RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 HSP90AB2PQ58FF8 381 aa32.2■■■□□ 2.74
TGFBR1-207ENST00000549766 MSH6P52701 1360 aa32.19■■■□□ 2.74
TGFBR1-207ENST00000549766 NUTM2GQ5VZR2 741 aa32.19■■■□□ 2.74
TGFBR1-207ENST00000549766 SOX12O15370 315 aa32.18■■■□□ 2.74
TGFBR1-207ENST00000549766 RGPD1P0DJD0 1748 aa32.18■■■□□ 2.74
TGFBR1-207ENST00000549766 HMOX1P09601 288 aa32.17■■■□□ 2.74
TGFBR1-207ENST00000549766 RRP1P56182 461 aaKnown RBP32.17■■■□□ 2.74
TGFBR1-207ENST00000549766 TRIM35Q9UPQ4 493 aa32.17■■■□□ 2.74
TGFBR1-207ENST00000549766 ZNF335Q9H4Z2 1342 aaPredicted RBP32.16■■■□□ 2.74
TGFBR1-207ENST00000549766 NFAT5O94916 1531 aa32.15■■■□□ 2.74
TGFBR1-207ENST00000549766 KRT28Q7Z3Y7 464 aa32.13■■■□□ 2.73
TGFBR1-207ENST00000549766 NEFMP07197 916 aa32.11■■■□□ 2.73
TGFBR1-207ENST00000549766 AMPHP49418 695 aa32.11■■■□□ 2.73
TGFBR1-207ENST00000549766 PHACTR3Q96KR7 559 aa32.11■■■□□ 2.73
TGFBR1-207ENST00000549766 RTL1A6NKG5 1358 aa32.11■■■□□ 2.73
TGFBR1-207ENST00000549766 RIPK4P57078 832 aa32.11■■■□□ 2.73
TGFBR1-207ENST00000549766 SLIT3O75094 1523 aa32.11■■■□□ 2.73
TGFBR1-207ENST00000549766 KCNH5Q8NCM2 988 aa32.1■■■□□ 2.73
TGFBR1-207ENST00000549766 ARHGEF10O15013 1369 aa32.09■■■□□ 2.73
TGFBR1-207ENST00000549766 HOXC9P31274 260 aa32.09■■■□□ 2.73
TGFBR1-207ENST00000549766 XPCQ01831 940 aaPredicted RBP32.09■■■□□ 2.73
TGFBR1-207ENST00000549766 NFE2L2Q16236 605 aa32.09■■■□□ 2.73
TGFBR1-207ENST00000549766 USP19O94966 1318 aa32.07■■■□□ 2.73
TGFBR1-207ENST00000549766 IL16Q14005 1332 aa32.07■■■□□ 2.73
TGFBR1-207ENST00000549766 PHRF1Q9P1Y6 1649 aaKnown RBP32.07■■■□□ 2.72
TGFBR1-207ENST00000549766 ALS2Q96Q42 1657 aa32.06■■■□□ 2.72
TGFBR1-207ENST00000549766 SULT6B1Q6IMI4 303 aa32.05■■■□□ 2.72
TGFBR1-207ENST00000549766 AEBP1Q8IUX7 1158 aa32.05■■■□□ 2.72
TGFBR1-207ENST00000549766 PPP4R2Q9NY27 417 aa32.04■■■□□ 2.72
TGFBR1-207ENST00000549766 IGSF1Q8N6C5 1336 aa32.04■■■□□ 2.72
TGFBR1-207ENST00000549766 KDRP35968 1356 aa32.04■■■□□ 2.72
TGFBR1-207ENST00000549766 LTN1O94822 1766 aa32.04■■■□□ 2.72
TGFBR1-207ENST00000549766 MYH16Q9H6N6 1097 aa32.03■■■□□ 2.72
TGFBR1-207ENST00000549766 NPHP3Q7Z494 1330 aa32.02■■■□□ 2.72
TGFBR1-207ENST00000549766 IP6K1Q92551 441 aa32.01■■■□□ 2.71
TGFBR1-207ENST00000549766 GCP02774 474 aa32■■■□□ 2.71
TGFBR1-207ENST00000549766 EYA1Q99502 592 aa31.99■■■□□ 2.71
TGFBR1-207ENST00000549766 PXDNQ92626 1479 aa31.99■■■□□ 2.71
TGFBR1-207ENST00000549766 BRINP3Q76B58 766 aa31.96■■■□□ 2.71
TGFBR1-207ENST00000549766 ARHGEF25Q86VW2 580 aa31.96■■■□□ 2.71
TGFBR1-207ENST00000549766 DDX17Q92841 729 aaKnown RBP31.95■■■□□ 2.71
TGFBR1-207ENST00000549766 FANCIQ9NVI1 1328 aa31.95■■■□□ 2.71
TGFBR1-207ENST00000549766 LMOD3Q0VAK6 560 aa31.94■■■□□ 2.7
TGFBR1-207ENST00000549766 MED1Q15648 1581 aaPredicted RBP31.94■■■□□ 2.7
TGFBR1-207ENST00000549766 DLG5Q8TDM6 1919 aa31.93■■■□□ 2.7
TGFBR1-207ENST00000549766 LMOD2Q6P5Q4 547 aa31.93■■■□□ 2.7
TGFBR1-207ENST00000549766 SLAIN2Q9P270 581 aa31.93■■■□□ 2.7
TGFBR1-207ENST00000549766 TNS3Q68CZ2 1445 aa31.93■■■□□ 2.7
TGFBR1-207ENST00000549766 PLIN1O60240 522 aa31.92■■■□□ 2.7
TGFBR1-207ENST00000549766 CALD1Q05682 793 aaKnown RBP31.91■■■□□ 2.7
TGFBR1-207ENST00000549766 CT47B1P0C2W7 299 aaPredicted RBP31.9■■■□□ 2.7
TGFBR1-207ENST00000549766 CERKQ8TCT0 537 aa31.89■■■□□ 2.7
TGFBR1-207ENST00000549766 SPATA31A3Q5VYP0 1347 aa31.89■■■□□ 2.7
TGFBR1-207ENST00000549766 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.89■■■□□ 2.7
TGFBR1-207ENST00000549766 TSR2Q969E8 191 aaKnown RBP31.89■■■□□ 2.7
TGFBR1-207ENST00000549766 BCAR3O75815 825 aa31.87■■■□□ 2.69
TGFBR1-207ENST00000549766 RARSP54136 660 aaKnown RBP31.86■■■□□ 2.69
TGFBR1-207ENST00000549766 ZNF853P0CG23 659 aa31.86■■■□□ 2.69
TGFBR1-207ENST00000549766 EXOC6Q8TAG9 804 aa31.84■■■□□ 2.69
TGFBR1-207ENST00000549766 IFT57Q9NWB7 429 aa31.84■■■□□ 2.69
TGFBR1-207ENST00000549766 SOS2Q07890 1332 aaPredicted RBP31.84■■■□□ 2.69
TGFBR1-207ENST00000549766 LTV1Q96GA3 475 aaPredicted RBP31.83■■■□□ 2.69
TGFBR1-207ENST00000549766 THUMPD2Q9BTF0 503 aaKnown RBP31.83■■■□□ 2.69
TGFBR1-207ENST00000549766 CRYBG1Q9Y4K1 1723 aa31.83■■■□□ 2.69
TGFBR1-207ENST00000549766 EXOSC9Q06265 439 aaKnown RBP31.83■■■□□ 2.69
TGFBR1-207ENST00000549766 MTHFSDQ2M296 383 aaKnown RBP31.82■■■□□ 2.68
TGFBR1-207ENST00000549766 FAM83GA6ND36 823 aa31.81■■■□□ 2.68
TGFBR1-207ENST00000549766 GNAI1P63096 354 aa31.81■■■□□ 2.68
TGFBR1-207ENST00000549766 C20orf194Q5TEA3 1177 aa31.81■■■□□ 2.68
TGFBR1-207ENST00000549766 NCAPD2Q15021 1401 aa31.81■■■□□ 2.68
TGFBR1-207ENST00000549766 NBPF6Q5VWK0 638 aa31.8■■■□□ 2.68
TGFBR1-207ENST00000549766 B4GALNT3Q6L9W6 998 aa31.8■■■□□ 2.68
TGFBR1-207ENST00000549766 NBPF4Q96M43 638 aa31.8■■■□□ 2.68
TGFBR1-207ENST00000549766 GAS2L2Q8NHY3 880 aa31.79■■■□□ 2.68
TGFBR1-207ENST00000549766 CFAP44Q96MT7 982 aa31.79■■■□□ 2.68
TGFBR1-207ENST00000549766 ZBTB7CA1YPR0 619 aa31.77■■■□□ 2.68
TGFBR1-207ENST00000549766 DCTN1Q14203 1278 aa31.76■■■□□ 2.68
TGFBR1-207ENST00000549766 CRBNQ96SW2 442 aa31.76■■■□□ 2.68
TGFBR1-207ENST00000549766 AXIN2Q9Y2T1 843 aa31.76■■■□□ 2.68
TGFBR1-207ENST00000549766 CAMTA1Q9Y6Y1 1673 aa31.76■■■□□ 2.67
TGFBR1-207ENST00000549766 ABCC6O95255 1503 aa31.76■■■□□ 2.67
TGFBR1-207ENST00000549766 LTBP4Q8N2S1 1624 aa31.76■■■□□ 2.67
TGFBR1-207ENST00000549766 NHSL1Q5SYE7 1610 aa31.75■■■□□ 2.67
TGFBR1-207ENST00000549766 PLEKHG5O94827 1062 aa31.75■■■□□ 2.67
TGFBR1-207ENST00000549766 PELP1Q8IZL8 1130 aaKnown RBP31.75■■■□□ 2.67
TGFBR1-207ENST00000549766 COL18A1P39060 1754 aa31.73■■■□□ 2.67
TGFBR1-207ENST00000549766 ZC3H6P61129 1189 aaKnown RBP31.73■■■□□ 2.67
TGFBR1-207ENST00000549766 ANKRD24Q8TF21 1146 aa31.73■■■□□ 2.67
TGFBR1-207ENST00000549766 MBIPQ9NS73 344 aa31.73■■■□□ 2.67
TGFBR1-207ENST00000549766 CPDO75976 1380 aa31.73■■■□□ 2.67
TGFBR1-207ENST00000549766 HTATSF1O43719 755 aaKnown RBP31.73■■■□□ 2.67
TGFBR1-207ENST00000549766 PDE3AQ14432 1141 aa31.73■■■□□ 2.67
TGFBR1-207ENST00000549766 USHBP1Q8N6Y0 703 aa31.73■■■□□ 2.67
TGFBR1-207ENST00000549766 LAS1LQ9Y4W2 734 aaKnown RBP31.72■■■□□ 2.67
TGFBR1-207ENST00000549766 RGPD2P0DJD1 1756 aa31.72■■■□□ 2.67
TGFBR1-207ENST00000549766 CRB1P82279 1406 aa31.72■■■□□ 2.67
TGFBR1-207ENST00000549766 MCM10Q7L590 875 aa31.7■■■□□ 2.67
TGFBR1-207ENST00000549766 CABLES1Q8TDN4 633 aa31.7■■■□□ 2.67
TGFBR1-207ENST00000549766 LRRC59Q96AG4 307 aaKnown RBP31.7■■■□□ 2.67
TGFBR1-207ENST00000549766 CCDC136Q96JN2 1154 aa31.7■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms