RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 VAMP4O75379 141 aa18.65■□□□□ 0.58
PDE1B-207ENST00000550620 GNAI1P63096 354 aa18.65■□□□□ 0.58
PDE1B-207ENST00000550620 NFE2L2Q16236 605 aa18.65■□□□□ 0.58
PDE1B-207ENST00000550620 SLC52A1Q9NWF4 448 aa18.65■□□□□ 0.58
PDE1B-207ENST00000550620 ABCC4O15439 1325 aa18.65■□□□□ 0.58
PDE1B-207ENST00000550620 IFT57Q9NWB7 429 aa18.65■□□□□ 0.58
PDE1B-207ENST00000550620 CFAP65Q6ZU64 1925 aaKnown RBP18.64■□□□□ 0.58
PDE1B-207ENST00000550620 SIGLEC1Q9BZZ2 1709 aa18.64■□□□□ 0.58
PDE1B-207ENST00000550620 ERBB4Q15303 1308 aa18.64■□□□□ 0.57
PDE1B-207ENST00000550620 MINK1Q8N4C8 1332 aaPredicted RBP18.64■□□□□ 0.57
PDE1B-207ENST00000550620 CD2BP2O95400 341 aaKnown RBP18.64■□□□□ 0.57
PDE1B-207ENST00000550620 HSP90AA2PQ14568 343 aaPredicted RBP18.64■□□□□ 0.57
PDE1B-207ENST00000550620 KLHL40Q2TBA0 621 aa18.64■□□□□ 0.57
PDE1B-207ENST00000550620 PRAM1Q96QH2 718 aa18.64■□□□□ 0.57
PDE1B-207ENST00000550620 FOXD4L1Q9NU39 408 aa18.64■□□□□ 0.57
PDE1B-207ENST00000550620 RABEP1Q15276 862 aa18.63■□□□□ 0.57
PDE1B-207ENST00000550620 API5Q9BZZ5 524 aaKnown RBP18.63■□□□□ 0.57
PDE1B-207ENST00000550620 C1orf115Q9H7X2 142 aa18.63■□□□□ 0.57
PDE1B-207ENST00000550620 SSFA2P28290 1259 aa18.62■□□□□ 0.57
PDE1B-207ENST00000550620 NASPP49321 788 aaPredicted RBP18.62■□□□□ 0.57
PDE1B-207ENST00000550620 IDI1Q13907 227 aa18.62■□□□□ 0.57
PDE1B-207ENST00000550620 GAS2L2Q8NHY3 880 aa18.62■□□□□ 0.57
PDE1B-207ENST00000550620 PPP1R9BQ96SB3 815 aa18.62■□□□□ 0.57
PDE1B-207ENST00000550620 KIF24Q5T7B8 1368 aa18.62■□□□□ 0.57
PDE1B-207ENST00000550620 YTHDC2Q9H6S0 1430 aaKnown RBP18.61■□□□□ 0.57
PDE1B-207ENST00000550620 DDX49Q9Y6V7 483 aaKnown RBP18.61■□□□□ 0.57
PDE1B-207ENST00000550620 TPM2P07951 284 aa18.61■□□□□ 0.57
PDE1B-207ENST00000550620 NUCB2P80303 420 aa18.61■□□□□ 0.57
PDE1B-207ENST00000550620 KIF20BQ96Q89 1820 aa18.6■□□□□ 0.57
PDE1B-207ENST00000550620 BAG4O95429 457 aaKnown RBP18.6■□□□□ 0.57
PDE1B-207ENST00000550620 NPM1P06748 294 aaKnown RBP eCLIP18.6■□□□□ 0.57
PDE1B-207ENST00000550620 LMOD3Q0VAK6 560 aa18.6■□□□□ 0.57
PDE1B-207ENST00000550620 SIRT2Q8IXJ6 389 aa18.6■□□□□ 0.57
PDE1B-207ENST00000550620 RBM42Q9BTD8 480 aaKnown RBP18.6■□□□□ 0.57
PDE1B-207ENST00000550620 CDK19Q9BWU1 502 aa18.59■□□□□ 0.57
PDE1B-207ENST00000550620 POLKQ9UBT6 870 aa18.59■□□□□ 0.57
PDE1B-207ENST00000550620 ZNF853P0CG23 659 aa18.58■□□□□ 0.57
PDE1B-207ENST00000550620 TWISTNBQ3B726 338 aaPredicted RBP18.58■□□□□ 0.57
PDE1B-207ENST00000550620 CABP1Q9NZU7 370 aa18.58■□□□□ 0.57
PDE1B-207ENST00000550620 TSPYL6Q8N831 410 aa18.58■□□□□ 0.56
PDE1B-207ENST00000550620 MBIPQ9NS73 344 aa18.57■□□□□ 0.56
PDE1B-207ENST00000550620 ARHGEF40Q8TER5 1519 aa18.57■□□□□ 0.56
PDE1B-207ENST00000550620 GSPT1P15170 499 aaKnown RBP18.57■□□□□ 0.56
PDE1B-207ENST00000550620 ZSCAN30Q86W11 494 aa18.57■□□□□ 0.56
PDE1B-207ENST00000550620 ZNF445P59923 1031 aa18.56■□□□□ 0.56
PDE1B-207ENST00000550620 INTS3Q68E01 1043 aaKnown RBP18.56■□□□□ 0.56
PDE1B-207ENST00000550620 PLEKHM2Q8IWE5 1019 aa18.56■□□□□ 0.56
PDE1B-207ENST00000550620 PHACTR3Q96KR7 559 aa18.56■□□□□ 0.56
PDE1B-207ENST00000550620 ATP7BP35670 1465 aa18.56■□□□□ 0.56
PDE1B-207ENST00000550620 HMOX1P09601 288 aa18.55■□□□□ 0.56
PDE1B-207ENST00000550620 TTC22Q5TAA0 569 aa18.55■□□□□ 0.56
PDE1B-207ENST00000550620 CASC1Q6TDU7 716 aa18.55■□□□□ 0.56
PDE1B-207ENST00000550620 DCTPP1Q9H773 170 aa18.55■□□□□ 0.56
PDE1B-207ENST00000550620 CWC22Q9HCG8 908 aaKnown RBP18.55■□□□□ 0.56
PDE1B-207ENST00000550620 THUMPD2Q9BTF0 503 aaKnown RBP18.55■□□□□ 0.56
PDE1B-207ENST00000550620 YEATS2Q9ULM3 1422 aa18.54■□□□□ 0.56
PDE1B-207ENST00000550620 ELL2O00472 640 aaPredicted RBP18.54■□□□□ 0.56
PDE1B-207ENST00000550620 MSNP26038 577 aaKnown RBP18.54■□□□□ 0.56
PDE1B-207ENST00000550620 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.54■□□□□ 0.56
PDE1B-207ENST00000550620 HAP1P54257 671 aaPredicted RBP18.53■□□□□ 0.56
PDE1B-207ENST00000550620 MCTP1Q6DN14 999 aa18.53■□□□□ 0.56
PDE1B-207ENST00000550620 ST18O60284 1047 aa18.52■□□□□ 0.56
PDE1B-207ENST00000550620 HS1BP3Q53T59 392 aa18.52■□□□□ 0.56
PDE1B-207ENST00000550620 TMEM131LA2VDJ0 1609 aa18.52■□□□□ 0.56
PDE1B-207ENST00000550620 CYP2E1P05181 493 aaPredicted RBP18.52■□□□□ 0.56
PDE1B-207ENST00000550620 USP26Q9BXU7 913 aa18.52■□□□□ 0.56
PDE1B-207ENST00000550620 DIP2CQ9Y2E4 1556 aa18.52■□□□□ 0.55
PDE1B-207ENST00000550620 NEO1Q92859 1461 aa18.52■□□□□ 0.55
PDE1B-207ENST00000550620 CDK12Q9NYV4 1490 aaPredicted RBP18.52■□□□□ 0.55
PDE1B-207ENST00000550620 IL13P35225 146 aa18.51■□□□□ 0.55
PDE1B-207ENST00000550620 RIMS2Q9UQ26 1411 aa18.5■□□□□ 0.55
PDE1B-207ENST00000550620 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.5■□□□□ 0.55
PDE1B-207ENST00000550620 RPAP2Q8IXW5 612 aaPredicted RBP18.5■□□□□ 0.55
PDE1B-207ENST00000550620 C8orf58Q8NAV2 365 aa18.5■□□□□ 0.55
PDE1B-207ENST00000550620 ANKRD44Q8N8A2 993 aa18.49■□□□□ 0.55
PDE1B-207ENST00000550620 LMBRD1Q9NUN5 540 aa18.49■□□□□ 0.55
PDE1B-207ENST00000550620 ALKQ9UM73 1620 aa18.49■□□□□ 0.55
PDE1B-207ENST00000550620 NCLP19338 710 aaKnown RBP18.49■□□□□ 0.55
PDE1B-207ENST00000550620 ZSCAN23Q3MJ62 389 aa18.49■□□□□ 0.55
PDE1B-207ENST00000550620 CAVIN1Q6NZI2 390 aaKnown RBP18.49■□□□□ 0.55
PDE1B-207ENST00000550620 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
PDE1B-207ENST00000550620 AATKQ6ZMQ8 1374 aa18.49■□□□□ 0.55
PDE1B-207ENST00000550620 CPSF1Q10570 1443 aaKnown RBP18.48■□□□□ 0.55
PDE1B-207ENST00000550620 OFD1O75665 1012 aa18.48■□□□□ 0.55
PDE1B-207ENST00000550620 REC8O95072 547 aa18.48■□□□□ 0.55
PDE1B-207ENST00000550620 TERF1P54274 439 aa18.48■□□□□ 0.55
PDE1B-207ENST00000550620 KIAA1211Q6ZU35 1233 aa18.48■□□□□ 0.55
PDE1B-207ENST00000550620 EMILIN1Q9Y6C2 1016 aa18.48■□□□□ 0.55
PDE1B-207ENST00000550620 DLC1Q96QB1 1528 aa18.48■□□□□ 0.55
PDE1B-207ENST00000550620 EDC4Q6P2E9 1401 aaKnown RBP18.47■□□□□ 0.55
PDE1B-207ENST00000550620 RAPGEF3O95398 923 aa18.47■□□□□ 0.55
PDE1B-207ENST00000550620 FBLN1P23142 703 aa18.47■□□□□ 0.55
PDE1B-207ENST00000550620 PREX1Q8TCU6 1659 aa18.46■□□□□ 0.55
PDE1B-207ENST00000550620 KNDC1Q76NI1 1749 aa18.45■□□□□ 0.54
PDE1B-207ENST00000550620 ATP10DQ9P241 1426 aa18.45■□□□□ 0.54
PDE1B-207ENST00000550620 SDSP20132 328 aa18.45■□□□□ 0.54
PDE1B-207ENST00000550620 CEP85Q6P2H3 762 aa18.44■□□□□ 0.54
PDE1B-207ENST00000550620 MYO5BQ9ULV0 1848 aa18.44■□□□□ 0.54
PDE1B-207ENST00000550620 C16orf71Q8IYS4 520 aaPredicted RBP18.44■□□□□ 0.54
PDE1B-207ENST00000550620 PDCL3Q9H2J4 239 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms