RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 MCCP23508 829 aa17.4■□□□□ 0.38
CACNB3-209ENST00000548860 INTS3Q68E01 1043 aaKnown RBP17.4■□□□□ 0.38
CACNB3-209ENST00000548860 NUTM1Q86Y26 1132 aa17.4■□□□□ 0.38
CACNB3-209ENST00000548860 FGD1P98174 961 aa17.4■□□□□ 0.38
CACNB3-209ENST00000548860 GAS2L2Q8NHY3 880 aa17.4■□□□□ 0.38
CACNB3-209ENST00000548860 SURF6O75683 361 aaKnown RBP17.39■□□□□ 0.38
CACNB3-209ENST00000548860 NUCB1Q02818 461 aa17.39■□□□□ 0.38
CACNB3-209ENST00000548860 GCC1Q96CN9 775 aa17.39■□□□□ 0.38
CACNB3-209ENST00000548860 FOSBP53539 338 aa17.39■□□□□ 0.37
CACNB3-209ENST00000548860 RRAGDQ9NQL2 400 aaPredicted RBP17.39■□□□□ 0.37
CACNB3-209ENST00000548860 ZCCHC11Q5TAX3 1644 aaKnown RBP17.39■□□□□ 0.37
CACNB3-209ENST00000548860 NASPP49321 788 aaPredicted RBP17.38■□□□□ 0.37
CACNB3-209ENST00000548860 RBM27Q9P2N5 1060 aaKnown RBP17.38■□□□□ 0.37
CACNB3-209ENST00000548860 CD2BP2O95400 341 aaKnown RBP17.38■□□□□ 0.37
CACNB3-209ENST00000548860 ABTB2Q8N961 1025 aa17.37■□□□□ 0.37
CACNB3-209ENST00000548860 EID1Q9Y6B2 187 aa17.37■□□□□ 0.37
CACNB3-209ENST00000548860 INSRP06213 1382 aa17.37■□□□□ 0.37
CACNB3-209ENST00000548860 WASLO00401 505 aaPredicted RBP17.37■□□□□ 0.37
CACNB3-209ENST00000548860 MRE11P49959 708 aa17.37■□□□□ 0.37
CACNB3-209ENST00000548860 NINLQ9Y2I6 1382 aa17.36■□□□□ 0.37
CACNB3-209ENST00000548860 MRPL50Q8N5N7 158 aaKnown RBP17.36■□□□□ 0.37
CACNB3-209ENST00000548860 AAMPQ13685 434 aa17.36■□□□□ 0.37
CACNB3-209ENST00000548860 HDAC1Q13547 482 aaPredicted RBP17.36■□□□□ 0.37
CACNB3-209ENST00000548860 G2E3Q7L622 706 aa17.36■□□□□ 0.37
CACNB3-209ENST00000548860 PRDM15P57071 1507 aaPredicted RBP17.36■□□□□ 0.37
CACNB3-209ENST00000548860 HAP1P54257 671 aaPredicted RBP17.35■□□□□ 0.37
CACNB3-209ENST00000548860 RSPH6AQ9H0K4 717 aa17.35■□□□□ 0.37
CACNB3-209ENST00000548860 REC8O95072 547 aa17.35■□□□□ 0.37
CACNB3-209ENST00000548860 RBM10P98175 930 aaKnown RBP17.35■□□□□ 0.37
CACNB3-209ENST00000548860 SMC5Q8IY18 1101 aa17.35■□□□□ 0.37
CACNB3-209ENST00000548860 NPATQ14207 1427 aa17.35■□□□□ 0.37
CACNB3-209ENST00000548860 ZBTB7BO15156 539 aaPredicted RBP17.35■□□□□ 0.37
CACNB3-209ENST00000548860 ZGPATQ8N5A5 531 aaKnown RBP17.35■□□□□ 0.37
CACNB3-209ENST00000548860 EIF2AK4Q9P2K8 1649 aaKnown RBP17.34■□□□□ 0.37
CACNB3-209ENST00000548860 FAM43AQ8N2R8 423 aa17.34■□□□□ 0.37
CACNB3-209ENST00000548860 TEFQ10587 303 aa17.34■□□□□ 0.37
CACNB3-209ENST00000548860 CT47B1P0C2W7 299 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-209ENST00000548860 CSB-PGBD3P0DP91 1061 aa17.33■□□□□ 0.36
CACNB3-209ENST00000548860 CFAP44Q96MT7 982 aa17.33■□□□□ 0.36
CACNB3-209ENST00000548860 SDSP20132 328 aa17.32■□□□□ 0.36
CACNB3-209ENST00000548860 SIL1Q9H173 461 aa17.32■□□□□ 0.36
CACNB3-209ENST00000548860 ABCC1P33527 1531 aa17.32■□□□□ 0.36
CACNB3-209ENST00000548860 VSIG10Q8N0Z9 540 aa17.32■□□□□ 0.36
CACNB3-209ENST00000548860 C9orf78Q9NZ63 289 aaPredicted RBP17.32■□□□□ 0.36
CACNB3-209ENST00000548860 UBTFL1P0CB47 393 aaPredicted RBP17.32■□□□□ 0.36
CACNB3-209ENST00000548860 HDGFL1Q5TGJ6 251 aa17.31■□□□□ 0.36
CACNB3-209ENST00000548860 IFT57Q9NWB7 429 aa17.31■□□□□ 0.36
CACNB3-209ENST00000548860 FAM13BQ9NYF5 915 aa17.31■□□□□ 0.36
CACNB3-209ENST00000548860 ATP7AQ04656 1500 aa17.31■□□□□ 0.36
CACNB3-209ENST00000548860 VPS37CA5D8V6 355 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-209ENST00000548860 EIF4A2Q14240 407 aaKnown RBP17.31■□□□□ 0.36
CACNB3-209ENST00000548860 ALDH1L2Q3SY69 923 aa17.31■□□□□ 0.36
CACNB3-209ENST00000548860 PLEKHF1Q96S99 279 aa17.31■□□□□ 0.36
CACNB3-209ENST00000548860 PKP1Q13835 747 aa17.31■□□□□ 0.36
CACNB3-209ENST00000548860 BMP2KLQ5H9B9 411 aa17.31■□□□□ 0.36
CACNB3-209ENST00000548860 HSP90AA2PQ14568 343 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-209ENST00000548860 GLIPR1L2Q4G1C9 344 aa17.31■□□□□ 0.36
CACNB3-209ENST00000548860 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-209ENST00000548860 UNC13BO14795 1591 aa17.3■□□□□ 0.36
CACNB3-209ENST00000548860 SYCE3A1L190 88 aa17.3■□□□□ 0.36
CACNB3-209ENST00000548860 GOLGA6L4A6NEF3 574 aa17.3■□□□□ 0.36
CACNB3-209ENST00000548860 PPFIA3O75145 1194 aa17.3■□□□□ 0.36
CACNB3-209ENST00000548860 FBXW7Q969H0 707 aa17.3■□□□□ 0.36
CACNB3-209ENST00000548860 R3HCC1Q9Y3T6 440 aaKnown RBP17.3■□□□□ 0.36
CACNB3-209ENST00000548860 IQGAP3Q86VI3 1631 aa17.3■□□□□ 0.36
CACNB3-209ENST00000548860 ACEP12821 1306 aa17.3■□□□□ 0.36
CACNB3-209ENST00000548860 ESPNB1AK53 854 aa17.3■□□□□ 0.36
CACNB3-209ENST00000548860 GNAI2P04899 355 aa17.29■□□□□ 0.36
CACNB3-209ENST00000548860 LRRFIP2Q9Y608 721 aaKnown RBP17.29■□□□□ 0.36
CACNB3-209ENST00000548860 E9PCH4 1651 aa17.29■□□□□ 0.36
CACNB3-209ENST00000548860 FIBPO43427 364 aa17.29■□□□□ 0.36
CACNB3-209ENST00000548860 CLTCL1P53675 1640 aa17.29■□□□□ 0.36
CACNB3-209ENST00000548860 NPC1L1Q9UHC9 1359 aa17.29■□□□□ 0.36
CACNB3-209ENST00000548860 CWC27Q6UX04 472 aaKnown RBP17.28■□□□□ 0.36
CACNB3-209ENST00000548860 PSME1Q06323 249 aa17.28■□□□□ 0.36
CACNB3-209ENST00000548860 RABEP1Q15276 862 aa17.28■□□□□ 0.36
CACNB3-209ENST00000548860 SKOR2Q2VWA4 1001 aaPredicted RBP17.27■□□□□ 0.36
CACNB3-209ENST00000548860 PKNOX2Q96KN3 472 aa17.27■□□□□ 0.36
CACNB3-209ENST00000548860 ERC2O15083 957 aa17.27■□□□□ 0.36
CACNB3-209ENST00000548860 SRGAP3O43295 1099 aa17.27■□□□□ 0.36
CACNB3-209ENST00000548860 PLEKHM2Q8IWE5 1019 aa17.27■□□□□ 0.36
CACNB3-209ENST00000548860 DRC7Q8IY82 874 aa17.27■□□□□ 0.35
CACNB3-209ENST00000548860 DIAPH3Q9NSV4 1193 aa17.27■□□□□ 0.35
CACNB3-209ENST00000548860 KDM4AO75164 1064 aa17.26■□□□□ 0.35
CACNB3-209ENST00000548860 BAG4O95429 457 aaKnown RBP17.26■□□□□ 0.35
CACNB3-209ENST00000548860 NUCB2P80303 420 aa17.26■□□□□ 0.35
CACNB3-209ENST00000548860 LRRCC1Q9C099 1032 aa17.26■□□□□ 0.35
CACNB3-209ENST00000548860 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
CACNB3-209ENST00000548860 SPG7Q9UQ90 795 aa17.25■□□□□ 0.35
CACNB3-209ENST00000548860 ZFYVE16Q7Z3T8 1539 aa17.25■□□□□ 0.35
CACNB3-209ENST00000548860 ESCO1Q5FWF5 840 aa17.25■□□□□ 0.35
CACNB3-209ENST00000548860 ANTXR1Q9H6X2 564 aa17.25■□□□□ 0.35
CACNB3-209ENST00000548860 MTHFSDQ2M296 383 aaKnown RBP17.25■□□□□ 0.35
CACNB3-209ENST00000548860 GAS2L3Q86XJ1 694 aa17.25■□□□□ 0.35
CACNB3-209ENST00000548860 PIP4K2AP48426 406 aaPredicted RBP17.25■□□□□ 0.35
CACNB3-209ENST00000548860 GSPT1P15170 499 aaKnown RBP17.24■□□□□ 0.35
CACNB3-209ENST00000548860 IL13P35225 146 aa17.24■□□□□ 0.35
CACNB3-209ENST00000548860 TTC22Q5TAA0 569 aa17.24■□□□□ 0.35
CACNB3-209ENST00000548860 MPRIPQ6WCQ1 1025 aa17.24■□□□□ 0.35
CACNB3-209ENST00000548860 STK3Q13188 491 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms