	Q9NTJ3	1288 aa		9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	KIF16B	Q96L93	1317 aa		9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	MAP2	P11137	1827 aa	Known RBP	9.01	□□□□□ -0.97
NPIPB12-206	ENST00000550690	KCNA6	P17658	529 aa		9	□□□□□ -0.97
NPIPB12-206	ENST00000550690	GNAI1	P63096	354 aa		9	□□□□□ -0.97
NPIPB12-206	ENST00000550690	PMFBP1	Q8TBY8	1022 aa		9	□□□□□ -0.97
NPIPB12-206	ENST00000550690	PANK1	Q8TE04	598 aa		9	□□□□□ -0.97
NPIPB12-206	ENST00000550690	COG6	Q9Y2V7	657 aa		9	□□□□□ -0.97
NPIPB12-206	ENST00000550690	NALCN	Q8IZF0	1738 aa		9	□□□□□ -0.97
NPIPB12-206	ENST00000550690	FBLN1	P23142	703 aa		8.99	□□□□□ -0.97
NPIPB12-206	ENST00000550690	PDE4A	P27815	886 aa		8.99	□□□□□ -0.97
NPIPB12-206	ENST00000550690	ALDH1L2	Q3SY69	923 aa		8.99	□□□□□ -0.97
NPIPB12-206	ENST00000550690	DZIP1L	Q8IYY4	767 aa	Known RBP	8.99	□□□□□ -0.97
NPIPB12-206	ENST00000550690	IFT57	Q9NWB7	429 aa		8.99	□□□□□ -0.97
NPIPB12-206	ENST00000550690	FLT4	P35916	1363 aa		8.99	□□□□□ -0.97
NPIPB12-206	ENST00000550690	FMN2	Q9NZ56	1722 aa		8.98	□□□□□ -0.97
NPIPB12-206	ENST00000550690	HAP1	P54257	671 aa	Predicted RBP	8.98	□□□□□ -0.97
NPIPB12-206	ENST00000550690	EIF4A2	Q14240	407 aa	Known RBP	8.98	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms