RNA–Protein interactions for RNA: ENST00000549400.1

PTPRB-207, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 4

Gene PTPRB, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-207ENST00000549400 IPO4Q8TEX9 1081 aaKnown RBP5.22□□□□□ -1.57
PTPRB-207ENST00000549400 SIN3AQ96ST3 1273 aa5.22□□□□□ -1.57
PTPRB-207ENST00000549400 NAP1L2Q9ULW6 460 aaPredicted RBP5.22□□□□□ -1.57
PTPRB-207ENST00000549400 MYO5CQ9NQX4 1742 aa5.22□□□□□ -1.57
PTPRB-207ENST00000549400 ZCCHC11Q5TAX3 1644 aaKnown RBP5.22□□□□□ -1.57
PTPRB-207ENST00000549400 ABCC1P33527 1531 aa5.22□□□□□ -1.57
PTPRB-207ENST00000549400 ANKRD50Q9ULJ7 1429 aa5.22□□□□□ -1.57
PTPRB-207ENST00000549400 ZNF644Q9H582 1327 aaPredicted RBP5.22□□□□□ -1.57
PTPRB-207ENST00000549400 WDR7Q9Y4E6 1490 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 POLR1AO95602 1720 aaPredicted RBP5.21□□□□□ -1.58
PTPRB-207ENST00000549400 SPDYE16A6NNV3 312 aaPredicted RBP5.21□□□□□ -1.58
PTPRB-207ENST00000549400 TNFRSF10AO00220 468 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 SLC4A3P48751 1232 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 MFAP1P55081 439 aaKnown RBP5.21□□□□□ -1.58
PTPRB-207ENST00000549400 PRR20EP86478 221 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 PRR20CP86479 221 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 PRR20DP86480 221 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 PRR20BP86481 221 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 PRR20AP86496 221 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 CCDC27Q2M243 656 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 ZNF697Q5TEC3 545 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 ILDR2Q71H61 639 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 SLF2Q8IX21 1173 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 MPHOSPH9Q99550 1183 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 CFDP1Q9UEE9 299 aaPredicted RBP5.21□□□□□ -1.58
PTPRB-207ENST00000549400 PLCH2O75038 1416 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 NEURL4Q96JN8 1562 aa5.21□□□□□ -1.58
PTPRB-207ENST00000549400 IQGAP3Q86VI3 1631 aa5.2□□□□□ -1.58
PTPRB-207ENST00000549400 ABCA9Q8IUA7 1624 aa5.2□□□□□ -1.58
PTPRB-207ENST00000549400 SYCP2Q9BX26 1530 aa5.2□□□□□ -1.58
PTPRB-207ENST00000549400 PLEKHD1A6NEE1 506 aa5.2□□□□□ -1.58
PTPRB-207ENST00000549400 ST8SIA5O15466 376 aa5.2□□□□□ -1.58
PTPRB-207ENST00000549400 WFS1O76024 890 aa5.2□□□□□ -1.58
PTPRB-207ENST00000549400 PDIA6Q15084 440 aa5.2□□□□□ -1.58
PTPRB-207ENST00000549400 SWT1Q5T5J6 900 aaKnown RBP5.2□□□□□ -1.58
PTPRB-207ENST00000549400 CCDC125Q86Z20 511 aa5.2□□□□□ -1.58
PTPRB-207ENST00000549400 PCDHB3Q9Y5E6 796 aa5.2□□□□□ -1.58
PTPRB-207ENST00000549400 ERBINQ96RT1 1412 aa5.2□□□□□ -1.58
PTPRB-207ENST00000549400 DEPDC5O75140 1603 aa5.19□□□□□ -1.58
PTPRB-207ENST00000549400 APBB1O00213 710 aa5.19□□□□□ -1.58
PTPRB-207ENST00000549400 PPEF1O14829 653 aaPredicted RBP5.19□□□□□ -1.58
PTPRB-207ENST00000549400 NCLP19338 710 aaKnown RBP5.19□□□□□ -1.58
PTPRB-207ENST00000549400 GRIPAP1Q4V328 841 aa5.19□□□□□ -1.58
PTPRB-207ENST00000549400 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
PTPRB-207ENST00000549400 EMID1Q96A84 441 aaPredicted RBP5.19□□□□□ -1.58
PTPRB-207ENST00000549400 AAASQ9NRG9 546 aa5.19□□□□□ -1.58
PTPRB-207ENST00000549400 STK17AQ9UEE5 414 aa5.19□□□□□ -1.58
PTPRB-207ENST00000549400 RTEL1-TNFRSF6BF6WH68 1400 aa5.19□□□□□ -1.58
PTPRB-207ENST00000549400 INO80Q9ULG1 1556 aaPredicted RBP5.19□□□□□ -1.58
PTPRB-207ENST00000549400 FANCIQ9NVI1 1328 aa5.19□□□□□ -1.58
PTPRB-207ENST00000549400 RALGAPBQ86X10 1494 aa5.19□□□□□ -1.58
PTPRB-207ENST00000549400 LAMC1P11047 1609 aa5.19□□□□□ -1.58
PTPRB-207ENST00000549400 ZFYVE16Q7Z3T8 1539 aa5.18□□□□□ -1.58
PTPRB-207ENST00000549400 DUOX2Q9NRD8 1548 aa5.18□□□□□ -1.58
PTPRB-207ENST00000549400 KIF15Q9NS87 1388 aa5.18□□□□□ -1.58
PTPRB-207ENST00000549400 VWDEQ8N2E2 1590 aa5.18□□□□□ -1.58
PTPRB-207ENST00000549400 GRXCR2A6NFK2 248 aa5.18□□□□□ -1.58
PTPRB-207ENST00000549400 NEUROD2Q15784 382 aa5.18□□□□□ -1.58
PTPRB-207ENST00000549400 ANKLE1Q8NAG6 615 aa5.18□□□□□ -1.58
PTPRB-207ENST00000549400 PRR14Q9BWN1 585 aa5.18□□□□□ -1.58
PTPRB-207ENST00000549400 RRP7BPQ9NSQ0 103 aa5.18□□□□□ -1.58
PTPRB-207ENST00000549400 FAM135AQ9P2D6 1515 aa5.18□□□□□ -1.58
PTPRB-207ENST00000549400 EIF2AK4Q9P2K8 1649 aaKnown RBP5.17□□□□□ -1.58
PTPRB-207ENST00000549400 E9PSI1 815 aa5.17□□□□□ -1.58
PTPRB-207ENST00000549400 CCER2I3L3R5 266 aa5.17□□□□□ -1.58
PTPRB-207ENST00000549400 GDF9O60383 454 aa5.17□□□□□ -1.58
PTPRB-207ENST00000549400 INSM1Q01101 510 aaPredicted RBP5.17□□□□□ -1.58
PTPRB-207ENST00000549400 LIAT1Q6ZQX7 453 aa5.17□□□□□ -1.58
PTPRB-207ENST00000549400 PRDM10Q9NQV6 1147 aa5.17□□□□□ -1.58
PTPRB-207ENST00000549400 USP35Q9P2H5 1018 aa5.17□□□□□ -1.58
PTPRB-207ENST00000549400 ARHGAP5Q13017 1502 aa5.17□□□□□ -1.58
PTPRB-207ENST00000549400 BCORL1Q5H9F3 1711 aa5.17□□□□□ -1.58
PTPRB-207ENST00000549400 GPRASP1Q5JY77 1395 aa5.16□□□□□ -1.58
PTPRB-207ENST00000549400 KDM5CP41229 1560 aa5.16□□□□□ -1.58
PTPRB-207ENST00000549400 PLA2R1Q13018 1463 aa5.16□□□□□ -1.58
PTPRB-207ENST00000549400 C11orf95C9JLR9 678 aaPredicted RBP5.16□□□□□ -1.58
PTPRB-207ENST00000549400 MAFGO15525 162 aa5.16□□□□□ -1.58
PTPRB-207ENST00000549400 TMCO4Q5TGY1 634 aa5.16□□□□□ -1.58
PTPRB-207ENST00000549400 BLOC1S3Q6QNY0 202 aa5.16□□□□□ -1.58
PTPRB-207ENST00000549400 FTSJ3Q8IY81 847 aaKnown RBP5.16□□□□□ -1.58
PTPRB-207ENST00000549400 CNPY4Q8N129 248 aa5.16□□□□□ -1.58
PTPRB-207ENST00000549400 IGSF5Q9NSI5 407 aa5.16□□□□□ -1.58
PTPRB-207ENST00000549400 RBM27Q9P2N5 1060 aaKnown RBP5.16□□□□□ -1.58
PTPRB-207ENST00000549400 RBM19Q9Y4C8 960 aaKnown RBP5.16□□□□□ -1.58
PTPRB-207ENST00000549400 SUPT16HQ9Y5B9 1047 aaKnown RBP5.16□□□□□ -1.58
PTPRB-207ENST00000549400 PRDM15P57071 1507 aaPredicted RBP5.16□□□□□ -1.58
PTPRB-207ENST00000549400 LMTK2Q8IWU2 1503 aa5.15□□□□□ -1.58
PTPRB-207ENST00000549400 RRP9O43818 475 aaKnown RBP5.15□□□□□ -1.59
PTPRB-207ENST00000549400 TLL1O43897 1013 aa5.15□□□□□ -1.59
PTPRB-207ENST00000549400 S1PR4O95977 384 aa5.15□□□□□ -1.59
PTPRB-207ENST00000549400 SETQ01105 290 aaPredicted RBP5.15□□□□□ -1.59
PTPRB-207ENST00000549400 FOXC1Q12948 553 aa5.15□□□□□ -1.59
PTPRB-207ENST00000549400 LMOD2Q6P5Q4 547 aa5.15□□□□□ -1.59
PTPRB-207ENST00000549400 L3MBTL2Q969R5 705 aa5.15□□□□□ -1.59
PTPRB-207ENST00000549400 CHIC2Q9UKJ5 165 aa5.15□□□□□ -1.59
PTPRB-207ENST00000549400 ARID4BQ4LE39 1312 aaPredicted RBP5.15□□□□□ -1.59
PTPRB-207ENST00000549400 RNF17Q9BXT8 1623 aaKnown RBP5.15□□□□□ -1.59
PTPRB-207ENST00000549400 PTPRTO14522 1441 aa5.14□□□□□ -1.59
PTPRB-207ENST00000549400 CNTLNQ9NXG0 1405 aa5.14□□□□□ -1.59
PTPRB-207ENST00000549400 PTMSP20962 102 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms