RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 C1orf167Q5SNV9 1468 aa11.01□□□□□ -0.65
DEPDC4-207ENST00000549249 TIE1P35590 1138 aa11.01□□□□□ -0.65
DEPDC4-207ENST00000549249 C14orf37Q86TY3 774 aa11.01□□□□□ -0.65
DEPDC4-207ENST00000549249 C19orf44Q9H6X5 657 aa11.01□□□□□ -0.65
DEPDC4-207ENST00000549249 TRPC6Q9Y210 931 aa11.01□□□□□ -0.65
DEPDC4-207ENST00000549249 CGNL1Q0VF96 1302 aa11.01□□□□□ -0.65
DEPDC4-207ENST00000549249 KIF1AQ12756 1690 aa11.01□□□□□ -0.65
DEPDC4-207ENST00000549249 PMFBP1Q8TBY8 1022 aa11□□□□□ -0.65
DEPDC4-207ENST00000549249 SCUBE2Q9NQ36 999 aa11□□□□□ -0.65
DEPDC4-207ENST00000549249 PIK3C2AO00443 1686 aa11□□□□□ -0.65
DEPDC4-207ENST00000549249 USP54Q70EL1 1684 aa10.99□□□□□ -0.65
DEPDC4-207ENST00000549249 TRPM3Q9HCF6 1732 aaPredicted RBP10.99□□□□□ -0.65
DEPDC4-207ENST00000549249 FYB1O15117 783 aa10.99□□□□□ -0.65
DEPDC4-207ENST00000549249 BRD4O60885 1362 aaPredicted RBP10.99□□□□□ -0.65
DEPDC4-207ENST00000549249 MSH6P52701 1360 aa10.99□□□□□ -0.65
DEPDC4-207ENST00000549249 PPP2R1AP30153 589 aa10.98□□□□□ -0.65
DEPDC4-207ENST00000549249 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.98□□□□□ -0.65
DEPDC4-207ENST00000549249 GGNBP2Q9H3C7 697 aa10.98□□□□□ -0.65
DEPDC4-207ENST00000549249 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
DEPDC4-207ENST00000549249 MAP2P11137 1827 aaKnown RBP10.98□□□□□ -0.65
DEPDC4-207ENST00000549249 NLRP13Q86W25 1043 aa10.97□□□□□ -0.65
DEPDC4-207ENST00000549249 NME9Q86XW9 330 aa10.97□□□□□ -0.65
DEPDC4-207ENST00000549249 ORAI2Q96SN7 254 aa10.97□□□□□ -0.65
DEPDC4-207ENST00000549249 MRS2Q9HD23 443 aa10.97□□□□□ -0.65
DEPDC4-207ENST00000549249 TTC21BQ7Z4L5 1316 aa10.97□□□□□ -0.65
DEPDC4-207ENST00000549249 OVOS2A0A0J9YW53 1432 aa10.96□□□□□ -0.65
DEPDC4-207ENST00000549249 OVOS2Q6IE36 1432 aa10.96□□□□□ -0.65
DEPDC4-207ENST00000549249 MORC1Q86VD1 984 aa10.96□□□□□ -0.65
DEPDC4-207ENST00000549249 NGDNQ8NEJ9 315 aaKnown RBP10.96□□□□□ -0.65
DEPDC4-207ENST00000549249 SHPRHQ149N8 1683 aa10.95□□□□□ -0.66
DEPDC4-207ENST00000549249 POTEFA5A3E0 1075 aa10.95□□□□□ -0.66
DEPDC4-207ENST00000549249 ATF3P18847 181 aa10.95□□□□□ -0.66
DEPDC4-207ENST00000549249 ESCO1Q5FWF5 840 aa10.95□□□□□ -0.66
DEPDC4-207ENST00000549249 CADPS2Q86UW7 1296 aa10.95□□□□□ -0.66
DEPDC4-207ENST00000549249 ALS2Q96Q42 1657 aa10.95□□□□□ -0.66
DEPDC4-207ENST00000549249 TTC21AQ8NDW8 1320 aa10.94□□□□□ -0.66
DEPDC4-207ENST00000549249 GSE1Q14687 1217 aa10.94□□□□□ -0.66
DEPDC4-207ENST00000549249 SGIP1Q9BQI5 828 aa10.94□□□□□ -0.66
DEPDC4-207ENST00000549249 TTLL13PA6NNM8 815 aa10.93□□□□□ -0.66
DEPDC4-207ENST00000549249 TNNT2P45379 298 aaPredicted RBP10.93□□□□□ -0.66
DEPDC4-207ENST00000549249 CIZ1Q9ULV3 898 aaPredicted RBP10.93□□□□□ -0.66
DEPDC4-207ENST00000549249 USP31Q70CQ4 1352 aa10.92□□□□□ -0.66
DEPDC4-207ENST00000549249 PCDH10Q9P2E7 1040 aa10.92□□□□□ -0.66
DEPDC4-207ENST00000549249 COL3A1P02461 1466 aaPredicted RBP10.92□□□□□ -0.66
DEPDC4-207ENST00000549249 SMG6Q86US8 1419 aaKnown RBP10.92□□□□□ -0.66
DEPDC4-207ENST00000549249 NHSL1Q5SYE7 1610 aa10.91□□□□□ -0.66
DEPDC4-207ENST00000549249 FOXO3O43524 673 aa10.91□□□□□ -0.66
DEPDC4-207ENST00000549249 SEC24BO95487 1268 aa10.91□□□□□ -0.66
DEPDC4-207ENST00000549249 PYGBP11216 843 aa10.91□□□□□ -0.66
DEPDC4-207ENST00000549249 FBLN1P23142 703 aa10.91□□□□□ -0.66
DEPDC4-207ENST00000549249 PNISRQ8TF01 805 aaKnown RBP10.91□□□□□ -0.66
DEPDC4-207ENST00000549249 YTHDC1Q96MU7 727 aaKnown RBP10.91□□□□□ -0.66
DEPDC4-207ENST00000549249 PCDHB13Q9Y5F0 798 aa10.91□□□□□ -0.66
DEPDC4-207ENST00000549249 PEAK1Q9H792 1746 aa10.91□□□□□ -0.66
DEPDC4-207ENST00000549249 PXDNQ92626 1479 aa10.91□□□□□ -0.66
DEPDC4-207ENST00000549249 CRYBG1Q9Y4K1 1723 aa10.9□□□□□ -0.66
DEPDC4-207ENST00000549249 XPCQ01831 940 aaPredicted RBP10.9□□□□□ -0.66
DEPDC4-207ENST00000549249 BRINP3Q76B58 766 aa10.9□□□□□ -0.66
DEPDC4-207ENST00000549249 FAM9BQ8IZU0 186 aa10.9□□□□□ -0.66
DEPDC4-207ENST00000549249 DDX17Q92841 729 aaKnown RBP10.9□□□□□ -0.66
DEPDC4-207ENST00000549249 FAM163AQ96GL9 167 aaPredicted RBP10.9□□□□□ -0.66
DEPDC4-207ENST00000549249 COG3Q96JB2 828 aa10.9□□□□□ -0.66
DEPDC4-207ENST00000549249 AATKQ6ZMQ8 1374 aa10.9□□□□□ -0.67
DEPDC4-207ENST00000549249 MTHFSP49914 203 aa10.89□□□□□ -0.67
DEPDC4-207ENST00000549249 SLAIN2Q9P270 581 aa10.89□□□□□ -0.67
DEPDC4-207ENST00000549249 SLIT3O75094 1523 aa10.89□□□□□ -0.67
DEPDC4-207ENST00000549249 NFAT5O94916 1531 aa10.89□□□□□ -0.67
DEPDC4-207ENST00000549249 ROBO1Q9Y6N7 1651 aa10.89□□□□□ -0.67
DEPDC4-207ENST00000549249 LTN1O94822 1766 aa10.88□□□□□ -0.67
DEPDC4-207ENST00000549249 PSME1Q06323 249 aa10.88□□□□□ -0.67
DEPDC4-207ENST00000549249 KRT28Q7Z3Y7 464 aa10.88□□□□□ -0.67
DEPDC4-207ENST00000549249 POLKQ9UBT6 870 aa10.88□□□□□ -0.67
DEPDC4-207ENST00000549249 COLQQ9Y215 455 aaPredicted RBP10.88□□□□□ -0.67
DEPDC4-207ENST00000549249 PHRF1Q9P1Y6 1649 aaKnown RBP10.87□□□□□ -0.67
DEPDC4-207ENST00000549249 CDK12Q9NYV4 1490 aaPredicted RBP10.87□□□□□ -0.67
DEPDC4-207ENST00000549249 MED1Q15648 1581 aaPredicted RBP10.87□□□□□ -0.67
DEPDC4-207ENST00000549249 NUTM2GQ5VZR2 741 aa10.87□□□□□ -0.67
DEPDC4-207ENST00000549249 TRIM35Q9UPQ4 493 aa10.87□□□□□ -0.67
DEPDC4-207ENST00000549249 EMILIN1Q9Y6C2 1016 aa10.87□□□□□ -0.67
DEPDC4-207ENST00000549249 SBNO1A3KN83 1393 aa10.87□□□□□ -0.67
DEPDC4-207ENST00000549249 PNPLA6Q8IY17 1366 aa10.87□□□□□ -0.67
DEPDC4-207ENST00000549249 NPHP3Q7Z494 1330 aa10.86□□□□□ -0.67
DEPDC4-207ENST00000549249 BLMP54132 1417 aaPredicted RBP10.86□□□□□ -0.67
DEPDC4-207ENST00000549249 NLRP6P59044 892 aa10.86□□□□□ -0.67
DEPDC4-207ENST00000549249 IER5LQ5T953 404 aa10.86□□□□□ -0.67
DEPDC4-207ENST00000549249 LCE2DQ5TA82 110 aaPredicted RBP10.86□□□□□ -0.67
DEPDC4-207ENST00000549249 ABTB2Q8N961 1025 aa10.86□□□□□ -0.67
DEPDC4-207ENST00000549249 INSRP06213 1382 aa10.86□□□□□ -0.67
DEPDC4-207ENST00000549249 ABCA3Q99758 1704 aa10.86□□□□□ -0.67
DEPDC4-207ENST00000549249 TNS3Q68CZ2 1445 aa10.85□□□□□ -0.67
DEPDC4-207ENST00000549249 AHDC1Q5TGY3 1603 aaPredicted RBP10.85□□□□□ -0.67
DEPDC4-207ENST00000549249 RRS1Q15050 365 aaKnown RBP10.85□□□□□ -0.67
DEPDC4-207ENST00000549249 USP19O94966 1318 aa10.84□□□□□ -0.67
DEPDC4-207ENST00000549249 RGPD1P0DJD0 1748 aa10.84□□□□□ -0.67
DEPDC4-207ENST00000549249 SOS2Q07890 1332 aaPredicted RBP10.84□□□□□ -0.67
DEPDC4-207ENST00000549249 MAP3K19Q56UN5 1328 aa10.84□□□□□ -0.67
DEPDC4-207ENST00000549249 RGPD5Q99666 1765 aa10.83□□□□□ -0.68
DEPDC4-207ENST00000549249 SOX12O15370 315 aa10.83□□□□□ -0.68
DEPDC4-207ENST00000549249 IFNL1Q8IU54 200 aa10.83□□□□□ -0.68
DEPDC4-207ENST00000549249 ADAMTS8Q9UP79 889 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms