RNA–Protein interactions for RNA: ENST00000549194.1

GNPTAB-204, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 570 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-204ENST00000549194 SHANK2Q9UPX8 1470 aa11.24□□□□□ -0.61
GNPTAB-204ENST00000549194 PLXNC1O60486 1568 aa11.24□□□□□ -0.61
GNPTAB-204ENST00000549194 MADDQ8WXG6 1647 aa11.24□□□□□ -0.61
GNPTAB-204ENST00000549194 CERKQ8TCT0 537 aa11.23□□□□□ -0.61
GNPTAB-204ENST00000549194 RPRD2Q5VT52 1461 aaKnown RBP11.23□□□□□ -0.61
GNPTAB-204ENST00000549194 RIMS1Q86UR5 1692 aaKnown RBP11.23□□□□□ -0.61
GNPTAB-204ENST00000549194 AGLP35573 1532 aa11.22□□□□□ -0.61
GNPTAB-204ENST00000549194 ERICH6Q7L0X2 663 aa11.22□□□□□ -0.61
GNPTAB-204ENST00000549194 NKX2-3Q8TAU0 364 aa11.22□□□□□ -0.61
GNPTAB-204ENST00000549194 ZC3H15Q8WU90 426 aaKnown RBP11.22□□□□□ -0.61
GNPTAB-204ENST00000549194 PRKRIP1Q9H875 184 aaPredicted RBP11.22□□□□□ -0.61
GNPTAB-204ENST00000549194 CDHR5Q9HBB8 845 aa11.22□□□□□ -0.61
GNPTAB-204ENST00000549194 TSKSQ9UJT2 592 aa11.22□□□□□ -0.61
GNPTAB-204ENST00000549194 POLR1AO95602 1720 aaPredicted RBP11.21□□□□□ -0.61
GNPTAB-204ENST00000549194 ANKRD30BQ9BXX2 1392 aa11.21□□□□□ -0.61
GNPTAB-204ENST00000549194 PRR20EP86478 221 aa11.21□□□□□ -0.61
GNPTAB-204ENST00000549194 PRR20CP86479 221 aa11.21□□□□□ -0.61
GNPTAB-204ENST00000549194 PRR20DP86480 221 aa11.21□□□□□ -0.61
GNPTAB-204ENST00000549194 PRR20BP86481 221 aa11.21□□□□□ -0.61
GNPTAB-204ENST00000549194 PRR20AP86496 221 aa11.21□□□□□ -0.61
GNPTAB-204ENST00000549194 PTGDRQ13258 359 aa11.21□□□□□ -0.61
GNPTAB-204ENST00000549194 MLECQ14165 292 aa11.21□□□□□ -0.61
GNPTAB-204ENST00000549194 BCL11AQ9H165 835 aa11.21□□□□□ -0.61
GNPTAB-204ENST00000549194 L3MBTL2Q969R5 705 aa11.2□□□□□ -0.62
GNPTAB-204ENST00000549194 NPDC1Q9NQX5 325 aaPredicted RBP11.2□□□□□ -0.62
GNPTAB-204ENST00000549194 LOC100996750A0A140TA64 210 aa11.19□□□□□ -0.62
GNPTAB-204ENST00000549194 GPR37O15354 613 aa11.19□□□□□ -0.62
GNPTAB-204ENST00000549194 HIC1Q14526 733 aa11.19□□□□□ -0.62
GNPTAB-204ENST00000549194 TPRNQ4KMQ1 711 aa11.19□□□□□ -0.62
GNPTAB-204ENST00000549194 KRTAP4-6Q9BYQ5 205 aa11.19□□□□□ -0.62
GNPTAB-204ENST00000549194 CHIC2Q9UKJ5 165 aa11.19□□□□□ -0.62
GNPTAB-204ENST00000549194 EIF2AK4Q9P2K8 1649 aaKnown RBP11.18□□□□□ -0.62
GNPTAB-204ENST00000549194 MRS2Q9HD23 443 aa11.18□□□□□ -0.62
GNPTAB-204ENST00000549194 DUOX2Q9NRD8 1548 aa11.18□□□□□ -0.62
GNPTAB-204ENST00000549194 SPATA31E1Q6ZUB1 1445 aa11.18□□□□□ -0.62
GNPTAB-204ENST00000549194 CLTCQ00610 1675 aaKnown RBP11.17□□□□□ -0.62
GNPTAB-204ENST00000549194 DHX29Q7Z478 1369 aaKnown RBP11.17□□□□□ -0.62
GNPTAB-204ENST00000549194 KIF15Q9NS87 1388 aa11.17□□□□□ -0.62
GNPTAB-204ENST00000549194 SLC19A1P41440 591 aa11.17□□□□□ -0.62
GNPTAB-204ENST00000549194 ADGRL2O95490 1459 aa11.17□□□□□ -0.62
GNPTAB-204ENST00000549194 ANKRD30AQ9BXX3 1397 aa11.16□□□□□ -0.62
GNPTAB-204ENST00000549194 GNPATO15228 680 aa11.16□□□□□ -0.62
GNPTAB-204ENST00000549194 SMG6Q86US8 1419 aaKnown RBP11.16□□□□□ -0.62
GNPTAB-204ENST00000549194 ZMYND10O75800 440 aa11.15□□□□□ -0.62
GNPTAB-204ENST00000549194 APLP1P51693 650 aa11.15□□□□□ -0.62
GNPTAB-204ENST00000549194 RNF17Q9BXT8 1623 aaKnown RBP11.15□□□□□ -0.62
GNPTAB-204ENST00000549194 MROH2AA6NES4 1674 aa11.14□□□□□ -0.63
GNPTAB-204ENST00000549194 C3P01024 1663 aa11.14□□□□□ -0.63
GNPTAB-204ENST00000549194 PTPRMP28827 1452 aa11.14□□□□□ -0.63
GNPTAB-204ENST00000549194 KIF3BO15066 747 aa11.14□□□□□ -0.63
GNPTAB-204ENST00000549194 PRSS12P56730 875 aa11.14□□□□□ -0.63
GNPTAB-204ENST00000549194 IRX6P78412 446 aaPredicted RBP11.14□□□□□ -0.63
GNPTAB-204ENST00000549194 GGT6Q6P531 493 aa11.14□□□□□ -0.63
GNPTAB-204ENST00000549194 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
GNPTAB-204ENST00000549194 ZNF598Q86UK7 904 aaKnown RBP11.14□□□□□ -0.63
GNPTAB-204ENST00000549194 RBM27Q9P2N5 1060 aaKnown RBP11.14□□□□□ -0.63
GNPTAB-204ENST00000549194 CFAP65Q6ZU64 1925 aaKnown RBP11.13□□□□□ -0.63
GNPTAB-204ENST00000549194 KIF7Q2M1P5 1343 aa11.13□□□□□ -0.63
GNPTAB-204ENST00000549194 CEP152O94986 1710 aa11.13□□□□□ -0.63
GNPTAB-204ENST00000549194 ERBINQ96RT1 1412 aa11.13□□□□□ -0.63
GNPTAB-204ENST00000549194 WFS1O76024 890 aa11.13□□□□□ -0.63
GNPTAB-204ENST00000549194 SPRYD7Q5W111 196 aa11.13□□□□□ -0.63
GNPTAB-204ENST00000549194 FAM9BQ8IZU0 186 aa11.13□□□□□ -0.63
GNPTAB-204ENST00000549194 NECTIN2Q92692 538 aa11.13□□□□□ -0.63
GNPTAB-204ENST00000549194 ESF1Q9H501 851 aaKnown RBP11.13□□□□□ -0.63
GNPTAB-204ENST00000549194 ROCK2O75116 1388 aaKnown RBP11.13□□□□□ -0.63
GNPTAB-204ENST00000549194 FAM187AA6NFU0 413 aa11.12□□□□□ -0.63
GNPTAB-204ENST00000549194 C11orf95C9JLR9 678 aaPredicted RBP11.12□□□□□ -0.63
GNPTAB-204ENST00000549194 SMAPO00193 183 aa11.12□□□□□ -0.63
GNPTAB-204ENST00000549194 INSM1Q01101 510 aaPredicted RBP11.12□□□□□ -0.63
GNPTAB-204ENST00000549194 NBPF8Q3BBV2 869 aa11.12□□□□□ -0.63
GNPTAB-204ENST00000549194 CDCA7LQ96GN5 454 aa11.12□□□□□ -0.63
GNPTAB-204ENST00000549194 DEPDC5O75140 1603 aa11.12□□□□□ -0.63
GNPTAB-204ENST00000549194 ZC3H13Q5T200 1668 aaKnown RBP11.11□□□□□ -0.63
GNPTAB-204ENST00000549194 MROH1Q8NDA8 1641 aa11.11□□□□□ -0.63
GNPTAB-204ENST00000549194 WIPF1O43516 503 aa11.11□□□□□ -0.63
GNPTAB-204ENST00000549194 CCDC184Q52MB2 194 aa11.11□□□□□ -0.63
GNPTAB-204ENST00000549194 RNF123Q5XPI4 1314 aa11.1□□□□□ -0.63
GNPTAB-204ENST00000549194 KDM5DQ9BY66 1539 aa11.1□□□□□ -0.63
GNPTAB-204ENST00000549194 KRI1Q8N9T8 703 aaKnown RBP11.1□□□□□ -0.63
GNPTAB-204ENST00000549194 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
GNPTAB-204ENST00000549194 NUDCQ9Y266 331 aa11.1□□□□□ -0.63
GNPTAB-204ENST00000549194 PZPP20742 1482 aa11.1□□□□□ -0.63
GNPTAB-204ENST00000549194 SETD1BQ9UPS6 1966 aaKnown RBP11.1□□□□□ -0.63
GNPTAB-204ENST00000549194 HDGFP51858 240 aaKnown RBP11.09□□□□□ -0.63
GNPTAB-204ENST00000549194 PADI6Q6TGC4 694 aa11.09□□□□□ -0.63
GNPTAB-204ENST00000549194 TTC13Q8NBP0 860 aa11.09□□□□□ -0.63
GNPTAB-204ENST00000549194 AAASQ9NRG9 546 aa11.09□□□□□ -0.63
GNPTAB-204ENST00000549194 PRDM15P57071 1507 aaPredicted RBP11.09□□□□□ -0.63
GNPTAB-204ENST00000549194 FAM135AQ9P2D6 1515 aa11.09□□□□□ -0.63
GNPTAB-204ENST00000549194 ANKRD50Q9ULJ7 1429 aa11.09□□□□□ -0.63
GNPTAB-204ENST00000549194 MINK1Q8N4C8 1332 aaPredicted RBP11.09□□□□□ -0.63
GNPTAB-204ENST00000549194 KTN1Q86UP2 1357 aaKnown RBP11.08□□□□□ -0.64
GNPTAB-204ENST00000549194 PRKCSHP14314 528 aaPredicted RBP11.08□□□□□ -0.64
GNPTAB-204ENST00000549194 COPS2P61201 443 aa11.08□□□□□ -0.64
GNPTAB-204ENST00000549194 CAMSAP1Q5T5Y3 1602 aa11.08□□□□□ -0.64
GNPTAB-204ENST00000549194 UHRF1BP1Q6BDS2 1440 aa11.08□□□□□ -0.64
GNPTAB-204ENST00000549194 NBPF26B4DH59 902 aa11.07□□□□□ -0.64
GNPTAB-204ENST00000549194 RNF223E7ERA6 249 aa11.07□□□□□ -0.64
GNPTAB-204ENST00000549194 RNF40O75150 1001 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms