RNA–Protein interactions for RNA: ENST00000549947.1

CNOT2-221, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 489 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-221ENST00000549947 RAD21O60216 631 aa13.16□□□□□ -0.3
CNOT2-221ENST00000549947 INTS6LQ5JSJ4 861 aaKnown RBP13.15□□□□□ -0.3
CNOT2-221ENST00000549947 TRAF7Q6Q0C0 670 aa13.15□□□□□ -0.3
CNOT2-221ENST00000549947 KLF16Q9BXK1 252 aaPredicted RBP13.15□□□□□ -0.3
CNOT2-221ENST00000549947 AAASQ9NRG9 546 aa13.15□□□□□ -0.3
CNOT2-221ENST00000549947 CDV3Q9UKY7 258 aaKnown RBP13.15□□□□□ -0.3
CNOT2-221ENST00000549947 ESPNB1AK53 854 aa13.13□□□□□ -0.31
CNOT2-221ENST00000549947 NBPF20Q3BBV1 942 aa13.13□□□□□ -0.31
CNOT2-221ENST00000549947 CRIPAKQ8N1N5 446 aa13.13□□□□□ -0.31
CNOT2-221ENST00000549947 TIMP2P16035 220 aa13.12□□□□□ -0.31
CNOT2-221ENST00000549947 DACH1Q9UI36 760 aa13.12□□□□□ -0.31
CNOT2-221ENST00000549947 GIGYF1O75420 1035 aaPredicted RBP13.11□□□□□ -0.31
CNOT2-221ENST00000549947 SMCPP49901 116 aaPredicted RBP13.11□□□□□ -0.31
CNOT2-221ENST00000549947 WDR4P57081 412 aaKnown RBP13.11□□□□□ -0.31
CNOT2-221ENST00000549947 RAB15P59190 212 aa13.11□□□□□ -0.31
CNOT2-221ENST00000549947 WASHC4Q2M389 1173 aa13.11□□□□□ -0.31
CNOT2-221ENST00000549947 CCDC116Q8IYX3 515 aa13.11□□□□□ -0.31
CNOT2-221ENST00000549947 ITPKCQ96DU7 683 aa13.11□□□□□ -0.31
CNOT2-221ENST00000549947 ZFAND3Q9H8U3 227 aa13.11□□□□□ -0.31
CNOT2-221ENST00000549947 POM121CA8CG34 1229 aa13.1□□□□□ -0.31
CNOT2-221ENST00000549947 AXIN1O15169 862 aa13.1□□□□□ -0.31
CNOT2-221ENST00000549947 CTC1Q2NKJ3 1217 aa13.1□□□□□ -0.31
CNOT2-221ENST00000549947 FNBP4Q8N3X1 1017 aaPredicted RBP13.1□□□□□ -0.31
CNOT2-221ENST00000549947 ZNF330Q9Y3S2 320 aaPredicted RBP13.1□□□□□ -0.31
CNOT2-221ENST00000549947 ZIC2O95409 532 aaPredicted RBP13.08□□□□□ -0.32
CNOT2-221ENST00000549947 PPP1R26Q5T8A7 1209 aaPredicted RBP13.08□□□□□ -0.32
CNOT2-221ENST00000549947 PROSER2Q86WR7 435 aaPredicted RBP13.08□□□□□ -0.32
CNOT2-221ENST00000549947 TMPRSS4Q9NRS4 437 aa13.08□□□□□ -0.32
CNOT2-221ENST00000549947 CAPN5O15484 640 aaPredicted RBP13.07□□□□□ -0.32
CNOT2-221ENST00000549947 EIF4G2P78344 907 aaKnown RBP eCLIP13.07□□□□□ -0.32
CNOT2-221ENST00000549947 ERVH48-1M5A8F1 160 aa13.06□□□□□ -0.32
CNOT2-221ENST00000549947 CEP126Q9P2H0 1117 aa13.06□□□□□ -0.32
CNOT2-221ENST00000549947 A6NJR5 290 aa13.05□□□□□ -0.32
CNOT2-221ENST00000549947 MCCD1P59942 119 aaPredicted RBP13.05□□□□□ -0.32
CNOT2-221ENST00000549947 ADAMTS19Q8TE59 1207 aa13.04□□□□□ -0.32
CNOT2-221ENST00000549947 EMILIN1Q9Y6C2 1016 aa13.04□□□□□ -0.32
CNOT2-221ENST00000549947 BMP1P13497 986 aa13.03□□□□□ -0.32
CNOT2-221ENST00000549947 SEPT12Q8IYM1 358 aa13.03□□□□□ -0.32
CNOT2-221ENST00000549947 WWC1Q8IX03 1113 aa13.02□□□□□ -0.33
CNOT2-221ENST00000549947 ZNF784Q8NCA9 323 aaPredicted RBP13.02□□□□□ -0.33
CNOT2-221ENST00000549947 ALG2Q9H553 416 aa13.02□□□□□ -0.33
CNOT2-221ENST00000549947 DHX9Q08211 1270 aaKnown RBP13.01□□□□□ -0.33
CNOT2-221ENST00000549947 CBLBQ13191 982 aa13.01□□□□□ -0.33
CNOT2-221ENST00000549947 TRIM46Q7Z4K8 759 aa13.01□□□□□ -0.33
CNOT2-221ENST00000549947 ZNF592Q92610 1267 aa13.01□□□□□ -0.33
CNOT2-221ENST00000549947 PHTF2Q8N3S3 785 aa13□□□□□ -0.33
CNOT2-221ENST00000549947 CCDC85AQ96PX6 553 aaPredicted RBP13□□□□□ -0.33
CNOT2-221ENST00000549947 ATP13A2Q9NQ11 1180 aa13□□□□□ -0.33
CNOT2-221ENST00000549947 PGPEP1Q9NXJ5 209 aa13□□□□□ -0.33
CNOT2-221ENST00000549947 POTECB2RU33 542 aa12.99□□□□□ -0.33
CNOT2-221ENST00000549947 LILRA1O75019 489 aa12.99□□□□□ -0.33
CNOT2-221ENST00000549947 SOX11P35716 441 aa12.99□□□□□ -0.33
CNOT2-221ENST00000549947 SEMA3FQ13275 785 aa12.99□□□□□ -0.33
CNOT2-221ENST00000549947 TSGA10IPQ3SY00 556 aa12.99□□□□□ -0.33
CNOT2-221ENST00000549947 PIK3CDO00329 1044 aa12.97□□□□□ -0.33
CNOT2-221ENST00000549947 MEIOBQ8N635 442 aa12.97□□□□□ -0.33
CNOT2-221ENST00000549947 CYLDQ9NQC7 956 aa12.97□□□□□ -0.33
CNOT2-221ENST00000549947 GMPR2Q9P2T1 348 aaKnown RBP12.97□□□□□ -0.33
CNOT2-221ENST00000549947 ADD1P35611 737 aaKnown RBP12.96□□□□□ -0.33
CNOT2-221ENST00000549947 SCTRP47872 440 aa12.96□□□□□ -0.33
CNOT2-221ENST00000549947 RNF20Q5VTR2 975 aa12.96□□□□□ -0.33
CNOT2-221ENST00000549947 Q6ZVU0 165 aa12.96□□□□□ -0.33
CNOT2-221ENST00000549947 CDCA7Q9BWT1 371 aaPredicted RBP12.96□□□□□ -0.33
CNOT2-221ENST00000549947 PCDHB11Q9Y5F2 797 aa12.96□□□□□ -0.33
CNOT2-221ENST00000549947 TRAK2O60296 914 aa12.94□□□□□ -0.34
CNOT2-221ENST00000549947 SLFNL1Q499Z3 407 aa12.94□□□□□ -0.34
CNOT2-221ENST00000549947 HDGFL1Q5TGJ6 251 aa12.94□□□□□ -0.34
CNOT2-221ENST00000549947 MRPL14Q6P1L8 145 aaKnown RBP12.94□□□□□ -0.34
CNOT2-221ENST00000549947 RNF135Q8IUD6 432 aa12.93□□□□□ -0.34
CNOT2-221ENST00000549947 AGBL1Q96MI9 1066 aa12.93□□□□□ -0.34
CNOT2-221ENST00000549947 ZMYND15Q9H091 742 aa12.93□□□□□ -0.34
CNOT2-221ENST00000549947 CHIC2Q9UKJ5 165 aa12.93□□□□□ -0.34
CNOT2-221ENST00000549947 ERVK-9P63128 1117 aa12.92□□□□□ -0.34
CNOT2-221ENST00000549947 GLMNQ92990 594 aa12.92□□□□□ -0.34
CNOT2-221ENST00000549947 UCN2Q96RP3 112 aa12.92□□□□□ -0.34
CNOT2-221ENST00000549947 LINC00528Q8N1L1 170 aa12.91□□□□□ -0.34
CNOT2-221ENST00000549947 KDF1Q8NAX2 398 aaPredicted RBP12.91□□□□□ -0.34
CNOT2-221ENST00000549947 ZFP42Q96MM3 310 aa12.91□□□□□ -0.34
CNOT2-221ENST00000549947 PURBQ96QR8 312 aaKnown RBP12.91□□□□□ -0.34
CNOT2-221ENST00000549947 C6orf118Q5T5N4 469 aa12.89□□□□□ -0.35
CNOT2-221ENST00000549947 CC2D2BQ6DHV5 1058 aa12.89□□□□□ -0.35
CNOT2-221ENST00000549947 CCDC125Q86Z20 511 aa12.89□□□□□ -0.35
CNOT2-221ENST00000549947 ZNF777Q9ULD5 760 aaPredicted RBP12.89□□□□□ -0.35
CNOT2-221ENST00000549947 DOLKQ9UPQ8 538 aa12.89□□□□□ -0.35
CNOT2-221ENST00000549947 ADH1AP07327 375 aa12.88□□□□□ -0.35
CNOT2-221ENST00000549947 PLPP7Q8NBV4 271 aa12.88□□□□□ -0.35
CNOT2-221ENST00000549947 OSBPL3Q9H4L5 887 aa12.87□□□□□ -0.35
CNOT2-221ENST00000549947 SNRPBP14678 240 aaKnown RBP12.86□□□□□ -0.35
CNOT2-221ENST00000549947 RELBQ01201 579 aa12.86□□□□□ -0.35
CNOT2-221ENST00000549947 BMP2P12643 396 aa12.85□□□□□ -0.35
CNOT2-221ENST00000549947 OXLD1Q5BKU9 147 aa12.85□□□□□ -0.35
CNOT2-221ENST00000549947 ZNF787Q6DD87 383 aa12.85□□□□□ -0.35
CNOT2-221ENST00000549947 C14orf37Q86TY3 774 aa12.85□□□□□ -0.35
CNOT2-221ENST00000549947 TRIM47Q96LD4 638 aa12.85□□□□□ -0.35
CNOT2-221ENST00000549947 TSEN34Q9BSV6 310 aaKnown RBP12.85□□□□□ -0.35
CNOT2-221ENST00000549947 SKIP12755 728 aa12.84□□□□□ -0.35
CNOT2-221ENST00000549947 SCARF1Q14162 830 aa12.84□□□□□ -0.35
CNOT2-221ENST00000549947 TBC1D9Q6ZT07 1266 aa12.84□□□□□ -0.35
CNOT2-221ENST00000549947 ZNF395Q9H8N7 513 aaPredicted RBP12.84□□□□□ -0.35
CNOT2-221ENST00000549947 C11orf95C9JLR9 678 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms