RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 PANK2Q9BZ23 570 aa18.81■□□□□ 0.6
RBFOX1-212ENST00000550418 NUP62CLQ9H1M0 184 aa18.81■□□□□ 0.6
RBFOX1-212ENST00000550418 LRPPRCP42704 1394 aaKnown RBP18.81■□□□□ 0.6
RBFOX1-212ENST00000550418 THOC2Q8NI27 1593 aaKnown RBP18.81■□□□□ 0.6
RBFOX1-212ENST00000550418 GNAI2P04899 355 aa18.81■□□□□ 0.6
RBFOX1-212ENST00000550418 RDXP35241 583 aaKnown RBP18.81■□□□□ 0.6
RBFOX1-212ENST00000550418 TMEM57Q8N5G2 664 aa18.81■□□□□ 0.6
RBFOX1-212ENST00000550418 C1orf141Q5JVX7 400 aa18.8■□□□□ 0.6
RBFOX1-212ENST00000550418 FSD1Q9BTV5 496 aa18.8■□□□□ 0.6
RBFOX1-212ENST00000550418 DUSP27Q5VZP5 1158 aa18.8■□□□□ 0.6
RBFOX1-212ENST00000550418 LARP1BQ659C4 914 aaKnown RBP18.8■□□□□ 0.6
RBFOX1-212ENST00000550418 FILIP1Q7Z7B0 1213 aa18.8■□□□□ 0.6
RBFOX1-212ENST00000550418 SLC12A5Q9H2X9 1139 aa18.8■□□□□ 0.6
RBFOX1-212ENST00000550418 CEBPZQ03701 1054 aaKnown RBP18.8■□□□□ 0.6
RBFOX1-212ENST00000550418 ZNF396Q96N95 335 aaPredicted RBP18.8■□□□□ 0.6
RBFOX1-212ENST00000550418 RALYLQ86SE5 291 aaKnown RBP18.79■□□□□ 0.6
RBFOX1-212ENST00000550418 KLHL40Q2TBA0 621 aa18.79■□□□□ 0.6
RBFOX1-212ENST00000550418 TTLL5Q6EMB2 1281 aa18.79■□□□□ 0.6
RBFOX1-212ENST00000550418 NKTRP30414 1462 aaKnown RBP18.79■□□□□ 0.6
RBFOX1-212ENST00000550418 NFXL1Q6ZNB6 911 aa18.78■□□□□ 0.6
RBFOX1-212ENST00000550418 ZNF428Q96B54 188 aa18.78■□□□□ 0.6
RBFOX1-212ENST00000550418 MAPK8IP2Q13387 824 aaPredicted RBP18.78■□□□□ 0.6
RBFOX1-212ENST00000550418 LRRCC1Q9C099 1032 aa18.78■□□□□ 0.6
RBFOX1-212ENST00000550418 CAGE1Q8TC20 777 aa18.78■□□□□ 0.6
RBFOX1-212ENST00000550418 STK38Q15208 465 aa18.77■□□□□ 0.6
RBFOX1-212ENST00000550418 AXDND1Q5T1B0 1012 aaPredicted RBP18.77■□□□□ 0.6
RBFOX1-212ENST00000550418 UBXN4Q92575 508 aa18.77■□□□□ 0.6
RBFOX1-212ENST00000550418 CGNQ9P2M7 1197 aaKnown RBP18.77■□□□□ 0.6
RBFOX1-212ENST00000550418 HIP1O00291 1037 aa18.77■□□□□ 0.59
RBFOX1-212ENST00000550418 MAP3K11Q16584 847 aa18.77■□□□□ 0.59
RBFOX1-212ENST00000550418 BAG4O95429 457 aaKnown RBP18.76■□□□□ 0.59
RBFOX1-212ENST00000550418 SERPINC1P01008 464 aa18.76■□□□□ 0.59
RBFOX1-212ENST00000550418 USP25Q9UHP3 1055 aa18.76■□□□□ 0.59
RBFOX1-212ENST00000550418 ATF3P18847 181 aa18.76■□□□□ 0.59
RBFOX1-212ENST00000550418 CCDC183Q5T5S1 534 aa18.76■□□□□ 0.59
RBFOX1-212ENST00000550418 SPATA32Q96LK8 384 aa18.76■□□□□ 0.59
RBFOX1-212ENST00000550418 ERLIN1O75477 346 aa18.75■□□□□ 0.59
RBFOX1-212ENST00000550418 EIF3JO75822 258 aaKnown RBP18.75■□□□□ 0.59
RBFOX1-212ENST00000550418 ANKRD1Q15327 319 aa18.75■□□□□ 0.59
RBFOX1-212ENST00000550418 PHF23Q9BUL5 403 aaPredicted RBP18.75■□□□□ 0.59
RBFOX1-212ENST00000550418 PPP4R3BQ5MIZ7 849 aa18.75■□□□□ 0.59
RBFOX1-212ENST00000550418 RPAP2Q8IXW5 612 aaPredicted RBP18.75■□□□□ 0.59
RBFOX1-212ENST00000550418 KIF2AO00139 706 aaPredicted RBP18.75■□□□□ 0.59
RBFOX1-212ENST00000550418 IGHDP01880 384 aa18.75■□□□□ 0.59
RBFOX1-212ENST00000550418 NAP1L1P55209 391 aaKnown RBP18.75■□□□□ 0.59
RBFOX1-212ENST00000550418 PTPN14Q15678 1187 aa18.74■□□□□ 0.59
RBFOX1-212ENST00000550418 CEP57L1Q8IYX8 460 aa18.74■□□□□ 0.59
RBFOX1-212ENST00000550418 TSPYL1Q9H0U9 437 aa18.74■□□□□ 0.59
RBFOX1-212ENST00000550418 CCDC30Q5VVM6 783 aa18.74■□□□□ 0.59
RBFOX1-212ENST00000550418 CCDC141Q6ZP82 1450 aa18.74■□□□□ 0.59
RBFOX1-212ENST00000550418 ME1P48163 572 aa18.74■□□□□ 0.59
RBFOX1-212ENST00000550418 PRIMPOLQ96LW4 560 aa18.74■□□□□ 0.59
RBFOX1-212ENST00000550418 SRCIN1Q9C0H9 1055 aa18.74■□□□□ 0.59
RBFOX1-212ENST00000550418 CALCOCO1Q9P1Z2 691 aa18.74■□□□□ 0.59
RBFOX1-212ENST00000550418 SLC4A2P04920 1241 aa18.74■□□□□ 0.59
RBFOX1-212ENST00000550418 SKIDA1Q1XH10 827 aa18.74■□□□□ 0.59
RBFOX1-212ENST00000550418 ZSCAN31Q96LW9 406 aaPredicted RBP18.74■□□□□ 0.59
RBFOX1-212ENST00000550418 CALRP27797 417 aaKnown RBP18.73■□□□□ 0.59
RBFOX1-212ENST00000550418 C8orf34Q49A92 452 aa18.73■□□□□ 0.59
RBFOX1-212ENST00000550418 TMCO3Q6UWJ1 677 aa18.73■□□□□ 0.59
RBFOX1-212ENST00000550418 FAM177A1Q8N128 213 aaPredicted RBP18.73■□□□□ 0.59
RBFOX1-212ENST00000550418 CCT4P50991 539 aaKnown RBP18.73■□□□□ 0.59
RBFOX1-212ENST00000550418 FILIP1LQ4L180 1135 aa18.73■□□□□ 0.59
RBFOX1-212ENST00000550418 SMARCE1Q969G3 411 aa18.73■□□□□ 0.59
RBFOX1-212ENST00000550418 PDIA4P13667 645 aaKnown RBP18.73■□□□□ 0.59
RBFOX1-212ENST00000550418 DCTN1Q14203 1278 aa18.72■□□□□ 0.59
RBFOX1-212ENST00000550418 PPP6R1Q9UPN7 881 aa18.72■□□□□ 0.59
RBFOX1-212ENST00000550418 EVA1CP58658 441 aa18.71■□□□□ 0.59
RBFOX1-212ENST00000550418 KIF18AQ8NI77 898 aa18.71■□□□□ 0.59
RBFOX1-212ENST00000550418 SSH1Q8WYL5 1049 aa18.71■□□□□ 0.59
RBFOX1-212ENST00000550418 NEUROD6Q96NK8 337 aa18.71■□□□□ 0.59
RBFOX1-212ENST00000550418 DEF6Q9H4E7 631 aa18.71■□□□□ 0.59
RBFOX1-212ENST00000550418 STK3Q13188 491 aa18.7■□□□□ 0.58
RBFOX1-212ENST00000550418 CFAP45Q9UL16 551 aa18.7■□□□□ 0.58
RBFOX1-212ENST00000550418 POGZQ7Z3K3 1410 aa18.7■□□□□ 0.58
RBFOX1-212ENST00000550418 UPF3BQ9BZI7 483 aaKnown RBP18.7■□□□□ 0.58
RBFOX1-212ENST00000550418 GPATCH8Q9UKJ3 1502 aaKnown RBP18.7■□□□□ 0.58
RBFOX1-212ENST00000550418 CCDC191Q8NCU4 936 aa18.7■□□□□ 0.58
RBFOX1-212ENST00000550418 PRAM1Q96QH2 718 aa18.7■□□□□ 0.58
RBFOX1-212ENST00000550418 PDRG1Q9NUG6 133 aa18.7■□□□□ 0.58
RBFOX1-212ENST00000550418 ERICH2A1L162 156 aa18.69■□□□□ 0.58
RBFOX1-212ENST00000550418 DHX16O60231 1041 aaKnown RBP18.69■□□□□ 0.58
RBFOX1-212ENST00000550418 TNNT1P13805 278 aa18.69■□□□□ 0.58
RBFOX1-212ENST00000550418 WASHC4Q2M389 1173 aa18.69■□□□□ 0.58
RBFOX1-212ENST00000550418 JMYQ8N9B5 988 aa18.69■□□□□ 0.58
RBFOX1-212ENST00000550418 TMPOP42166 694 aaKnown RBP18.69■□□□□ 0.58
RBFOX1-212ENST00000550418 NUP153P49790 1475 aaKnown RBP18.69■□□□□ 0.58
RBFOX1-212ENST00000550418 BLOC1S2Q6QNY1 142 aa18.69■□□□□ 0.58
RBFOX1-212ENST00000550418 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
RBFOX1-212ENST00000550418 CBFA2T2O43439 604 aa18.68■□□□□ 0.58
RBFOX1-212ENST00000550418 USP8P40818 1118 aa18.68■□□□□ 0.58
RBFOX1-212ENST00000550418 ZSCAN23Q3MJ62 389 aa18.68■□□□□ 0.58
RBFOX1-212ENST00000550418 JAKMIP1Q96N16 626 aaKnown RBP18.68■□□□□ 0.58
RBFOX1-212ENST00000550418 SPDYE4A6NLX3 237 aa18.68■□□□□ 0.58
RBFOX1-212ENST00000550418 BMP2KLQ5H9B9 411 aa18.68■□□□□ 0.58
RBFOX1-212ENST00000550418 KIAA0754O94854 1291 aa18.68■□□□□ 0.58
RBFOX1-212ENST00000550418 CAMK4Q16566 473 aa18.68■□□□□ 0.58
RBFOX1-212ENST00000550418 ERC1Q8IUD2 1116 aa18.68■□□□□ 0.58
RBFOX1-212ENST00000550418 C16orf45Q96MC5 204 aaPredicted RBP18.68■□□□□ 0.58
RBFOX1-212ENST00000550418 ADCY5O95622 1261 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms