RNA–Protein interactions for RNA: ENST00000549913.6

RPH3A-217, Transcript of rabphilin 3A, humanhuman

TSL 1 (best)

Gene RPH3A, Length 5,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-217ENST00000549913 PROSER2Q86WR7 435 aaPredicted RBP13.47□□□□□ -0.25
RPH3A-217ENST00000549913 CEP89Q96ST8 783 aa13.47□□□□□ -0.25
RPH3A-217ENST00000549913 SLC26A8Q96RN1 970 aa13.47□□□□□ -0.25
RPH3A-217ENST00000549913 TATP17735 454 aaPredicted RBP13.47□□□□□ -0.25
RPH3A-217ENST00000549913 DUSP27Q5VZP5 1158 aa13.47□□□□□ -0.25
RPH3A-217ENST00000549913 NUDT16Q96DE0 195 aaKnown RBP13.46□□□□□ -0.25
RPH3A-217ENST00000549913 DNAJC2Q99543 621 aaKnown RBP13.46□□□□□ -0.25
RPH3A-217ENST00000549913 ABCC11Q96J66 1382 aa13.46□□□□□ -0.25
RPH3A-217ENST00000549913 LRPPRCP42704 1394 aaKnown RBP13.46□□□□□ -0.26
RPH3A-217ENST00000549913 DHX16O60231 1041 aaKnown RBP13.45□□□□□ -0.26
RPH3A-217ENST00000549913 RBM10P98175 930 aaKnown RBP13.45□□□□□ -0.26
RPH3A-217ENST00000549913 KINO60870 393 aaKnown RBP13.45□□□□□ -0.26
RPH3A-217ENST00000549913 TBC1D2BQ9UPU7 963 aa13.44□□□□□ -0.26
RPH3A-217ENST00000549913 CYP46A1Q9Y6A2 500 aa13.44□□□□□ -0.26
RPH3A-217ENST00000549913 MAPKBP1O60336 1514 aa13.44□□□□□ -0.26
RPH3A-217ENST00000549913 CCDC192P0DO97 292 aa13.44□□□□□ -0.26
RPH3A-217ENST00000549913 AEBP1Q8IUX7 1158 aa13.44□□□□□ -0.26
RPH3A-217ENST00000549913 SSH1Q8WYL5 1049 aa13.44□□□□□ -0.26
RPH3A-217ENST00000549913 OLFM4Q6UX06 510 aa13.44□□□□□ -0.26
RPH3A-217ENST00000549913 PCMTD1Q96MG8 357 aaPredicted RBP13.44□□□□□ -0.26
RPH3A-217ENST00000549913 ADGRF5Q8IZF2 1346 aa13.44□□□□□ -0.26
RPH3A-217ENST00000549913 URB2Q14146 1524 aaKnown RBP13.43□□□□□ -0.26
RPH3A-217ENST00000549913 TBC1D2Q9BYX2 928 aa13.43□□□□□ -0.26
RPH3A-217ENST00000549913 SRGAP3O43295 1099 aa13.43□□□□□ -0.26
RPH3A-217ENST00000549913 ALDH1L2Q3SY69 923 aa13.43□□□□□ -0.26
RPH3A-217ENST00000549913 TRIM34Q9BYJ4 488 aa13.43□□□□□ -0.26
RPH3A-217ENST00000549913 RAD21O60216 631 aa13.42□□□□□ -0.26
RPH3A-217ENST00000549913 THUMPD2Q9BTF0 503 aaKnown RBP13.42□□□□□ -0.26
RPH3A-217ENST00000549913 ADGRL1O94910 1474 aa13.42□□□□□ -0.26
RPH3A-217ENST00000549913 SCAF11Q99590 1463 aaKnown RBP13.42□□□□□ -0.26
RPH3A-217ENST00000549913 XBP1P17861 261 aa13.42□□□□□ -0.26
RPH3A-217ENST00000549913 SART3Q15020 963 aaKnown RBP13.42□□□□□ -0.26
RPH3A-217ENST00000549913 SPC24Q8NBT2 197 aa13.42□□□□□ -0.26
RPH3A-217ENST00000549913 SETQ01105 290 aaPredicted RBP13.42□□□□□ -0.26
RPH3A-217ENST00000549913 ANKRD1Q15327 319 aa13.42□□□□□ -0.26
RPH3A-217ENST00000549913 ZSCAN30Q86W11 494 aa13.42□□□□□ -0.26
RPH3A-217ENST00000549913 CD109Q6YHK3 1445 aa13.41□□□□□ -0.26
RPH3A-217ENST00000549913 PRKCSHP14314 528 aaPredicted RBP13.41□□□□□ -0.26
RPH3A-217ENST00000549913 RBM33Q96EV2 1170 aaKnown RBP13.41□□□□□ -0.26
RPH3A-217ENST00000549913 BCL11BQ9C0K0 894 aaPredicted RBP13.41□□□□□ -0.26
RPH3A-217ENST00000549913 KIF6Q6ZMV9 814 aa13.41□□□□□ -0.26
RPH3A-217ENST00000549913 KRT85P78386 507 aa13.41□□□□□ -0.26
RPH3A-217ENST00000549913 ZNF396Q96N95 335 aaPredicted RBP13.41□□□□□ -0.26
RPH3A-217ENST00000549913 BRMS1Q9HCU9 246 aa13.41□□□□□ -0.26
RPH3A-217ENST00000549913 WAPLQ7Z5K2 1190 aa13.41□□□□□ -0.26
RPH3A-217ENST00000549913 RRP9O43818 475 aaKnown RBP13.4□□□□□ -0.26
RPH3A-217ENST00000549913 PDE4CQ08493 712 aa13.4□□□□□ -0.26
RPH3A-217ENST00000549913 CCDC158Q5M9N0 1113 aa13.4□□□□□ -0.26
RPH3A-217ENST00000549913 SIL1Q9H173 461 aa13.4□□□□□ -0.26
RPH3A-217ENST00000549913 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
RPH3A-217ENST00000549913 TNMDQ9H2S6 317 aa13.4□□□□□ -0.27
RPH3A-217ENST00000549913 IL1RAPL2Q9NP60 686 aa13.4□□□□□ -0.27
RPH3A-217ENST00000549913 FAM135AQ9P2D6 1515 aa13.4□□□□□ -0.27
RPH3A-217ENST00000549913 SMC2O95347 1197 aa13.39□□□□□ -0.27
RPH3A-217ENST00000549913 CABP4P57796 275 aa13.39□□□□□ -0.27
RPH3A-217ENST00000549913 NCBP3Q53F19 620 aaKnown RBP13.39□□□□□ -0.27
RPH3A-217ENST00000549913 LARP1BQ659C4 914 aaKnown RBP13.39□□□□□ -0.27
RPH3A-217ENST00000549913 ANKLE2Q86XL3 938 aa13.39□□□□□ -0.27
RPH3A-217ENST00000549913 MPNDQ8N594 471 aa13.39□□□□□ -0.27
RPH3A-217ENST00000549913 PDILTQ8N807 584 aa13.39□□□□□ -0.27
RPH3A-217ENST00000549913 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
RPH3A-217ENST00000549913 GNAT3A8MTJ3 354 aa13.39□□□□□ -0.27
RPH3A-217ENST00000549913 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
RPH3A-217ENST00000549913 UQCRHLA0A096LP55 91 aa13.39□□□□□ -0.27
RPH3A-217ENST00000549913 MAP4K4O95819 1239 aaPredicted RBP13.39□□□□□ -0.27
RPH3A-217ENST00000549913 UQCRHP07919 91 aa13.39□□□□□ -0.27
RPH3A-217ENST00000549913 ACBD3Q9H3P7 528 aa13.39□□□□□ -0.27
RPH3A-217ENST00000549913 THOC2Q8NI27 1593 aaKnown RBP13.38□□□□□ -0.27
RPH3A-217ENST00000549913 FYB1O15117 783 aa13.38□□□□□ -0.27
RPH3A-217ENST00000549913 ZSCAN31Q96LW9 406 aaPredicted RBP13.38□□□□□ -0.27
RPH3A-217ENST00000549913 FMNL2Q96PY5 1086 aa13.38□□□□□ -0.27
RPH3A-217ENST00000549913 GPATCH8Q9UKJ3 1502 aaKnown RBP13.38□□□□□ -0.27
RPH3A-217ENST00000549913 CEBPZQ03701 1054 aaKnown RBP13.38□□□□□ -0.27
RPH3A-217ENST00000549913 AACSQ86V21 672 aa13.38□□□□□ -0.27
RPH3A-217ENST00000549913 EXOC6BQ9Y2D4 811 aa13.38□□□□□ -0.27
RPH3A-217ENST00000549913 DISP3Q9P2K9 1392 aa13.38□□□□□ -0.27
RPH3A-217ENST00000549913 BTBD11A6QL63 1104 aa13.38□□□□□ -0.27
RPH3A-217ENST00000549913 STK38Q15208 465 aa13.38□□□□□ -0.27
RPH3A-217ENST00000549913 BLOC1S2Q6QNY1 142 aa13.38□□□□□ -0.27
RPH3A-217ENST00000549913 POGZQ7Z3K3 1410 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 CCP110O43303 1012 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 IGHDP01880 384 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 IDI1Q13907 227 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 HSP90B2PQ58FF3 399 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 MCM10Q7L590 875 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 PTPRKQ15262 1439 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 NSD2O96028 1365 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 CNNM1Q9NRU3 951 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 SYCE3A1L190 88 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 TTC39AQ5SRH9 613 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 PDRG1Q9NUG6 133 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 MYL6BP14649 208 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 NME9Q86XW9 330 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.37□□□□□ -0.27
RPH3A-217ENST00000549913 STRN4Q9NRL3 753 aa13.37□□□□□ -0.27
RPH3A-217ENST00000549913 FAM177BA6PVY3 158 aa13.36□□□□□ -0.27
RPH3A-217ENST00000549913 STK3Q13188 491 aa13.36□□□□□ -0.27
RPH3A-217ENST00000549913 DCTN1Q14203 1278 aa13.36□□□□□ -0.27
RPH3A-217ENST00000549913 TNPO1Q92973 898 aaKnown RBP13.36□□□□□ -0.27
RPH3A-217ENST00000549913 TRIM27P14373 513 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms